Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0044 ATGGGAACTCCACCAGCAGCGGAGCTTCTGAGGAAGATCCAAGAGCTGGAGGAGGGTCAAGCTCATCTCAAGAAAGAGATGTCCAAACTTCTCCACTCTGGAACTGCTGCTGATTCCAACTCTGACCACCAAATCCATCATCATCATCATCACCATCAGCGCTCTCAATCTATATCGCCTCAGCGCTCTAGATTCGCTACGGCTAGGAGGAGAGGCGGCGCCGCTGCTGGAGGTTTAGACGGTGCCACAGCGGCGGCGTGGAAGAGAGGCTCTTCCTCATTTCGACATTCTTCTCCACTTCAGAGAGAGAGTAGGACTCGTGACCCTTTAAATGACGCCGCCGCCGGCTCTGGTCCTGCCGCCGTGAATTTCACCAATAAACAGTATCTCAATATCTTGCAGTCAATGGGACAGTCTGTTCATATTTTTGACCTTGATTATCGCATAATTTATTGGAACCGAGCTGCTGAAATTGTTTATGGATATTCTGCGGCGGAGGCTCTTGGCCAGGACGCCATTGAGCTTCTAGTCGATCCCGAGGACTTCGCCATTGCGAATGATGTATTTTGTCTTGTCATGGCGGGGGAGAATTGGACTGGTCACTTCCCTGTAAAGAACAAGATGGGGCAAAAATTTATAGTTGTTGCCACTAACTCTCCATTATATGACGACGACGCATTGGTCGGGATTATCTGTGTATCGAGCGATTTGCGGCCATTTCAAGAATTGAAGACTCCTTTTGCAGCAGGTTCTAAACAGCAGGATGCAAATTCAGGCATAGTCCCATCAAGAAGCACGGTTTCAACTAAACTTGGTCTTGATCCTCAGCAGCCTCTTCAAGTTGCAATTGCTTCAAAGTTATCGAACTTGGCATCAAAGGTAAGCAACAAAGTCAAGTCCAGAATTCGAACTGGAGAAAACAGCTCGGATCGTGAAGGTGGAAGTGGAGATAGTTATCACTCTGATCATGGCTATCCAGATGCAGTTCTTTGTGACCATCGGGAGGACGCAAATTCGAGTGGAGCTAGCACGCCTCGGGGAGATTCCTCGACTCATGGTGCATTTTCCCAGGTTGAAGAGAAGTTATCTGGCAAACTGGTCAGGGATTCTGGTGATGAGGTTAAAGGAAAACCTACCATCCAGAAGATCTTATCCTCAAAAGCAGAAGAGTGGATTGCTAAGAAAGGCTTATCGTGGCCGTGGAAAGGGACCGAGCAGGAAGGAGGATCTGAAACAAGGGCAGCCCGTTTTGTTTGGCCCTGGTTACAAAATGATCAAGAAGCTGAACCAGCTAATAATCATAAGAGTTCCTCTTCATCTGGGAAACCAGAAATGCAGCAAAACGACGGTCATCGAGCAGTCAATAACGAGGCCTCGGGATCCTGGTCGTCGTTCAATGTTAACAGCACCACTAGCAGTGCCAGTAGCTGTGGAAGTACCAGTAGTAGTGCTGTCAACAAGGTTGACACAGAAATAGACTGCTTGGATTATGAAATCTTGTGGGAAGACCTTACTATTGGGGAGCAAGTAGGGCAAGGTTCTTGTGGAACTGTCTATCATGCGCTGTGGTACGGATCAGATGTTGCCGTTAAAGTGTTTTCCAGACAAGAGTACTCAGATGATGTGCTTCTCTCCTTCAGGCAGGAGGTATCTCTGATGAAAAAGCTTAGGCACCCCAATATTCTACTCTTTATGGGAGTTGTGACTTCACCTCAGCGTCTCTGCATTATCACGGAATTCCTTCCACGTGGAAGTTTGTTTCGTTTACTACAGAGGAACACAGGCAAATTAGACTGGAGACGCCGTGTTCATATGGCTTTGGACATTGCCCGAGGCATGAACTATCTTCATCATTCCAGTCCACCTATTATTCACCGGGATTTAAAATCTTCGAACCTGTTAATTGATAAAAACTGGACTGTGAAGGTTGGGGATTTTGGTCTATCTCGACTTAAGCATGAGACTTATCTAACGACTAAGACCGGAAAGGGCACGCCTCAATGGATGGCGCCTGAAGTTCTTCGTAACGAGCCTTCAGATGAGAAGTCCGACTTGTACAGTTTTGGAGTCATATTGTGGGAGCTTGCGACGGAGAAGATCCCTTGGGAAAATCTCAATTCTATGCAGGTAATTGGCGCTGTTGGGTTCATGAATCAACGACTTGAAATCCCCAAAGACGTGGATCCACAATGGGCTTCTATTATTGAAAGCTGCTGGCAGAGCGAACCCGCAAACCGGCCATCATTCCAAGTTCTGATAGAAAGACTTAGAGAGATGCAGAGGAAGTTTGCTATTCAATTACAAGCAGCTCGTTCTGGTGGAGATAACAATAACAACAACAACAGCATCCCTCAAAAGGAAACATAA 2367 46.85 MGTPPAAELLRKIQELEEGQAHLKKEMSKLLHSGTAADSNSDHQIHHHHHHHQRSQSISPQRSRFATARRRGGAAAGGLDGATAAAWKRGSSSFRHSSPLQRESRTRDPLNDAAAGSGPAAVNFTNKQYLNILQSMGQSVHIFDLDYRIIYWNRAAEIVYGYSAAEALGQDAIELLVDPEDFAIANDVFCLVMAGENWTGHFPVKNKMGQKFIVVATNSPLYDDDALVGIICVSSDLRPFQELKTPFAAGSKQQDANSGIVPSRSTVSTKLGLDPQQPLQVAIASKLSNLASKVSNKVKSRIRTGENSSDREGGSGDSYHSDHGYPDAVLCDHREDANSSGASTPRGDSSTHGAFSQVEEKLSGKLVRDSGDEVKGKPTIQKILSSKAEEWIAKKGLSWPWKGTEQEGGSETRAARFVWPWLQNDQEAEPANNHKSSSSSGKPEMQQNDGHRAVNNEASGSWSSFNVNSTTSSASSCGSTSSSAVNKVDTEIDCLDYEILWEDLTIGEQVGQGSCGTVYHALWYGSDVAVKVFSRQEYSDDVLLSFRQEVSLMKKLRHPNILLFMGVVTSPQRLCIITEFLPRGSLFRLLQRNTGKLDWRRRVHMALDIARGMNYLHHSSPPIIHRDLKSSNLLIDKNWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDLYSFGVILWELATEKIPWENLNSMQVIGAVGFMNQRLEIPKDVDPQWASIIESCWQSEPANRPSFQVLIERLREMQRKFAIQLQAARSGGDNNNNNNSIPQKET 788
