Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe03g0083 | ATGGTCGTCGCCGTTGCTGTCGGTGTCAACAGCTCACCCAACGAAGCGCACGGCGACAGTACTACCAGTGATACTCACGGTGACAGTCACGGTGAGGAAGCCGGGGAAATTTCATCAACGACAAAAGCCGTTAAAGCCATTTGTCAACCAACCGATTACAAAGAAACCTGCGAGAAGAGCTTAATGACGGAAGCTGGTAACACAACAGACCCTAGAGAGCTAGTAAAAATTGGCTTCAGAGTTGCCAAGAAACATCTAAATGCGGCGATTAGAAATTCCACCACACTTAAAGAACTTGCCAAAGATCCAAGAACCAACCAAGCCCTTCAGAACTGCCGCGAGCTTATAGAATACGCCATCGACGATCTAACCGAATCGTTCGACCGAATTGGCACCTTTGAAATAACGAAACTCGATGAGTTCGTCAACGATTTAAAGATCTGGCTGAGTGGGGCCCTCACGTACGAACAAACTTGTTTGGACGGATTCGAAAACACCACCGGTGATGCCGGTGTTAGAATGCAGAAGTTTTTAAAGTCGTCTCAAGAAATGACGAGTAACGGTCTTGCGATTGTTTCTGAATTGTCGTCCATGTTGGGGCTACTTAACATTCCAGGACTGTCTTCACGTCGACTGTTGGAGGACGACGGAGATTTGCCGTCGTGGGTGAGCGAAGGAAATAGAGAGCTGATGCAGGCGGGGACAACGCAGATTAAGCCGAATGTGGTGGTGGCTCAAGATGGAAGTGGGAAGTACAAGACTATAAATGAAGCGTTGGTTAATGCACCGAAGAAAAGTAATATAACATTTGTGATTTATGTGAAGGCTGGAATTTATAAGGAAATTGTCCTTATTCCAAAGGCTTTGACTCATATTACCATGTACGGTGACGGCCCCACCAAAACTGTCGTTACCGGTAATTTAAACTTTATCGATGGTATCCAAACTTTCAAGACCTCCACCTTTTCGGTGGTCGGATCCAATTTCTTCTGTCGGGACATGGGGTTCGTGAACAGCGCCGGAGCAGCAAAGCATCAAGCTGTAGCACTTCGAGTTCAATCTGACCGATCCGTCTTCTACAATTGTCAAATGGACGGATATCAAGACACTCTCTACGTCCAAGCCCATCGTCAATTCTATCGCGATTGCTCAATCAGTGGCACCATTGACTTCGTCTTTGGTAACTCCGCTGCCATCTTCCAGAACTGCAAACTAATCGTCCGAAAGCCACTCGAAAACCAACAATGCATCGTCACGGCTCAAGGCCGGATGGACCGCCGCGAACCGACGGCCCTAATCTTCCAAAACTGCCACTTCATGGGCGACCCGAGTTACTTGCCCTTCAAGGCAGTGAACAAAGCCTATTTGGGTCGGCCATGGAAGCAATATTCACGAACCATCATAATGGGTTCTGAAATCGACGATTTAATCCAGCCGGAAGGATGGTTGCCGTGGATGGGGACTTTTGGACTAAACACATTGTTCTACGCCGAGTTTCAGAACAGAGGTCCAGGCGCGGATTTGAGCAAGAGGGTGAAGTGGCGAGGAATTAAAACGATTACGCCTCAGCATGCCGCGGATTTCACTCCGAGGAGGTTTATTGAGGGCGATTCTTGGATTAAACCCAAGGGAATTCCATATGCTTCTGCAATGATGTAA | 1659 | 47.68 | MVVAVAVGVNSSPNEAHGDSTTSDTHGDSHGEEAGEISSTTKAVKAICQPTDYKETCEKSLMTEAGNTTDPRELVKIGFRVAKKHLNAAIRNSTTLKELAKDPRTNQALQNCRELIEYAIDDLTESFDRIGTFEITKLDEFVNDLKIWLSGALTYEQTCLDGFENTTGDAGVRMQKFLKSSQEMTSNGLAIVSELSSMLGLLNIPGLSSRRLLEDDGDLPSWVSEGNRELMQAGTTQIKPNVVVAQDGSGKYKTINEALVNAPKKSNITFVIYVKAGIYKEIVLIPKALTHITMYGDGPTKTVVTGNLNFIDGIQTFKTSTFSVVGSNFFCRDMGFVNSAGAAKHQAVALRVQSDRSVFYNCQMDGYQDTLYVQAHRQFYRDCSISGTIDFVFGNSAAIFQNCKLIVRKPLENQQCIVTAQGRMDRREPTALIFQNCHFMGDPSYLPFKAVNKAYLGRPWKQYSRTIIMGSEIDDLIQPEGWLPWMGTFGLNTLFYAEFQNRGPGADLSKRVKWRGIKTITPQHAADFTPRRFIEGDSWIKPKGIPYASAMM | 552 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 987414 | 989157 | + | Hsped.03g00830.1 | Hepe03g0083 | 565081 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe03g0083 | 552 | FunFam | Pectinesterase | 235 | 551 | - | - | |
Hepe03g0083 | 552 | SMART | PMEI_2 | 39 | 191 | IPR006501 | GO:0004857(InterPro) | |
Hepe03g0083 | 552 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Hepe03g0083 | 552 | Gene3D | - | 235 | 551 | IPR012334 | - | |
Hepe03g0083 | 552 | Pfam | Plant invertase/pectin methylesterase inhibitor | 43 | 191 | IPR006501 | GO:0004857(InterPro) | |
Hepe03g0083 | 552 | CDD | PMEI-like_3 | 46 | 197 | - | - | |
Hepe03g0083 | 552 | PANTHER | PECTINESTERASE | 5 | 542 | - | GO:0030599(PANTHER)|GO:0046910(PANTHER) | |
Hepe03g0083 | 552 | Pfam | Pectinesterase | 241 | 537 | IPR000070 | GO:0030599(InterPro)|GO:0042545(InterPro) | |
Hepe03g0083 | 552 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 42 | 196 | IPR035513 | - | |
Hepe03g0083 | 552 | SUPERFAMILY | Pectin lyase-like | 236 | 548 | IPR011050 | - | |
Hepe03g0083 | 552 | ProSitePatterns | Pectinesterase signature 2. | 385 | 394 | IPR033131 | - | |
Hepe03g0083 | 552 | MobiDBLite | consensus disorder prediction | 21 | 35 | - | - | |
Hepe03g0083 | 552 | ProSitePatterns | Pectinesterase signature 1. | 266 | 285 | IPR018040 | - | |
Hepe03g0083 | 552 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 38 | 196 | IPR035513 | - | |
Hepe03g0083 | 552 | NCBIfam | pectinesterase inhibitor domain | 40 | 195 | IPR006501 | GO:0004857(InterPro) | |
Hepe03g0083 | 552 | FunFam | Pectinesterase | 40 | 196 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g0083 | Hepe-Chr3:987414 | Hepe03g0087 | Hepe-Chr3:1029541 | 0.0 | dispersed | |
Hepe03g0083 | Hepe-Chr3:987414 | Hepe03g0084 | Hepe-Chr3:992779 | 0.0 | tandem | |
Hepe03g0083 | Hepe-Chr3:987414 | Hepe03g1874 | Hepe-Chr3:75735245 | 2.26e-106 | wgd | |
Hepe03g0083 | Hepe-Chr3:987414 | Hepe05g1418 | Hepe-Chr5:63126448 | 1.76e-249 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe03g0083 | K01051 | - | csv:101221958 | 899.427 |