Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe03g0239 | ATGGAGCCCGGAGGTCCACCCACCCCTCCGCCGCTCCCGCCGCTTCCCACCGGCGCCATTCTCCTCGGCAAGTACCAGTTAGGCCGATTCCTCGGCCGTGGAAGCTTCGCCAAGGTGTACCAGGCCCGTTCTCTTGTCGATAACTCCATTGTTGCCGTCAAAATCATCGACAAGAACAAAACCATCGACGCCGCCATGGAGCCCTGTATAGTCCGTGAGATCTCCGTGATGCGCCGCCTGCAGCACCATCCGAACATCCTCAGAATCCATGAAGTCATGGCGACGAAATCAAAGATCTACCTCGTCGTCGATTACGCCTCCGGCGGTGAGCTATTTGCGAAACTCCTCCGCCGTGGACGTCTGACGGAATCCACCGCTCGCCGCTACTTTCAACAACTCGTCTCTGCTCTCCATTTCTGTCACCAAAACGGCATCGCTCATCGCGACATCAAGCCTCAAAATCTCCTCCTCGACGAAGACGGTAACCTAAAGGTCTCCGACTTCGGCCTCTCGGCGTTACCAGAGCAGATCAAAGACGGAATGCTCCACACCGCGTGCGGAACTCCAGCCTACACCGCGCCGGAGGTTGTTTCCCGGCGAGGCTACGACGGTGCAAAAGCCGATGCGTGGTCCTGCGGTGTGATTCTCTTCGTTCTACTCTCCGGCCACCTCCCATTCAGCGATAACAACCTCGTGGCGATGTTCAAGAAGGTTTACCGACGGGAGTATCAATTTCCCGATTCGATTTCGAAGCCTGCCAGGCATTTGATCTTCCAATTGCTGGATCCGAATCCGAACACGAGGATGAGCATCGAGGCGTTGATGCAGCATTCGTGGTACAAGAAATCGCTGAGATCGAAGCCGCAAATCAACAACCGGAGCTTGTTCGAATCGTTAGGTAATTACAAATCTGATTTGGGGGTTTGTGGAATGAATGCTTTTGATATAATTTCAATGTCTTCTGGTTTGGATCTGTCGGGGTTGTTTGAGCCGACGGATTGTAAGAAGAGGTTCACGACGGGGGTGAGTATGGAGAAAGTGGAGGAGAGAGTTACAGAGATCGGAGGGGAATTAGGTTACAGAGTGGAGAAAGGGAAAACTGGAGCAATTGGATTGGGGAAAGGGAGGATGATTTTGTTGGTGGAGGTTTTGGAAATCACTGCTAATTTGTTGATGGTGGAAGTGAAGGTAGCTGAATCAAAAATGGAGTTTGAGAGAATGCATTGGGGGGATTTGAAAGCTAAGTTGCAGGACATTGTTGTTTCTTGGCATGCCAATGAGGCAATGTGA | 1290 | 52.09 | MEPGGPPTPPPLPPLPTGAILLGKYQLGRFLGRGSFAKVYQARSLVDNSIVAVKIIDKNKTIDAAMEPCIVREISVMRRLQHHPNILRIHEVMATKSKIYLVVDYASGGELFAKLLRRGRLTESTARRYFQQLVSALHFCHQNGIAHRDIKPQNLLLDEDGNLKVSDFGLSALPEQIKDGMLHTACGTPAYTAPEVVSRRGYDGAKADAWSCGVILFVLLSGHLPFSDNNLVAMFKKVYRREYQFPDSISKPARHLIFQLLDPNPNTRMSIEALMQHSWYKKSLRSKPQINNRSLFESLGNYKSDLGVCGMNAFDIISMSSGLDLSGLFEPTDCKKRFTTGVSMEKVEERVTEIGGELGYRVEKGKTGAIGLGKGRMILLVEVLEITANLLMVEVKVAESKMEFERMHWGDLKAKLQDIVVSWHANEAM | 429 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 3044734 | 3046121 | + | Hsped.03g02390.1 | Hepe03g0239 | 565237 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe03g0239 | 429 | Pfam | NAF domain | 311 | 364 | IPR004041 | GO:0007165(InterPro) | |
Hepe03g0239 | 429 | Pfam | Protein kinase domain | 25 | 279 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe03g0239 | 429 | Gene3D | Kinase associated domain 1, KA1 | 308 | 422 | - | - | |
Hepe03g0239 | 429 | ProSiteProfiles | Protein kinase domain profile. | 25 | 280 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe03g0239 | 429 | SUPERFAMILY | Protein kinase-like (PK-like) | 21 | 287 | IPR011009 | - | |
Hepe03g0239 | 429 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 145 | 157 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe03g0239 | 429 | ProSitePatterns | Protein kinases ATP-binding region signature. | 31 | 54 | IPR017441 | GO:0005524(InterPro) | |
Hepe03g0239 | 429 | SMART | serkin_6 | 25 | 280 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe03g0239 | 429 | CDD | CIPK_C | 312 | 413 | - | - | |
Hepe03g0239 | 429 | FunFam | Non-specific serine/threonine protein kinase | 18 | 110 | - | - | |
Hepe03g0239 | 429 | ProSiteProfiles | NAF domain profile. | 306 | 330 | IPR018451 | GO:0007165(InterPro) | |
Hepe03g0239 | 429 | Gene3D | Transferase(Phosphotransferase) domain 1 | 18 | 307 | - | - | |
Hepe03g0239 | 429 | PANTHER | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED | 20 | 400 | - | GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER) | |
Hepe03g0239 | 429 | FunFam | Non-specific serine/threonine protein kinase | 16 | 304 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g0876 | Hepe-Chr1:72863903 | Hepe03g0239 | Hepe-Chr3:3044734 | 9.85e-25 | dispersed | |
Hepe03g0239 | Hepe-Chr3:3044734 | Hepe04g0695 | Hepe-Chr4:60664754 | 4.39e-129 | dispersed | |
Hepe03g1916 | Hepe-Chr3:76208939 | Hepe03g0239 | Hepe-Chr3:3044734 | 3.42e-14 | transposed | |
Hepe09g0409 | Hepe-Chr9:3651624 | Hepe03g0239 | Hepe-Chr3:3044734 | 1.45e-13 | transposed | |
Hepe03g0239 | Hepe-Chr3:3044734 | Hepe05g1603 | Hepe-Chr5:65735092 | 4.11e-187 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72637 | PF00069 | Pkinase | 2.90E-73 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe03g0239 | K12761 | - | csv:101215156 | 787.334 |