Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0147 ATGGGTTGTATCCATACGAAATGTTGCTGTCGCTACCCTAAATCGTTGGTTGGAGAATCCCAAGACTTTCAGCAAGGGGTTGCTTACTGTCTACAAGATAAGAACACTGTGATAGAGAAATCATTGGAGTTTATTCCTGTTGCTTCCCACAACCACAACTTTCATTTGGAATATTTGGTTCTGGCTCAGCGTGGTTACTACCCTGAATCCCCTGATAAGGAAAATCAAGACAGTTTCTGCATTAGAACAAGTATTCAAGGTAACCCAAATGCTCATTTCTTTGGTGTTTTTGATGGGCATGGTCAATTTGGAATGCAGTGTTCTAATTTTGTGAAGGATAGGTTAATAGAAAAGCTATGTAATGATCCCACATTGTTAGATGATCCTGTACAAGCTTATAATTCAGCTTTTTTATCCACAAATGATGAGCTGCATACAAGTGAGATTGATGATTCCATGAGTGGAACAACTGCAATTACTGTCCTTGTTGTTGGGGATACCCTTTATGTAGCTAATGTGGGGGATTCAAGAGCTGTAATTGCAGTTAAAGAAGGGAATTGTGTCCTTGCTAAGGACTTGTCAAATGATCAAACACCATTTAGAAAGGATGAGTATGAGAGAGTTAAGCTTTGTGGAGCCAGAGTTCTGAGTGTTGATCAAGTGGAAGGGCTTGTGGATCCTGATATTCAGTGCTGGGGTGATGAAGAAAGTCAGGGTGGCGATCCGCCTCGACTGTGGGTTCAAAATGGGTTGTATCCTGGGACTGCATTTACCAGGAGCATAGGTGATAGTACTGCAGAGAAGATCGGTGTAAATGCCGTTCCCGAGGTTTTAGTTTGTCAGCTTAACCCCAATCATCTTTTCTTTGTGGTTGCTAGTGATGGAGTTTTCGAGTTCCTTTCAAGTCAAACTGTTGTTGATATGGCATCAAGTTATGCAGATCCTCAAGATGCATGTACTGCCATTGCTGCCGAGTCGTATAAACTATGGATGGAACATGAAAATCGAACCGATGATATTACGATCATTATTGTTCATATCAAAGGCTTGTCTAATGTATGA 1062 41.05 MGCIHTKCCCRYPKSLVGESQDFQQGVAYCLQDKNTVIEKSLEFIPVASHNHNFHLEYLVLAQRGYYPESPDKENQDSFCIRTSIQGNPNAHFFGVFDGHGQFGMQCSNFVKDRLIEKLCNDPTLLDDPVQAYNSAFLSTNDELHTSEIDDSMSGTTAITVLVVGDTLYVANVGDSRAVIAVKEGNCVLAKDLSNDQTPFRKDEYERVKLCGARVLSVDQVEGLVDPDIQCWGDEESQGGDPPRLWVQNGLYPGTAFTRSIGDSTAEKIGVNAVPEVLVCQLNPNHLFFVVASDGVFEFLSSQTVVDMASSYADPQDACTAIAAESYKLWMEHENRTDDITIIIVHIKGLSNV 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1782620 1785823 - Hsped.03g01470.1 Hepe03g0147 565145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0147 353 SMART PP2C_4 53 345 IPR001932 -
Hepe03g0147 353 Pfam Protein phosphatase 2C 80 325 IPR001932 -
Hepe03g0147 353 SUPERFAMILY PP2C-like 49 349 IPR036457 -
Hepe03g0147 353 ProSiteProfiles PPM-type phosphatase domain profile. 57 347 IPR001932 -
Hepe03g0147 353 PANTHER PROTEIN PHOSPHATASE 61 345 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe03g0147 353 CDD PP2Cc 73 347 IPR001932 -
Hepe03g0147 353 ProSitePatterns PPM-type phosphatase domain signature. 93 101 IPR000222 GO:0043169(InterPro)
Hepe03g0147 353 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 52 349 - -
Hepe03g0147 353 Gene3D - 50 349 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0147 Hepe-Chr3:1782620 Hepe08g0522 Hepe-Chr8:4577549 1.44e-24 dispersed
Hepe09g0786 Hepe-Chr9:7670562 Hepe03g0147 Hepe-Chr3:1782620 3.38e-138 transposed
Hepe03g0147 Hepe-Chr3:1782620 Hepe05g1505 Hepe-Chr5:64546973 1.13e-190 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0147 - - - 0.0