Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0197 ATGAATGGTGCTACAACAACAACAACAACTTCTGAACCAGACAACTCTGAATATGTCGAAGTTGATCCCACAGGAAGATATGGAAGATACAATGAAGTTCTTGGCAAAGGAGCATCAAAGACAGTTTACAGAGCTTTCGATGAGTACGATGGAATTGAAGTTGCATGGAATCAAGTGAAGCTCAGCGATTTTCTTCAAACTCCTGAAGATCTCGAAAGGCTGTACAGAGAAATCCATTTGTTGAAGACTCTAAATCACAACAACATAATGAAATTCTGTTCTTCTTGGGTTGACACTGAGAATAGAAACATTAACTTTGTGACAGAGATGTTCACTTCTGGAACTCTCAGACAATACAGGCTGAAGCATAAGAGAGTCAATATAAGAGCTGTGAAGCATTGGTGCAGACAGATTTTAAGAGGTCTTCACTATCTTCATAGCCATGACCCGCCTGTGATCCACAGAGATCTCAAATGTGACAATATTTTTGTCAATGGGAATCAAGGGGAAGTCAAAATTGGTGATCTTGGCCTTGCTGCGATCCTTCGTAAATCCTACGTCGCCCGATGTGTTGGAACACCAGAGTTTATGGCTCCAGAGATTTATGAAGAGGAGTACAATGAATTGGTGGATATATATTCTTTTGGAATGTGCATTTTGGAGATGGTTACCTTTGAATATCCATACAGTGAATGCAACCACCCTGCTCAGATTTACAAGAAAGTTAGCTCGGGGAAGAAACCGGATGCTTTGTATAAGGTAAGGGATCTCGAGGTTCGGTATTTCGTCGAGAAATGCTTGGCTACTGTATCAACTAGGCTCTCTGCTAGGGAACTTTTGAATGATCCTTTTCTTCAAATTGATGGTTGTGATTCCTTGCTGAGGCCAGTAGACTACTATTCAGAATATGATGAAGTGAACAATTCCCTTATTAGAGGGCCTCTTTATGGAAATCCTCATGGTCCTTTGGCTAATGGGTATGTGAATTATTTTGGTCACGAGGCTGGGAATGTTTTGGATTACTACTGTTCGATCGATAACGAAGCAAGGGAAATCGATCTTTTCTCTTGTCAAGAGGATGAGCATTTGGCAGATGTTGATATCACAATTAAAGGGAGAAGAAGAGGTGACGACGATATATTTCTACGACTTCGAATTGCAGATAAAGAAGGTCTGATTCGAAACATTTACTTCCCTTTTGATTTAGAGAATGACAATGCTTTGAGTGTTGCAAATGAGATGGTTTCTGAGCTTGACATTACTGATCAAGATGTGAAGAAGATTGCTGATATGATAGATGGGGAAATTGCTACATTGGTGCCAGAGTGGAAGAGGGGAACAAGCTTAGAGGAAACTCCAGATTGCAATGCTTCTAATGTTTGTCACAATTGTGCTATAAATAGTTCTCTTTTGGATTACGTTTCGCCACATCATCCCGCGACGAAGAACCTACACATTCTTCAGTGTTCTGAAGAGCATGGTTGTGCTTCCATCCATGGCCGTTTTGAAGAGATCACATACCAAGTTGAGGGGTCAGAACAATTCAATGGAGACGAAAACTTGCGTAGAACATCGGAGAATTCAAGCGATATCCATTACGCTGATATTTGGGCGCAACGAGATGCACCAGAAGACAGTTGCAATGAATCACATGGAACAGTGGAGCAGCCAAAACTAGAGAAGGAGGGAAGAATTGTAAATATGGACAATCATCAAAGAGAATTCCAAACAAGAAACTCTAGCTCATCGAATCCTTCGGAGTCCCTTGTCGATGATCACGAGAACGAAATTCGACAAGAACTCAGATGGCTCAAGGCTAAATATCAAATGCAGTTGAGGGAGCTAAGGGATCAACAATTAGGAGTCAAAACCAAATCTTTTATCTTGCACCCAAATCCCAACCTCGCTGATACCGACATCGGAGCTACGGTATCTTTGCTCTCACCAAACTTCAATGAAGCAAAATATAAGGATCTCCTAACATCTCTTTCCTTTGGCAAGAACATCGCTTCGCATTCCCCCCATGATGCTGATAACATTTTAGAAAACCGAACCTTTCAAGACGAAAACGTCGTCGACGAGTCGAGTAGTCCCAAGATGATGTTTACTGCCAAGAGTTTCTATGCAGGATCATTGTTTCCACATTCTCTTCAAAGAGCAACCTCCCTTCCTGTTGATGCTATAGACTTTTAG 2193 41.31 