Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0078 ATGGGATCGGAGCAGTTGATGGCCGGTGGCGGGCCTCGATACGTTCAAATGCAACCGGAGCCGACTACGGCCACGGCTACGATGTCCTCGTTTTTCTCTTTCCATCCGGACGCTCCTGAACCGACCAGGATTTTCGATGAGTTACCCAAGGCCATTATCATTTCCGTCTCTCGCCCTGATGCCGGCGATATTAGTCCCATGCTTCTTTCTTACACAATCGAGTGCCAGTACAAGCAGTTTAAATGGCGCATGTTGAAGAAAGCTTCCCATGTATTCTTTTTGCATTTTGCATTAAAGAAACGGGCGTTCATTGAGGAAATTAACGAGAAGCAAGAACAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGAACACACAACAGTGCCCCAAGATGAGGATGGACCAGAGGATGAGGCAGATCCTCTGCATCATGATGAAATTTCTAAAAATAGGGATGTTCCATCCAGTGCTGCCCTGCCTATTATTCGGCCTGCCTTAGGAAGGCAGCAGTCTACTATGTCTGATAGAGCTAAGACTGCAATGCAAGGGTATCTGAATCACTTCTTGAGTAACATGGACATTGTCAACTCTCGAGAGGTTTGCAGGTTTTTGGAGGTCTCTAAGTTATCATTTTCACCAGAATACGGCCCAAAGTTGAAAGAGGATTATGTCATGGTGAAGCATCTACCTAAAATTGCAAGGGAAGAAGACTCTAAGAAATGTTGTCTATGCGTATGGTTTCATTGTTGTAATGACAATTGGCAAAAGGTGTGGGCTGTGTTAAAACCTGGATTTTTGGCCTTGTTGGGAGATCCTTTTGATTCTCAACCAATGGATATTATAGTTTTTGATGTGCTACCTACTTCTGATGCCAATGGAGATGGACGAGTATCTTTAGCTAAGGAAATTAATGAGCGGAATCCATTACGACATTCATTTAAGGTGACATGTGGAAATAGGAATATTAGGATAAGAGCAAAGAATGGATCCAAGGTTAAAGATTGGGTTGCTGCAATTAATGATGCTGGACTGAGGCCTCCTGAGGGCTGGTGTCATCCTCACCGTTTTGGTTCTTTTGCTCCTCCAAGGGGTTTGACTGACGATGGTAGTAAGGCTCAGTGGTTCATCGATGGCCTTGCAGCTTTTGAAGCTATTGCCTTTTCCATTGAACATGCAAAGTCTGAGATTTTTATTTGTGGCTGGTGGCTTTGCCCAGAACTGTATCTGCGTCGTCCTTTTATTTCGAATGCTTCATCCAGGCTTGATGATTTACTTGAAGCAAAAGCTAAGCAAGGGGTTCAGATATACATTCTTCTCTACAAAGAGGTTGCCCTTGCCTTAAAAATTAACAGTGTTTATAGCAAGAGAAAACTTCTCGGCATCCATGAGAATGTCAGAGTATTACGCTACCCCGACCACTTCTCCAGTGGCGTGTACTTATGGTCCCACCATGAAAAACTTGTCATTGTTGATTATCATATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGATACACCAGAACATAAAGTTGGCGATTGTCCTCCTTCAGTATGGCCTGGGAAGGACTACTATAATCCAAGGGAATCCGAGCCAAATTCATGGGAAGATACCATGAAAGATGAGTTGGATCGCAAGAAATATCCTCGCATGCCTTGGCATGATGTCCACTGTGCACTTTGGGGACCACCTTGCCGAGACATAGCCAGGCATTTTGTCCAACGCTGGAATTATGCTAAGAGAAATAAAGCCCCAAATGAGCAGGCAATTCCATTACTTATGCCTCAGCATCATATGGTCATTCCTCATTACTTGTGGAATAGCCGAGAGTTGGAGGTTGAAAAGAAGAGTTTTGATGAAAAATCTAGAGGATCAACGGTGCCGGATACATTTTCTCGAGGATCATCCTTTCATGATATTCCATTGCTTTTGCCTCAAGAGGCTGATGGACCGAAAGATCAAAATGAAGGTCCAAAAGTAAATGGACTGGAGCCCAATGCTAATCCCCTTGATCAGCAAAGTAAGATCAGCAGCAGTCTCTCTTTCTCTTTCAGGAAGATCAAAGTTGAACCCATAGGTTCAGATATGCCTCTGAAAGGCTTTGTTGATGATCTTGACCATTTGGATTCCCATGGAAAGTTGTCTGGAGATGGGAAAACGCATCATCGTGTCACAAGTTCAGATATGGAGTGGTGGGAAACACAAGATAGGGGACATCATGGTGGCTTCACGGATGAATCCGGACAAGTTGGTCCATGTGCTTCATGTCGTTGTCAGGTCATCAGAAGTGTTAGTCAGTGGTCTGCTGGGACAAGCCGAACTGAAGAGAGCATTCACATTGCATATTGCAATCTTATTGAGAAAGCAGAACATTTTATCTACATTGAGAATCAATTTTTTATATCAGGCCTCGCAGGAGATGATTCAATACGGAATCGTGTGTTAGAAGCATTATACCGCCGCATAATGAGAGCCTACCGTGAAAAGAAGATTTTTAGGGTTATTATTGTCATACCACTCTTACCTGGATTTCAGGGGGGTCTGGATGACAGTGGTGCAGCATCGGTTAGAGCTATAATGCACTGGCAGTATCGAACTATATGTCGAGGACGGCATTCAATATTGCATAATCTTTTTGACCTTCTTGGTTCAAAAGTTCAGGATTATATATCATTTTATGGCCTCAGATCTTATGGTAAACTCTTTGATGGTGGTCCTGTGGCTACAAGCCAGGTGTACGTGCATAGTAAAATTATGATTATCGATGATTGTATTGCTTTGATTGGATCGGCTAACATCAACGACAGGAGTTTACTTGGTTCTAGGGATTCTGAGATTGCTATTGTTATTGAAGATAACGAACTTATCAATTCATATATGGGAGGACAACCATGGAAAGCGGGAAAGTTTTGTTGGAGTCTCCGTCTCTCTCTTTGGTCTGAACATCTTGGTCTTCGTCCCGGGCAGGTCAATCTAATAGTTGACCCAGTTGCTGATTCAACCTACAAGGATACGTGGATGGCAACTGCTAAGACAAACACAACAATATACCAAGATGTTTTTTCTTGCTTACCAAACGACCTCATAAATTCCAGAGCTGGACTGAGACAAAGCGCCTCGATCTGGAAAGATAGACTGAAGCAGACCACAATAGATTTAGGAATTGCCCCTGAGAAGCTTGAGTTTTATAAGAATGGAGAAATTGAAAAGATTGATCCAATGGAGAGATTAAGTTCAGTGAAGGGACATCTTGTTTCCTTCCCATTGGAATTCCTCAGCAAAGAAGATTTAAGACCTGTGTTCAATGAGAGTGAGTATTATGCATCTCAAGTTTTTCATTAA 3354 42.75 MGSEQLMAGGGPRYVQMQPEPTTATATMSSFFSFHPDAPEPTRIFDELPKAIIISVSRPDAGDISPMLLSYTIECQYKQFKWRMLKKASHVFFLHFALKKRAFIEEINEKQEQVKEWLQNLGIGEHTTVPQDEDGPEDEADPLHHDEISKNRDVPSSAALPIIRPALGRQQSTMSDRAKTAMQGYLNHFLSNMDIVNSREVCRFLEVSKLSFSPEYGPKLKEDYVMVKHLPKIAREEDSKKCCLCVWFHCCNDNWQKVWAVLKPGFLALLGDPFDSQPMDIIVFDVLPTSDANGDGRVSLAKEINERNPLRHSFKVTCGNRNIRIRAKNGSKVKDWVAAINDAGLRPPEGWCHPHRFGSFAPPRGLTDDGSKAQWFIDGLAAFEAIAFSIEHAKSEIFICGWWLCPELYLRRPFISNASSRLDDLLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLGIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDYHICFIGGLDLCFGRYDTPEHKVGDCPPSVWPGKDYYNPRESEPNSWEDTMKDELDRKKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYLWNSRELEVEKKSFDEKSRGSTVPDTFSRGSSFHDIPLLLPQEADGPKDQNEGPKVNGLEPNANPLDQQSKISSSLSFSFRKIKVEPIGSDMPLKGFVDDLDHLDSHGKLSGDGKTHHRVTSSDMEWWETQDRGHHGGFTDESGQVGPCASCRCQVIRSVSQWSAGTSRTEESIHIAYCNLIEKAEHFIYIENQFFISGLAGDDSIRNRVLEALYRRIMRAYREKKIFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGRHSILHNLFDLLGSKVQDYISFYGLRSYGKLFDGGPVATSQVYVHSKIMIIDDCIALIGSANINDRSLLGSRDSEIAIVIEDNELINSYMGGQPWKAGKFCWSLRLSLWSEHLGLRPGQVNLIVDPVADSTYKDTWMATAKTNTTIYQDVFSCLPNDLINSRAGLRQSASIWKDRLKQTTIDLGIAPEKLEFYKNGEIEKIDPMERLSSVKGHLVSFPLEFLSKEDLRPVFNESEYYASQVFH 1117