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 512662 518501 - Hsped.03g00440.1 Hepe03g0044 565042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0044 788 MobiDBLite consensus disorder prediction 426 460 - -
Hepe03g0044 788 SMART serkin_6 504 764 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0044 788 SUPERFAMILY Protein kinase-like (PK-like) 485 754 IPR011009 -
Hepe03g0044 788 MobiDBLite consensus disorder prediction 296 377 - -
Hepe03g0044 788 CDD STKc_MAP3K-like 510 756 - -
Hepe03g0044 788 PANTHER SERINE-THREONINE PROTEIN KINASE 57 759 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Hepe03g0044 788 MobiDBLite consensus disorder prediction 425 460 - -
Hepe03g0044 788 MobiDBLite consensus disorder prediction 362 376 - -
Hepe03g0044 788 CDD PAS 136 237 IPR000014 -
Hepe03g0044 788 MobiDBLite consensus disorder prediction 299 318 - -
Hepe03g0044 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g0044 788 Pfam PAS fold 128 236 IPR013767 GO:0006355(InterPro)
Hepe03g0044 788 MobiDBLite consensus disorder prediction 248 272 - -
Hepe03g0044 788 Gene3D Transferase(Phosphotransferase) domain 1 582 788 - -
Hepe03g0044 788 MobiDBLite consensus disorder prediction 31 117 - -
Hepe03g0044 788 MobiDBLite consensus disorder prediction 337 357 - -
Hepe03g0044 788 FunFam PAS domain-containing protein tyrosine kinase 497 581 - -
Hepe03g0044 788 MobiDBLite consensus disorder prediction 770 788 - -
Hepe03g0044 788 Gene3D PAS domain 137 239 - -
Hepe03g0044 788 FunFam PAS domain-containing protein tyrosine kinase family protein 582 773 - -
Hepe03g0044 788 Gene3D Phosphorylase Kinase; domain 1 497 581 - -
Hepe03g0044 788 NCBIfam PAS domain S-box protein 127 237 IPR000014 -
Hepe03g0044 788 Coils Coil 6 26 - -
Hepe03g0044 788 MobiDBLite consensus disorder prediction 768 788 - -
Hepe03g0044 788 ProSiteProfiles Protein kinase domain profile. 504 764 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0044 788 PRINTS Tyrosine kinase catalytic domain signature 617 635 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g0044 788 PRINTS Tyrosine kinase catalytic domain signature 578 591 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g0044 788 PRINTS Tyrosine kinase catalytic domain signature 664 674 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g0044 788 PRINTS Tyrosine kinase catalytic domain signature 683 705 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g0044 788 PRINTS Tyrosine kinase catalytic domain signature 727 749 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g0044 788 SMART pas_2 127 193 IPR000014 -
Hepe03g0044 788 Pfam Protein tyrosine and serine/threonine kinase 504 756 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g0044 788 SUPERFAMILY PYP-like sensor domain (PAS domain) 129 236 IPR035965 -
Hepe03g0044 788 ProSiteProfiles PAS repeat profile. 125 196 IPR000014 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0044 Hepe-Chr3:512662 Hepe07g2360 Hepe-Chr7:67958237 9.11e-99 dispersed
Hepe03g0044 Hepe-Chr3:512662 Hepe09g1569 Hepe-Chr9:42598454 2.16e-107 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72632 PF07714 PK_Tyr_Ser-Thr 7.00E-68 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0044 - - - 0.0