Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0177 ATGACGATGGCGATACCAGGGAGCATTGTCGCTGTTCTTCTCCTTATGTTGCTTTTCATCATCCTCCTCTTCCTCATTGCCTGCAAACCATGGCGTTTTTTTCCCTATTCTCGTTCTCGCACTATCAAGGTTCCTGACCTTGAGAGACCCCTTGTCTCTGATGATGCGGATGTCACTCAAAACCAATTCAATGAGCTTCCCAGGGATTATGATTTGGAGGGTGCACTCCAAACTGATGGACATTTTCGGTCCCCAAGATTACACGGGTTGATCCATAAACAAAGACTGCCAGCTGCATCTCCCCTTTCAAGTCAAGGTGATAGATTGGTTTCAGATGTAGTTCCCGAACCTTTAGAAGATATTTCGGTTGGTCAAACACTTAAACGCACTCACTTCGCCAACCAGATTCCAGAAGTTCAAAAGCATGCAAAATTGAGCCTAGGAAGTGATCAACTCCACGAAATTGCAAGTCAAGCTATCTCACATGGAAGAAGTTACCTCACTTTGGAGGTTACCTCCGGTCCTTCTCGTGGAGTGCGTTATTCCATACATTCTGCGAACACCCCTAGGCTTCCATTGACTCTTGGAAGAGTACCTCCTAGTGATTTACAGTTGAAGGATTCAGAAGTCTCAGGGAAGCATGCCTTGATAAAATGGAATCTAAATAGTATGAAATGGGAGCTTGTGGACCTGGGTAGCTTAAATGGCACCTTATTAAATTCTCAACCAATCAACAATCCTGATTCTGGAAGTAGACAATGGAGTGTCCCAATGGAGCTTGCAAATGGAGATGTTATAACTCTTGGTACAACCTCCCAAGTGTATGTTGATATTACATCTCAGATTGAGAACCATATTCCCTTTGGATTTGGTTTGGCTTCAGATCCAATGGCTTTACGTCGAGGTGCAAAGAAGCTTCCCATGGAAGATGTTTGCTATTATCAATGGCCTCTTTCTGGGGTTGATCAGTTTGGACTCTTCGGTATCTGCGATGGACATAGTGGAGTAGGGGCTGCCAAATCTGCTAGCGAGATTCTTCCGGAGAAGATTGCCACAATTCTATCTGATCCACTGAAAAGGGAGAGGGTAGTATCTCTTCGCGATGCTTCAGATGTTCTTAGAGAAGCATTTTCTCAGACTGAAGCTTGCATGAATCACTATTATGAGGGTTGTACTGCCACGGTGCTTTTGGTATGGGCTGATAATGATGATAATTACTTTGTGCAATGTGCTAATCTTGGGGACTCTGCTTGTGTTCTGAATGTTCATGGGAAGCAGATAAAGATGACCGAAGACCACAGAGTAACTAGCTATTCAGAACGACTCCGAATAGGACAAGCAGGAGAACCATTGAAAGATGGGGAGACACGTTTGTGCGGCTTGAACCTTGCAAGGATGCTTGGTGACAAATTTCTTAAACAACAAGACCCTCGTTTCAGTTCAGAACCTTATATAAGTGAAGTTGTCCATGTAGATCAAGGAAGCAAAGCTTTTGCAGTGATGGCAAGTGATGGCTTTTGGGATGTGATTGGTGTGAAGAAGGCAATTCAGCTGGCCATTCAGGGTAGGGAGAAATACACCACAAGTGCAGAAAATTCAGCCGAAAAGGTTGCCAATTTTTTGTTGGGGGAGGCTAGAACGCTGCGTACAAAAGATAATACTTCAATAATTTTCTTAGATTTTGAGGTTTCTGATAGTATCACTTGTTGTAAAGTTGAAGCATAA 1725 43.48 MTMAIPGSIVAVLLLMLLFIILLFLIACKPWRFFPYSRSRTIKVPDLERPLVSDDADVTQNQFNELPRDYDLEGALQTDGHFRSPRLHGLIHKQRLPAASPLSSQGDRLVSDVVPEPLEDISVGQTLKRTHFANQIPEVQKHAKLSLGSDQLHEIASQAISHGRSYLTLEVTSGPSRGVRYSIHSANTPRLPLTLGRVPPSDLQLKDSEVSGKHALIKWNLNSMKWELVDLGSLNGTLLNSQPINNPDSGSRQWSVPMELANGDVITLGTTSQVYVDITSQIENHIPFGFGLASDPMALRRGAKKLPMEDVCYYQWPLSGVDQFGLFGICDGHSGVGAAKSASEILPEKIATILSDPLKRERVVSLRDASDVLREAFSQTEACMNHYYEGCTATVLLVWADNDDNYFVQCANLGDSACVLNVHGKQIKMTEDHRVTSYSERLRIGQAGEPLKDGETRLCGLNLARMLGDKFLKQQDPRFSSEPYISEVVHVDQGSKAFAVMASDGFWDVIGVKKAIQLAIQGREKYTTSAENSAEKVANFLLGEARTLRTKDNTSIIFLDFEVSDSITCCKVEA 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2219662 2226930 + Hsped.03g01770.1 Hepe03g0177 565175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0177 574 ProSiteProfiles Forkhead-associated (FHA) domain profile. 193 244 IPR000253 GO:0005515(InterPro)
Hepe03g0177 574 SUPERFAMILY PP2C-like 300 561 IPR036457 -
Hepe03g0177 574 Gene3D - 296 564 IPR036457 -
Hepe03g0177 574 Pfam Protein phosphatase 2C 303 554 IPR001932 -
Hepe03g0177 574 Pfam FHA domain 194 269 IPR000253 GO:0005515(InterPro)
Hepe03g0177 574 FunFam Protein phosphatase 2C 70 297 568 - -
Hepe03g0177 574 PANTHER PROTEIN PHOSPHATASE 2C 300 561 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Hepe03g0177 574 SMART FHA_2 192 244 IPR000253 GO:0005515(InterPro)
Hepe03g0177 574 SMART PP2C_4 283 559 IPR001932 -
Hepe03g0177 574 CDD FHA_PP2C70-like 167 276 - -
Hepe03g0177 574 CDD PP2Cc 301 561 IPR001932 -
Hepe03g0177 574 ProSiteProfiles PPM-type phosphatase domain profile. 289 561 IPR001932 -
Hepe03g0177 574 Gene3D - 161 295 - -
Hepe03g0177 574 SUPERFAMILY SMAD/FHA domain 166 276 IPR008984 GO:0005515(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0177 K01090 - csv:101217195 1003.43