Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0130 ATGATCGTCGAATCAGGCTCGGCCATAGTGAATTTTGGGATGGAGTTAGTCGCGAATCATACTTCGGTGGCTTCTTTAAACTTATTCGTAGCTCTTCTTTGCGGTTGCATTGTTATCGGCCATTTATTGGAGGAAAATCGATGGATCAACGAGTCCATTACAGCCCTTGTCATTGGATTGTGTACCGGCATCATAATATTGTTAACAACTAGAGGGAAAAGCTCGCATTTATTTTTGTTCAATGAAGAGCTTTTCTTTATTTATCTCCTTCCGCCTATCATTTTCAATGCTGGGTTCCAGGTCAAGAAGAAGCAGTTTTTCCGCAACATCATGACCATAGTGCTTTTTGGTGCTTTTGGCACTCTCATATCCTTCTGTATTATATCATTAGGCGCTTTGCACTTCTTCAAAAAAATGAATATTGGTTCCCTTGATCTTGGAGATTATCTAGCTATTGGAGCCATTTTTTCTGCAACAGACTCTGTTTGCACCTTACAGGTTCTTAATCAGGATGAGACCCCTCTTCTCTATAGCCTGGTTTTTGGGGAGGGTGTTGTAAATGATGCCACATCGGTTGTGCTATTCAATGCAATCCAGAACTTTGATCTTTCTCACATGAATTCAAGCATCGTTCTGCAATTCATTGGGAACTTTTTGTATCTGTTCATTGCAAGTACTGTGCTGGGAGTTTTAGTTGGCCTCCTTAGTGCATACATAATTAAGAAGCTCTACTTTGGCAGGCATTCTACTGATCGCGAAGTTGCTCTTATGATACTCATGGCGTATTTCTCTTATATGCTAGCTGAACTCTTCTATTTAAGTGCAATTCTCACTGTATTCTTTTGCGGTATTGTTATGTCTCACTATACATGGCATAACGTAACTGAAAGTTCAAGAGTCACTACAAAGCATGCTTTTGCCACTCTTTCTTTTGTTGCTGAGATCTTTATCTTTCTTTACGTTGGCATGGATGCTCTTGATATTGAGAAGTGGAGATTTGTTAGCCACAGTCCTGGGAAATCAATTGGGGTGAGCTCAATACTGTTGGGATTGGTTCTGGTTGGAAGAGCAGCATTCGTTTTTCCTTTATCCTTCTTGTCCAATCTGACCAAGAAGTCCTCGCATGAAAAACTCAACTTCGAACAACAAGTCACTATTTGGTGGGCTGGTCTCATGCGTGGTGCTGTTTCAATGGCACTTGCATATAATCAGTTCACCAGGTCAGGCCACACTCATTTACCAGGCAATGCAATCATGATCACCAGTACAATCACAGTTGTTCTTTTCAGTACAGTGGTATTTGGAACGATGACAAAACCCCTGATAGGGATTTTGCTACCCCAACCAAAATACACAATGAGCATGCTCTCTTCAGAACCCTCTTCTCCAAAATCATTGACATTCCCACTCCTAAGCAATACTGAACAAAACAGCCCTTACCCTTTAGGGCTGTTTCTGAGAATCCCAGCCCACACAGTTCACCATTATTGGCGAAGATTCGACGACGCCTTCATGCGCCCTGTGTTTGGAGGACGGGGCTTCGTGCCCTTCGTCCCAGGGTCCCCTATCGAAGACCCCATGTCCCAACAATGGCAAACTGAGGGAGTACTCGAAGCCATTGATGATGATGATAAAATCATTCTTATACAGACTCGATAA 1659 42.31 MIVESGSAIVNFGMELVANHTSVASLNLFVALLCGCIVIGHLLEENRWINESITALVIGLCTGIIILLTTRGKSSHLFLFNEELFFIYLLPPIIFNAGFQVKKKQFFRNIMTIVLFGAFGTLISFCIISLGALHFFKKMNIGSLDLGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQNFDLSHMNSSIVLQFIGNFLYLFIASTVLGVLVGLLSAYIIKKLYFGRHSTDREVALMILMAYFSYMLAELFYLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVSHSPGKSIGVSSILLGLVLVGRAAFVFPLSFLSNLTKKSSHEKLNFEQQVTIWWAGLMRGAVSMALAYNQFTRSGHTHLPGNAIMITSTITVVLFSTVVFGTMTKPLIGILLPQPKYTMSMLSSEPSSPKSLTFPLLSNTEQNSPYPLGLFLRIPAHTVHHYWRRFDDAFMRPVFGGRGFVPFVPGSPIEDPMSQQWQTEGVLEAIDDDDKIILIQTR 552
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 1569976 1577505 + Hsped.03g01300.1 Hepe03g0130 565128
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0130 552 Gene3D - 146 197 - -
Hepe03g0130 552 Pfam Sodium/hydrogen exchanger family 30 441 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Hepe03g0130 552 PANTHER SODIUM/HYDROGEN EXCHANGER 21 540 IPR018422 GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro)
Hepe03g0130 552 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe03g0130 552 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe03g0130 552 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe03g0130 552 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0130 Hepe-Chr3:1569976 Hepe09g1607 Hepe-Chr9:46355457 8.22e-269 dispersed
Hepe01g1235 Hepe-Chr1:77591897 Hepe03g0130 Hepe-Chr3:1569976 7.25e-207 transposed
Hepe07g1429 Hepe-Chr7:47446966 Hepe03g0130 Hepe-Chr3:1569976 3.34e-49 transposed
Hepe03g0130 Hepe-Chr3:1569976 Hepe03g1940 Hepe-Chr3:76547620 2.17e-249 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0130 - - - 0.0