Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe03g0038 | ATGGCGTCATCTGTTCTTTCGAATTCCGATCGCGCGCGGGAGTCTGCGAGGAAGCAAAAGAAGAAGAAAAGCTACGGCACCAACAGAGAACGTAATCAAAATCAGAACCATATCAAATGGAAATCTCAAGCTCAGCAAGAAATTTACTCCTCCAAACTGGTACGAGCTTTGAATCAAGTCCGGCTCAGTCCTTCCAATGAGGCGCCGCGCCGCGGCAGAGCCGTACGTGAGGCTGCGGATAGAGTCCTCGCCGTCGCCGCCAAGGGGAGAACCAGGTGGAGTCGAGCCATCTTAACGAACAGGCTGAAGCTCAAGTTCAGGAAGCCGAAGAGACAGAGACCATCCACCGCCGGAAACAACCGCGCAAAGAAACCTAGAGTCAGCGTATTGCGGTTGAAAGGGAAATCGTTACCGGCGGTGCAAAGGAAAGTTAGGGTTCTTGGCCGGCTAGTTCCCGGTTGCCGGAAAGAACCGTTGCCGATTATCCTGGAAGAGGCGACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCTATGAGTGCTCTCGCCGAATTGCTCTCGGCCTCAACTTCTGTTGCAGGCTCTAGCTCCTCCGCTCCCCCAAGCTGA | 612 | 53.59 | MASSVLSNSDRARESARKQKKKKSYGTNRERNQNQNHIKWKSQAQQEIYSSKLVRALNQVRLSPSNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRPSTAGNNRAKKPRVSVLRLKGKSLPAVQRKVRVLGRLVPGCRKEPLPIILEEATDYIAALEMQVRAMSALAELLSASTSVAGSSSSAPPS | 203 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 455090 | 455701 | - | Hsped.03g00380.1 | Hepe03g0038 | 565036 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe03g0038 | 203 | MobiDBLite | consensus disorder prediction | 106 | 125 | - | - | |
| Hepe03g0038 | 203 | MobiDBLite | consensus disorder prediction | 29 | 44 | - | - | |
| Hepe03g0038 | 203 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 143 | 191 | IPR036638 | GO:0046983(InterPro) | |
| Hepe03g0038 | 203 | CDD | bHLH_AtIBH1_like | 129 | 184 | IPR044549 | GO:0006355(InterPro) | |
| Hepe03g0038 | 203 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
| Hepe03g0038 | 203 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 37 | 187 | IPR044660 | GO:0006355(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe03g0038 | Hepe-Chr3:455090 | Hepe09g1735 | Hepe-Chr9:54330543 | 2.92e-39 | dispersed | |
| Hepe03g0038 | Hepe-Chr3:455090 | Hepe05g1370 | Hepe-Chr5:62364224 | 4.25e-75 | wgd | |
| Hepe03g0038 | Hepe-Chr3:455090 | Hepe08g2247 | Hepe-Chr8:62208133 | 3.25e-40 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe03g0038 | - | - | - | 0.0 |