Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0174 ATGCAAGATTTCTTCGGATCTGTCCGTCGATCCTTGGTGTTTCTAGCTCCCGACGGTGACGACAATGGGAGGTTCGGCGGCCTTGTCGAGAAGATCGGCTCCAGCATCCGTAAATCTCGAAATGGCCTGTTTTCTAAGCATCATTCAGTGCGTGCTCTTCCTCCGGTTGCGAAGGAAGATGCGTCTCCGATTTGGTGGCGGAAGGGAGAGTTGATCGGTTGCGGCGCTTTTGGTCGAGTTTATATGGGGATGAATCTCGATTCTGGAGAGCTTCTTGCTGTCAAACAAGTCTCAATTGCGGCTAATAGTGCTTCAAGGGAGAAAACGCAAGCTCAAGTACGGGAGCTGGAGGAGGAAGTGAAGCTTTTGAAGAATCTTTCTCACCCCAATATTGTGAGATATCTGGGAACTGCTAGAGAGGAAGATTCATTAAATATTCTATTGGAGTTTGTTCCTGGAGGATCAATATCATCTCTGTTAGGGAAATTTGGGTCTTTCCCTGAGTCTGTTATAATAACCTACACGAAGCAGCTATTATTGGGACTTGAGTACCTTCATAAGAACGGCATCATGCATAGGGATATAAAGGGTGCAAATATTCTTGTAGACAATAAGGGGTGTATTAAACTCGCAGATTTTGGTGCATCCAAGAAAGTGGTTGAGCTGGCAACTATAAATGGAGCCAAATCAATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTTATTCTCCAGACTGGACATAGCTTCTCTGCTGATATATGGAGTGTGGGGTGTACTGTTATTGAAATGGCAACAGGGAAACCTCCATGGAGCCAGCAGTATCAAGAGGTTGCTGCTCTTTTCCATATAGGGAATACTAAGTCCCATCCGCCCATTCCTGACCATCTATCTGCTGAGGCAAAAGATTTTCTGTTAAAATGTTTACAAGAGGAACCAAACTCAAGGCCTACTGCATCAGACTTGCTGCAGCATCCGTTTGTCTCATGTGAGTATCGAGATCCTCATGCAGCAGTCCGTGCCTCTTCTGTGGAATCTAGGAAACAGATGGCTGATTCTAGGCTGAATTCTAATGATCTAACAAAGTCTACAATCCAACGTTCAACCTGTGTAGGCTTGAAGGATATTTGTGAAATGGGTAGCAGCTTGAGGTGCTCTTCTGTATTTTCTGGGAACTATGGGTCACGGGACAACTGGGGCTCGAGCAATTTTGAGGATGACATGTGCCAGATAGATGATAAAGATCTGTTTGTTAGTTCATCAATAAAGTACAAACCTATTATATCATCATCAAACGATTTGAATAAGAGTTTCAATCCTATGTGTGAACCCACTGATGATGACTGGGCGTGTAAATTGGATGAGAGCTCAGAGTTGGGAGGCAAATTAATGGAATTGTCTGGCATTCAAACTGGCAAGGAATCTACTAGTAAGGGGAATGACTTCACTTTTCCATGTGGTCAATCAGCAGCTGAGGATGATGAAGAGGTTACGGAGTCGAAAATTAAAGCCTTCCTGGATGAGAAGGCTTTAGAACTGAAGAAGCTGCAAACACCTTTATACGAAGAGTTCCGCAGCACAACCAATGCAGCTAATTCTTTAGGAGCAGTTGGAATTGAGAATAGAAAGAGTGTATCTAAGTTTTTAAAATTTCCTCCCAAATCTGGGTCACCAAGTAAGCTGCGTGGTAAAAGACTCTCATCAATTGATGCGGGTAACTGTTCCAGCCGTCAGAGCCGTATAAAACAAGCTAGCATGTTGCAAGATCGAGCTCTGCAGGAAATTCAGTCACCTCAGGTTGGAGAATGGAACAAATTGCTTCATACACAGCCAGAGTCTTGCATACCAAGTTTCGAAGAGAGACAAAGGAAATGGAAAGAAGAGCTCGAGGAAGAACTTAAAAGGAAGCGAGAAATGATGCGGAGAGGAATTGTAGAGTAA 1941 43.89 MQDFFGSVRRSLVFLAPDGDDNGRFGGLVEKIGSSIRKSRNGLFSKHHSVRALPPVAKEDASPIWWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVSIAANSASREKTQAQVRELEEEVKLLKNLSHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIITYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGNTKSHPPIPDHLSAEAKDFLLKCLQEEPNSRPTASDLLQHPFVSCEYRDPHAAVRASSVESRKQMADSRLNSNDLTKSTIQRSTCVGLKDICEMGSSLRCSSVFSGNYGSRDNWGSSNFEDDMCQIDDKDLFVSSSIKYKPIISSSNDLNKSFNPMCEPTDDDWACKLDESSELGGKLMELSGIQTGKESTSKGNDFTFPCGQSAAEDDEEVTESKIKAFLDEKALELKKLQTPLYEEFRSTTNAANSLGAVGIENRKSVSKFLKFPPKSGSPSKLRGKRLSSIDAGNCSSRQSRIKQASMLQDRALQEIQSPQVGEWNKLLHTQPESCIPSFEERQRKWKEELEEELKRKREMMRRGIVE 646
