Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0050 ATGGCGACTTCCGTTTTCTTCCTTCTTCTTTTTCACCTGCTCTCCGCCGTCACCACCGTCACCGCCGGCGGCGGCTCATCCTGGATTGTGAAACATCTGCCGGGATTTTCCGGTCCTCTTCCATTCGAACTCGAAACTGGATATGTGGGTGTGGGGAAAACAGAGGAAGTTCAGTTGTTTTATTACTTTGTGAAATCTCAAGGAAATCCCAAAACAGATCCTCTAATGACATGGTACACCGGAGGTCCCGGTTGCTCCGCTCTCTGTGGACTTTCCTTTGAAATTGGTCCTTTAAATTTTAAGGTAGAGCCATATAGTGGAAGGCTACCTCAACTAATCTTGAATCCCCATACATGGACCAAGAAAGCCAGTATATTATTTATTGATTCTCCCGTGGGCACTGGATTTTCATATAGTCGAACTCGACATGGTTCGATAAAAGGAGATTTTAGACAAGTCGAACAAAATCATCAATTTTTGAGAAAGTGGCTTGTGGATCATCCAGAATTTATATCTAATCCTTTTTATGTTGGTGGAGATTCATATACTGGTATTATTATTCCTCCTCTTACTCAAGCAATCGAAGAAGGAAATAAACATTCTTTCCCGGTTATAAACCTTCAGGGATACATAGAGGGAGATCCCGTCACTATCCGTGACTCGAATGAAAATTATAGGATTCCTTTTGCTCATAGCATGAGCCTCATCTCTGATGAATTGTATGAGTCATTGACAACTAGTTGCAATGGAGAATATCAACATGTTGATTCAAATAATGCGGAGTGCATAAATCATTTATCAACGTTCGAAAAGAATGTGAAGAAAATCAATTATTGGGCTATTTCTTGGCCTTCTTGTGAGGATGTTTCTTCGCCACCACAAGTTACATTTGGTCAGCGAAGATCTCTTTACAACACCAAAGTTTTACCTCCTTCTATGGACTGTCAAGAGTATAAATACTTTCTCGCTTATCATTGGGCTAACGACGATCAAGTTCGAAAAGCACTTCATATACACGAGGGAACTATTGGAGAATGGATAAGATGTCAGAGTCGGAAAGATTACAACTACGAGATTATGAATTCTGTTCCTTATCATGCGAACCTTAGTCTTAAAGGTTATCGATCTTTAGTTTTTAGTGGGGATCATGATATGATGGTGCCGATTATGGATACTCAAGCATGGATCAAATCTCTAAATTATTCCATCGTCGACGATTGGAGGCCTTGGTTTGACGCTGACCAAATAGTCGGATATACAAGAACTTATGCAAACAACATGACATTTGTAACAATAAAAGGTGGAGGGCACACACCAGAATACATGCAATACCCAAGTGGCATAATGTTTAATAGATGGATAGCAGGAGAATCCTTGTGA 1380 40.36 MATSVFFLLLFHLLSAVTTVTAGGGSSWIVKHLPGFSGPLPFELETGYVGVGKTEEVQLFYYFVKSQGNPKTDPLMTWYTGGPGCSALCGLSFEIGPLNFKVEPYSGRLPQLILNPHTWTKKASILFIDSPVGTGFSYSRTRHGSIKGDFRQVEQNHQFLRKWLVDHPEFISNPFYVGGDSYTGIIIPPLTQAIEEGNKHSFPVINLQGYIEGDPVTIRDSNENYRIPFAHSMSLISDELYESLTTSCNGEYQHVDSNNAECINHLSTFEKNVKKINYWAISWPSCEDVSSPPQVTFGQRRSLYNTKVLPPSMDCQEYKYFLAYHWANDDQVRKALHIHEGTIGEWIRCQSRKDYNYEIMNSVPYHANLSLKGYRSLVFSGDHDMMVPIMDTQAWIKSLNYSIVDDWRPWFDADQIVGYTRTYANNMTFVTIKGGGHTPEYMQYPSGIMFNRWIAGESL 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 630147 635223 + Hsped.03g00500.1 Hepe03g0050 565048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0050 459 Pfam Serine carboxypeptidase 34 456 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Hepe03g0050 459 FunFam Carboxypeptidase 314 458 - -
Hepe03g0050 459 FunFam Serine carboxypeptidase-like 11 24 459 - -
Hepe03g0050 459 Gene3D - 313 459 - -
Hepe03g0050 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Hepe03g0050 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Hepe03g0050 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Hepe03g0050 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Hepe03g0050 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 453 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
Hepe03g0050 459 SUPERFAMILY alpha/beta-Hydrolases 30 457 IPR029058 -
Hepe03g0050 459 Gene3D alpha/beta hydrolase 26 296 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1839 Hepe-Chr1:83290666 Hepe03g0050 Hepe-Chr3:630147 4.76e-58 dispersed
Hepe01g1841 Hepe-Chr1:83318481 Hepe03g0050 Hepe-Chr3:630147 9.26e-274 dispersed
Hepe03g0050 Hepe-Chr3:630147 Hepe03g2090 Hepe-Chr3:78819250 5.09e-104 dispersed
Hepe03g0050 Hepe-Chr3:630147 Hepe09g1272 Hepe-Chr9:17306298 1.53e-107 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0050 K16296 - csv:101210918 571.622