Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe03g0130 | ATGATCGTCGAATCAGGCTCGGCCATAGTGAATTTTGGGATGGAGTTAGTCGCGAATCATACTTCGGTGGCTTCTTTAAACTTATTCGTAGCTCTTCTTTGCGGTTGCATTGTTATCGGCCATTTATTGGAGGAAAATCGATGGATCAACGAGTCCATTACAGCCCTTGTCATTGGATTGTGTACCGGCATCATAATATTGTTAACAACTAGAGGGAAAAGCTCGCATTTATTTTTGTTCAATGAAGAGCTTTTCTTTATTTATCTCCTTCCGCCTATCATTTTCAATGCTGGGTTCCAGGTCAAGAAGAAGCAGTTTTTCCGCAACATCATGACCATAGTGCTTTTTGGTGCTTTTGGCACTCTCATATCCTTCTGTATTATATCATTAGGCGCTTTGCACTTCTTCAAAAAAATGAATATTGGTTCCCTTGATCTTGGAGATTATCTAGCTATTGGAGCCATTTTTTCTGCAACAGACTCTGTTTGCACCTTACAGGTTCTTAATCAGGATGAGACCCCTCTTCTCTATAGCCTGGTTTTTGGGGAGGGTGTTGTAAATGATGCCACATCGGTTGTGCTATTCAATGCAATCCAGAACTTTGATCTTTCTCACATGAATTCAAGCATCGTTCTGCAATTCATTGGGAACTTTTTGTATCTGTTCATTGCAAGTACTGTGCTGGGAGTTTTAGTTGGCCTCCTTAGTGCATACATAATTAAGAAGCTCTACTTTGGCAGGCATTCTACTGATCGCGAAGTTGCTCTTATGATACTCATGGCGTATTTCTCTTATATGCTAGCTGAACTCTTCTATTTAAGTGCAATTCTCACTGTATTCTTTTGCGGTATTGTTATGTCTCACTATACATGGCATAACGTAACTGAAAGTTCAAGAGTCACTACAAAGCATGCTTTTGCCACTCTTTCTTTTGTTGCTGAGATCTTTATCTTTCTTTACGTTGGCATGGATGCTCTTGATATTGAGAAGTGGAGATTTGTTAGCCACAGTCCTGGGAAATCAATTGGGGTGAGCTCAATACTGTTGGGATTGGTTCTGGTTGGAAGAGCAGCATTCGTTTTTCCTTTATCCTTCTTGTCCAATCTGACCAAGAAGTCCTCGCATGAAAAACTCAACTTCGAACAACAAGTCACTATTTGGTGGGCTGGTCTCATGCGTGGTGCTGTTTCAATGGCACTTGCATATAATCAGTTCACCAGGTCAGGCCACACTCATTTACCAGGCAATGCAATCATGATCACCAGTACAATCACAGTTGTTCTTTTCAGTACAGTGGTATTTGGAACGATGACAAAACCCCTGATAGGGATTTTGCTACCCCAACCAAAATACACAATGAGCATGCTCTCTTCAGAACCCTCTTCTCCAAAATCATTGACATTCCCACTCCTAAGCAATACTGAACAAAACAGCCCTTACCCTTTAGGGCTGTTTCTGAGAATCCCAGCCCACACAGTTCACCATTATTGGCGAAGATTCGACGACGCCTTCATGCGCCCTGTGTTTGGAGGACGGGGCTTCGTGCCCTTCGTCCCAGGGTCCCCTATCGAAGACCCCATGTCCCAACAATGGCAAACTGAGGGAGTACTCGAAGCCATTGATGATGATGATAAAATCATTCTTATACAGACTCGATAA | 1659 | 42.31 | MIVESGSAIVNFGMELVANHTSVASLNLFVALLCGCIVIGHLLEENRWINESITALVIGLCTGIIILLTTRGKSSHLFLFNEELFFIYLLPPIIFNAGFQVKKKQFFRNIMTIVLFGAFGTLISFCIISLGALHFFKKMNIGSLDLGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQNFDLSHMNSSIVLQFIGNFLYLFIASTVLGVLVGLLSAYIIKKLYFGRHSTDREVALMILMAYFSYMLAELFYLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVSHSPGKSIGVSSILLGLVLVGRAAFVFPLSFLSNLTKKSSHEKLNFEQQVTIWWAGLMRGAVSMALAYNQFTRSGHTHLPGNAIMITSTITVVLFSTVVFGTMTKPLIGILLPQPKYTMSMLSSEPSSPKSLTFPLLSNTEQNSPYPLGLFLRIPAHTVHHYWRRFDDAFMRPVFGGRGFVPFVPGSPIEDPMSQQWQTEGVLEAIDDDDKIILIQTR | 552 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 1569976 | 1577505 | + | Hsped.03g01300.1 | Hepe03g0130 | 565128 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe03g0130 | 552 | Gene3D | - | 146 | 197 | - | - | |
| Hepe03g0130 | 552 | Pfam | Sodium/hydrogen exchanger family | 30 | 441 | IPR006153 | GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro) | |
| Hepe03g0130 | 552 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 21 | 540 | IPR018422 | GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro) | |
| Hepe03g0130 | 552 | PRINTS | Na+/H+ exchanger signature | 113 | 121 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe03g0130 | 552 | PRINTS | Na+/H+ exchanger signature | 153 | 163 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe03g0130 | 552 | PRINTS | Na+/H+ exchanger signature | 84 | 95 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe03g0130 | 552 | PRINTS | Na+/H+ exchanger signature | 98 | 112 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe03g0130 | Hepe-Chr3:1569976 | Hepe09g1607 | Hepe-Chr9:46355457 | 8.22e-269 | dispersed | |
| Hepe01g1235 | Hepe-Chr1:77591897 | Hepe03g0130 | Hepe-Chr3:1569976 | 7.25e-207 | transposed | |
| Hepe07g1429 | Hepe-Chr7:47446966 | Hepe03g0130 | Hepe-Chr3:1569976 | 3.34e-49 | transposed | |
| Hepe03g0130 | Hepe-Chr3:1569976 | Hepe03g1940 | Hepe-Chr3:76547620 | 2.17e-249 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe03g0130 | - | - | - | 0.0 |