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2182525 2187262 + Hsped.03g01740.1 Hepe03g0174 565172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0174 646 FunFam Serine/threonine-protein kinase STE11 62 156 - -
Hepe03g0174 646 ProSiteProfiles Protein kinase domain profile. 66 328 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0174 646 FunFam Mitogen-activated protein kinase kinase kinase 2 65 357 - -
Hepe03g0174 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g0174 646 Coils Coil 99 126 - -
Hepe03g0174 646 SUPERFAMILY Protein kinase-like (PK-like) 66 346 IPR011009 -
Hepe03g0174 646 Gene3D Transferase(Phosphotransferase) domain 1 66 368 - -
Hepe03g0174 646 Coils Coil 622 646 - -
Hepe03g0174 646 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 57 330 IPR050538 -
Hepe03g0174 646 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524(InterPro)
Hepe03g0174 646 Pfam Protein kinase domain 67 328 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0174 646 CDD STKc_MAPKKK 66 328 - -
Hepe03g0174 646 SMART serkin_6 66 328 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0174 646 MobiDBLite consensus disorder prediction 552 577 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0174 Hepe-Chr3:2182525 Hepe04g1109 Hepe-Chr4:65970456 3.37e-85 dispersed
Hepe03g0692 Hepe-Chr3:16715143 Hepe03g0174 Hepe-Chr3:2182525 1.21e-06 dispersed
Hepe09g1055 Hepe-Chr9:11234075 Hepe03g0174 Hepe-Chr3:2182525 3.19e-22 dispersed
Hepe02g1189 Hepe-Chr2:14944239 Hepe03g0174 Hepe-Chr3:2182525 1.11e-69 transposed
Hepe04g1144 Hepe-Chr4:66564957 Hepe03g0174 Hepe-Chr3:2182525 8.73e-18 transposed
Hepe04g1431 Hepe-Chr4:69966917 Hepe03g0174 Hepe-Chr3:2182525 8.13e-30 transposed
Hepe06g1043 Hepe-Chr6:58583934 Hepe03g0174 Hepe-Chr3:2182525 3.01e-33 transposed
Hepe07g1139 Hepe-Chr7:22777845 Hepe03g0174 Hepe-Chr3:2182525 7.16e-27 transposed
Hepe07g1140 Hepe-Chr7:22778192 Hepe03g0174 Hepe-Chr3:2182525 5.06e-20 transposed
Hepe08g1007 Hepe-Chr8:9592925 Hepe03g0174 Hepe-Chr3:2182525 1.58e-33 transposed
Hepe08g2334 Hepe-Chr8:63540235 Hepe03g0174 Hepe-Chr3:2182525 1.96e-92 transposed
Hepe03g0174 Hepe-Chr3:2182525 Hepe08g2381 Hepe-Chr8:64277137 7.05e-26 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72635 PF00069 Pkinase 1.80E-72 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0174 K20606 - csv:101217427 1093.95