Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0164 ATGACTCATGTTGAGGTGGTCCGTGACGTTAGGCCGATGACCTCATGTCGAAGCGGTGGTTACGCGGCTAGGTTTCTCCGGGTGGTCCGGAAGAGGATCCCATTTCTTATCGGTCCAATTCTGCTACAAACTCGCAAATTTCCCGGGGAAGGAAAAGAAAGAACATATAGGACTCGGTTTTTGTTTTCGACTATGGCAACGGATCAGGATGTTTTGAGTGATCGATTATCTGCGCTATGGAACATCATTGGTCTAAGGAGAGGCCTTAAAGATGACATGATTCCTTGCCAAATTGAAGAGGGTCTGTTCTTAGGTTCTATTGGAGCTGCCCATAATAGGGATCAACTGAAGAAATTGAACATCACTCACATTTTAACCATTGCTTGTTCCTTTCCACCTGCTGATCCAAATGATTTTATATATAAAGTAGTTGGTGTCTTGGACACTAGAGATGCAGATATTAAACAGCATTTCAACGGTTGTTTCAATTTTATCGACGAAGGAAGACGATCTGGAGGGGTTTTGGTTCATTGCTTTGCTGGAATATCCAGAAGTGTAACCATAACAGTTGCCTATCTAATGAAAAAGCGCGATTTGAATCTAACTCAAGCATTGGAATATGTCAAAAGTAGACGACCACGGGCAGCTCCGAATGTCGGTTTCATGGCTCAACTCAAGGACTTCGAAACAGCTCTTCGAGCAGCTGCAGATGACTTCCATTTACAACAGAATCAGGTAAAGCTCTTGAGACACTAG 756 43.39 MTHVEVVRDVRPMTSCRSGGYAARFLRVVRKRIPFLIGPILLQTRKFPGEGKERTYRTRFLFSTMATDQDVLSDRLSALWNIIGLRRGLKDDMIPCQIEEGLFLGSIGAAHNRDQLKKLNITHILTIACSFPPADPNDFIYKVVGVLDTRDADIKQHFNGCFNFIDEGRRSGGVLVHCFAGISRSVTITVAYLMKKRDLNLTQALEYVKSRRPRAAPNVGFMAQLKDFETALRAAADDFHLQQNQVKLLRH 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2072291 2077061 - Hsped.03g01640.1 Hepe03g0164 565162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0164 251 FunFam Dual specificity phosphatase 12 96 249 - -
Hepe03g0164 251 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 91 233 IPR029021 -
Hepe03g0164 251 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 137 213 IPR000387 GO:0016311(InterPro)
Hepe03g0164 251 ProSiteProfiles Dual specificity protein phosphatase domain profile. 94 234 IPR020422 GO:0006470(InterPro)
Hepe03g0164 251 SMART dsp_5 94 231 IPR020422 GO:0006470(InterPro)
Hepe03g0164 251 CDD DSP 95 227 - -
Hepe03g0164 251 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 71 232 - GO:0004721(PANTHER)|GO:0008330(PANTHER)|GO:0017017(PANTHER)|GO:0033550(PANTHER)|GO:0043409(PANTHER)
Hepe03g0164 251 Pfam Dual specificity phosphatase, catalytic domain 102 230 IPR000340 GO:0016311(InterPro)
Hepe03g0164 251 Gene3D Protein tyrosine phosphatase superfamily 89 243 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0164 Hepe-Chr3:2072291 Hepe05g0850 Hepe-Chr5:23961253 4.21e-19 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0164 - - - 0.0