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 922707 934834 - Hsped.03g00780.1 Hepe03g0078 565076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0078 1117 CDD PLDc_vPLD1_2_yPLD_like_2 774 958 - -
Hepe03g0078 1117 PANTHER PHOSPHOLIPASE D 174 1098 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Hepe03g0078 1117 SUPERFAMILY Phospholipase D/nuclease 754 963 - -
Hepe03g0078 1117 CDD PLDc_vPLD1_2_yPLD_like_1 373 518 - -
Hepe03g0078 1117 Gene3D - 239 343 IPR011993 -
Hepe03g0078 1117 Pfam Phospholipase D Active site motif 480 507 IPR001736 GO:0003824(InterPro)
Hepe03g0078 1117 MobiDBLite consensus disorder prediction 126 150 - -
Hepe03g0078 1117 Coils Coil 100 120 - -
Hepe03g0078 1117 PIRSF PLD_euk 675 1117 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Hepe03g0078 1117 PIRSF PLD_euk 55 629 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Hepe03g0078 1117 SUPERFAMILY Phospholipase D/nuclease 325 599 - -
Hepe03g0078 1117 Gene3D Endonuclease Chain A 743 971 - -
Hepe03g0078 1117 MobiDBLite consensus disorder prediction 648 679 - -
Hepe03g0078 1117 SMART pld_4 480 507 IPR001736 GO:0003824(InterPro)
Hepe03g0078 1117 SMART pld_4 914 941 IPR001736 GO:0003824(InterPro)
Hepe03g0078 1117 Pfam PLD-like domain 916 963 IPR025202 -
Hepe03g0078 1117 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 914 941 IPR001736 GO:0003824(InterPro)
Hepe03g0078 1117 SUPERFAMILY PH domain-like 252 343 - -
Hepe03g0078 1117 Gene3D Endonuclease Chain A 368 605 - -
Hepe03g0078 1117 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 480 507 IPR001736 GO:0003824(InterPro)
Hepe03g0078 1117 FunFam Phospholipase 748 968 - -
Hepe03g0078 1117 CDD PH_PLD 196 343 - -
Hepe03g0078 1117 SMART PH_update 219 347 IPR001849 -
Hepe03g0078 1117 ProSiteProfiles PH domain profile. 254 345 IPR001849 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0078 Hepe-Chr3:922707 Hepe04g1636 Hepe-Chr4:71716067 8.88e-44 dispersed
Hepe03g0078 Hepe-Chr3:922707 Hepe08g2288 Hepe-Chr8:62635055 0.0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0078 K01115 - csv:101211856 2102.41