MNGATTTTTTSEPDNSEYVEVDPTGRYGRYNEVLGKGASKTVYRAFDEYDGIEVAWNQVKLSDFLQTPEDLERLYREIHLLKTLNHNNIMKFCSSWVDTENRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILRGLHYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSYVARCVGTPEFMAPEIYEEEYNELVDIYSFGMCILEMVTFEYPYSECNHPAQIYKKVSSGKKPDALYKVRDLEVRYFVEKCLATVSTRLSARELLNDPFLQIDGCDSLLRPVDYYSEYDEVNNSLIRGPLYGNPHGPLANGYVNYFGHEAGNVLDYYCSIDNEAREIDLFSCQEDEHLADVDITIKGRRRGDDDIFLRLRIADKEGLIRNIYFPFDLENDNALSVANEMVSELDITDQDVKKIADMIDGEIATLVPEWKRGTSLEETPDCNASNVCHNCAINSSLLDYVSPHHPATKNLHILQCSEEHGCASIHGRFEEITYQVEGSEQFNGDENLRRTSENSSDIHYADIWAQRDAPEDSCNESHGTVEQPKLEKEGRIVNMDNHQREFQTRNSSSSNPSESLVDDHENEIRQELRWLKAKYQMQLRELRDQQLGVKTKSFILHPNPNLADTDIGATVSLLSPNFNEAKYKDLLTSLSFGKNIASHSPHDADNILENRTFQDENVVDESSSPKMMFTAKSFYAGSLFPHSLQRATSLPVDAIDF 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2532869 2536461 + Hsped.03g01970.1 Hepe03g0197 565195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0197 730 Gene3D Transferase(Phosphotransferase) domain 1 111 290 - -
Hepe03g0197 730 FunFam Probable serine/threonine-protein kinase WNK1 13 109 - -
Hepe03g0197 730 MobiDBLite consensus disorder prediction 574 593 - -
Hepe03g0197 730 MobiDBLite consensus disorder prediction 574 588 - -
Hepe03g0197 730 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g0197 730 SMART serkin_6 28 285 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0197 730 Coils Coil 598 618 - -
Hepe03g0197 730 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0197 730 CDD STKc_WNK 26 285 - -
Hepe03g0197 730 Gene3D - 379 467 - -
Hepe03g0197 730 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 618 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Hepe03g0197 730 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 381 436 IPR024678 GO:0004674(InterPro)|GO:0005524(InterPro)
Hepe03g0197 730 Gene3D Phosphorylase Kinase; domain 1 12 109 - -
Hepe03g0197 730 ProSiteProfiles Protein kinase domain profile. 28 285 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0197 730 FunFam probable serine/threonine-protein kinase WNK9 111 290 - -
Hepe03g0197 730 SUPERFAMILY Protein kinase-like (PK-like) 31 286 IPR011009 -
Hepe03g0197 730 MobiDBLite consensus disorder prediction 542 565 - -
Hepe03g0197 730 MobiDBLite consensus disorder prediction 1 17 - -
Hepe03g0197 730 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0197 Hepe-Chr3:2532869 Hepe09g1530 Hepe-Chr9:40128449 3.11e-218 dispersed
Hepe06g1447 Hepe-Chr6:65035686 Hepe03g0197 Hepe-Chr3:2532869 1.30e-146 transposed
Hepe07g2195 Hepe-Chr7:66352175 Hepe03g0197 Hepe-Chr3:2532869 1.82e-164 transposed
Hepe03g0197 Hepe-Chr3:2532869 Hepe08g2395 Hepe-Chr8:64430223 8.12e-244 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72636 PF00069 Pkinase 3.70E-50 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0197 K08867 - csv:101210511 1269.6