Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0048 ATGTGCCTTCAATCGAAGTTGACGCATCTGACGGTGACAAATTCTTTCATCTCTCCTTCTATCTCTTCATTCCAATGCTTTTTAATACGTTTTTCATTTTGTGTTCGATCGTTTATTCCGACTCATATTCCTCCAGTTATGGACGACGGGAATCAGACGCAGGAGAATAGCTACATCTACATTCCACCTAGGGTAAAGACACAACAGCAGGACAAGAGAGTCCAATGTTACGAGCCTGCAACTATGAAATACCTGGGCTTTTTTCCTGCATTGTCACGAGATGAGGTCAAGGAGCGTGTTGCTTCAGCCAGAAAAGCACAAAAAGAATGGGCCAAAAGTAGCTTCAAGCAAAGGCGTTTGCTTTTACGGATACTTTTGAAGTATATAATTGAGCATCAAGAGCTTATTTGCGAGATCTCCTCCCGCGACACTGGAAAAACAATAGTGGATGCTAGTATGGGAGAAGTAATGGCGACGTGTGAAAAGATTACTTGGCTTCTTTCAGAGGGTGAGAAATGGCTGAAGCCTGAGAGCCGATCATGTGGAAGGGCAACACTTCACAAGAAAGCCCGAGTAGAGTTTCATCCCCTTGGAGTTATTGGGGCAATAGTCCCATGGAACTATCCATTCCATAACCTTTTCAATCCAGTGCTTGCAGCAGTCTTTGCAGGAAACGGCATTGTAGTTAAGGTTTCAGAACATGCAAGTTGGTCCGGATGCTTCTACATCAGGATTATCCAAGCTGCACTTGCGGCTGTTGGAGCTCCCGAGAGTTTAGTCGATGTGATAACAGGGTTTGCTGAAACAGGTGAAGCGCTAGTATCTTCAGTAGACAAAATGATATTCGTTGGATCTACTGGTGTGGGTAGGATGATAATGAAAACTGCTGCTGAGACACTTATCCCAGTTACTCTTGAGTTGGGTGGAAAGGACGCATTTATTGTGTGTGAGGATGTTGATTTGGACCATGTTGTAAACGTTGCTCTCAGGGCTTCTATTACATCAAGTGGACATAATTGTACTGGAGCTGAGAGGTTTTATGTCCACAAGAACATTTATTCTTCGTTTGTGGAAAAAATATCAGAACGAGTAAAGGCTATTACAGTTGGTCCACCATTAGCTGGGAAATATGATATGGGTGCCATCTGTACGCAAGAGCAGTCTGAGAAACTTCAAAGCCTTGTAAATGATGCCTTAGACAGCGGGGCAAAAATTGTTGCTCGTGGAAGTTTTGGACATTTACCTGAAGGTGCCGTTGATCAATATTTCCCACCTACCGTTGTTGTTGATGTTAACCATACCATGAAGTTAATGCAAGAGGAGGCATTTGGACCAATCCTGCCTATAATGAAATTCAGCACAGATGATGAGGCCGTGAAGCTTGCAAATGATTCAAGATTCGGGCTTGGCTGTTCTGTGTTTTCTGGCAGTCAGCAGCGTGCCAAGAATATCGCTTCGCAGATACGTTCTGGATGTGTTGCAATTAACGACTTCGCCACAAATTATTTGTGTCAGTCCTTGCCATTTGGTGGCGTGAAAGAGAGTGGATTCGGTCGATTTGCGGGGATTGAAGGATTACGAGCATGTTGTCTCGTCAAAGCAGTCGTTGAGGATAGGTGGTGGCCGTACATTCAGACTAAGTATCCTAAGCCTCTTACGTATCCTGTTGCAGAGAACGCTTTTGAGTTTCAGACGTCACTCGTTGAAGCAACGTATGGCATGAACATATGGGATCGATTAAGAGCATTGGTCAATGTTCTGAAGATGCTCTCCGAGCAGAACACTCCGGCTAAAGATGACTCTATCATTGGCGATGGAAGTAAGAGAGCTAATTGA 1836 44.12 MCLQSKLTHLTVTNSFISPSISSFQCFLIRFSFCVRSFIPTHIPPVMDDGNQTQENSYIYIPPRVKTQQQDKRVQCYEPATMKYLGFFPALSRDEVKERVASARKAQKEWAKSSFKQRRLLLRILLKYIIEHQELICEISSRDTGKTIVDASMGEVMATCEKITWLLSEGEKWLKPESRSCGRATLHKKARVEFHPLGVIGAIVPWNYPFHNLFNPVLAAVFAGNGIVVKVSEHASWSGCFYIRIIQAALAAVGAPESLVDVITGFAETGEALVSSVDKMIFVGSTGVGRMIMKTAAETLIPVTLELGGKDAFIVCEDVDLDHVVNVALRASITSSGHNCTGAERFYVHKNIYSSFVEKISERVKAITVGPPLAGKYDMGAICTQEQSEKLQSLVNDALDSGAKIVARGSFGHLPEGAVDQYFPPTVVVDVNHTMKLMQEEAFGPILPIMKFSTDDEAVKLANDSRFGLGCSVFSGSQQRAKNIASQIRSGCVAINDFATNYLCQSLPFGGVKESGFGRFAGIEGLRACCLVKAVVEDRWWPYIQTKYPKPLTYPVAENAFEFQTSLVEATYGMNIWDRLRALVNVLKMLSEQNTPAKDDSIIGDGSKRAN 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 596891 604822 + Hsped.03g00480.1 Hepe03g0048 565046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0048 611 Pfam Aldehyde dehydrogenase family 69 535 IPR015590 GO:0016491(InterPro)
Hepe03g0048 611 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 305 312 IPR029510 GO:0016491(InterPro)
Hepe03g0048 611 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 73 533 IPR016162 GO:0016491(InterPro)
Hepe03g0048 611 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 313 508 IPR016163 GO:0016620(InterPro)
Hepe03g0048 611 CDD ALDH_F15-22 77 539 - -
Hepe03g0048 611 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 65 536 - -
Hepe03g0048 611 FunFam aldehyde dehydrogenase 22A1 73 325 - -
Hepe03g0048 611 SUPERFAMILY ALDH-like 42 537 IPR016161 GO:0016491(InterPro)
Hepe03g0048 611 FunFam Aldehyde dehydrogenase A 309 503 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0048 Hepe-Chr3:596891 Hepe09g0747 Hepe-Chr9:7167395 1.60e-65 dispersed
Hepe03g0048 Hepe-Chr3:596891 Hepe10g0002 Hepe-Chr10:70450 8.08e-62 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0048 - - - 0.0