Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0226 ATGAGTGCTGGCACGGCGACGTTCCGGTCTATACTCGACAAACCCCTCAACCAGTTGACGGAGGATGACATTTCGCAGCTCACTCGAGAGGATTGTCGCAAATACCTAAAAGAAAAAGGAATGCGGCGGCCCTCGTGGAACAAATCTCAGGCGATCCAGCAAGTTATTTCTCTCAAAGCATTGCTTGAACCTTGTGATGATTCCGGCGCCGGTGCTCTCAGGAAGGTCGTCGTTTCTCCTCGGGTGATTTCAAATCAAGGTGATTCACCCAAAGAACCGAGTGATGATGCTCAGATTACATTGTCAGTTGATGAATCTGCTTATAGCAATGTGGAGACTGCAAAATCTACTCCTGAGGATCCACCGGCTGAACCAGACAACAAGGTCACCAGTCCCAGAGATCAATGCGATGCAAATGGAGTGGATGGCCAAATGACCATTTTCTATTGTGGCAAGGTGAATGTGTATGATGGAGTTCCACCAGATAAGGCATGGGCAATCATGCATCTCGCAGCTAGTCCAATTCATTTCCCTCAGAATCACCCCTTGGGTGGAACTGCTGCATGTCAGTCTCCACCTTGTCTTTTGCAGTCTGCCAACGAGAGAGATGACTTTTTTCCTCCTAGTGCTAATATCTATCGAAATGTGCATACAGAGAAGATGGTTGAGTACCCTCAGCAGCAGCATGTAAAAGGAACGGGTACTCGAGATTCTGATGTTGAGGGTCAGGCGAGTCGGAAAGTTTCATTACAGAGATACCTTGAAAAGCGAAAAGACAGGGGAAGGTTAAAGAACAAGAAAAATACAGGATTGTCTTCTTCTAGCTTGGAGGGGTATATGAACCATCAAATGAGAACGCACATACCCAATAAAGATTTAGGTCAGATTGTGACAAGCTCTTTATCCCCACCTGGAGTTGCAACAGCCTTCGTTGGAACAGCTGACAATCTGCCAAAACTTGCATGTTTTCCTGTCGACCTTAATGTCAAAGATATCCAGGAGTGCTGA 1008 46.43 MSAGTATFRSILDKPLNQLTEDDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVISLKALLEPCDDSGAGALRKVVVSPRVISNQGDSPKEPSDDAQITLSVDESAYSNVETAKSTPEDPPAEPDNKVTSPRDQCDANGVDGQMTIFYCGKVNVYDGVPPDKAWAIMHLAASPIHFPQNHPLGGTAACQSPPCLLQSANERDDFFPPSANIYRNVHTEKMVEYPQQQHVKGTGTRDSDVEGQASRKVSLQRYLEKRKDRGRLKNKKNTGLSSSSLEGYMNHQMRTHIPNKDLGQIVTSSLSPPGVATAFVGTADNLPKLACFPVDLNVKDIQEC 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2870425 2875261 + Hsped.03g02260.1 Hepe03g0226 565224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0226 335 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 20 260 IPR040390 GO:0005634(PANTHER)|GO:0009611(PANTHER)|GO:0031347(PANTHER)|GO:2000022(PANTHER)
Hepe03g0226 335 Pfam Jas motif 244 260 IPR018467 -
Hepe03g0226 335 MobiDBLite consensus disorder prediction 103 138 - -
Hepe03g0226 335 ProSiteProfiles Tify domain profile. 138 173 IPR010399 -
Hepe03g0226 335 Pfam tify domain 144 172 IPR010399 -
Hepe03g0226 335 SMART tify_2 138 173 IPR010399 -
Hepe03g0226 335 MobiDBLite consensus disorder prediction 225 278 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55204 PF06200 tify 3.00E-15 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0226 - - - 0.0