Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0156 ATGCAGTCTGATCAGAGAAGAAAGTCGTCTCTAGAGGTGGATTTCTTCACGGAATATGGTGAAGGGAGCAGGTATAGAATAGAGGAAGTAATTGGTAAAGGAAGTTATGGTGTTGTTTGCTCTGCATATGATACTCATACTGGGGATAAAGTTGCAATTAAAAAAATCAATGATATCTTTGAGCATGTCTCTGATGCAACTCGCATTCTTCGTGAGATAAAACTTTTAAGACTATTGAGACATCCAGACATTGTGGAGATAAAGCACATCCTACTACCTCCATCTAGAAGGGAATTCAAGGACATTTATGTTGTGTTTGAGCTCATGGAATCTGATCTACACCAAGTTATTAAAGCAAATGACGATTTGACGCCAGAACATTACCAGTTCTTTCTTTACCAGCTTCTTCGAGGCATGAAATATATACACACAGCAAATGTCTTCCACCGGGACCTAAAGCCCAAAAATATCTTAGCCAATGCTGACTGCAAACTCAAGATCTGTGACTTTGGTCTAGCAAGAGTTGCTTTTAATGATACTCCCACTGCTATTTTCTGGACTGACTATGTAGCAACAAGGTGGTACCGAGCTCCTGAACTGTGTGGTTCATTTTTCTCAAAGTATACACCAGCAATAGATATATGGAGCATTGGTTGCATCTTTGCGGAGCTTTTAACTGGAAAACCACTTTTCCCTGGAAAGAATGTTGTCCACCAATTAGATTTGATGACAGATTTTCTGGGAACCCCAAATGCAGAAGCCATTGCCAGGGTACGAAACGAGAAAGCTCGGAGATACTTGAGCAGTATGCGAAAGAAGAAGCCTGTTCCTTTCTCCCAGAAGTTTCCTCATGCAGATCCACTTGCACTTCGCTTATTGGAAAGAATGTTGGCTTTTGAACCAAAGGATCGACCTACAGCAGAGGAGGCCCTTGCAGATCCATATTTTAAAGGCTTAGCGAAGGTAGAGAGAGAGCCATCTGCTCAACCTGTTACTAAGATGGAATTTGAATTTGAGAGACGAAGGATAACCAAAGAAGATGTTAGGGAGCTTATTTACCGAGAGACTCTCGAGTACCATCCAAAGATGTTGAAGGAATTCTTAGATGGATCAGAACCTACTGGTTTCATGTATCCAAGTGCAGTTGACCATTTTAAGAAGCAATTTGCCTACCTTGAGGAACACTATGGAAATGGTGCAACTGTCGCTCCTCCTGAACGACAACATGCATCCTTGCCTCGGCCATGTGTTTTATATTCAGATAACATGGTGCAGAACTCGGCACAAGTTGCAAAGGACCTATCCAAATGCTCCATCAAAGAAGTTGAGAGGCCACAACCACAAGTGGATAGGACTTGCAATATTCCTTTGGCTAGAGTTCCTATTCAAGTTCCTCAATCTATTCAAGCTGGCAATGGTGCAAGACCTGGAAAAGTTGTTGGCTCTGTGTTGCGATACAACAACTGTGGAGCAACAGCAGCAGCAGTGGCACCAGAAGTTCTTGAACAGCGGAGGATGACCAGAAACCCTTCCGTTCCACCACAGTACGCCGCTAATAACTGTTCGTATCCAAGAAGAAACTCGTCCTGTAAAAATGAAAGGACTGAGGATGAAGCCATTGAAGGTCCAAATGGGTTGCAGCCAAAACCTCCTCAGTACATACCTAGAAAAGTTGCTGCTGCCCAAGGCGGACCAGGAAATAGCTGGTACTGA 1713 43.08 MQSDQRRKSSLEVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGDKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGMKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPNAEAIARVRNEKARRYLSSMRKKKPVPFSQKFPHADPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYRETLEYHPKMLKEFLDGSEPTGFMYPSAVDHFKKQFAYLEEHYGNGATVAPPERQHASLPRPCVLYSDNMVQNSAQVAKDLSKCSIKEVERPQPQVDRTCNIPLARVPIQVPQSIQAGNGARPGKVVGSVLRYNNCGATAAAVAPEVLEQRRMTRNPSVPPQYAANNCSYPRRNSSCKNERTEDEAIEGPNGLQPKPPQYIPRKVAAAQGGPGNSWY 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1882401 1888643 - Hsped.03g01560.1 Hepe03g0156 565154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0156 570 MobiDBLite consensus disorder prediction 508 528 - -
Hepe03g0156 570 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0156 570 MobiDBLite consensus disorder prediction 506 570 - -
Hepe03g0156 570 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Hepe03g0156 570 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Hepe03g0156 570 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 22 357 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Hepe03g0156 570 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524(InterPro)
Hepe03g0156 570 FunFam Mitogen-activated protein kinase 15 119 - -
Hepe03g0156 570 SMART serkin_6 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0156 570 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0156 570 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Hepe03g0156 570 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0156 570 FunFam Mitogen-activated protein kinase 111 339 - -
Hepe03g0156 570 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0047 Hepe-Chr2:604593 Hepe03g0156 Hepe-Chr3:1882401 2.65e-251 dispersed
Hepe03g0156 Hepe-Chr3:1882401 Hepe08g0618 Hepe-Chr8:5410052 2.93e-206 dispersed
HepeContig178g0002 Hepe-ChrContig178:55372 Hepe03g0156 Hepe-Chr3:1882401 5.28e-10 dispersed
Hepe03g0156 Hepe-Chr3:1882401 Hepe09g0380 Hepe-Chr9:3381297 1.25e-253 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72634 PF00069 Pkinase 9.80E-68 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0156 - - - 0.0