Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0248 ATGGCTCGGGACGGGCATGTAGTGCCGGTGGATCCACAGGCCGCGCCGATCACTGTAAAGAAGAAGAAACAGTCTTCTCGGAATTGGATTCTACTGGATTGTACAGGCCAAGGCACCGTCCTCGATGTCGACAAGTATGCAATCATGCATCGAGTTCAAATTCATGCTCGAGACCTTCGGATTCTTGATCCTTTGCTTTCTTATCCCTCTACCATTTTGGGCCGTGAGAGGGCCATTGTTCTTAATCTCGAGCATATAAAGGCGATCATTACTGCTGAAGAGGTTTTACTTAGAGATCCAGCAGATGAAAATGTCATCCCTGTGGTTGAGGAGCTTCAGAGGCGATTGCCTCCTTCTAATATATTCCAGCTTCAAATTCAAGGAGATGGGAGAGAGTATCAGGGTGGGCAACAAGATGGTGAAGCGGAAGAGGATGAATCGCCATTCGAATTCCGCGCCCTCGAGGTAGCTTTGGAGGCTGTATGTAGTTTTCTTGCTGCACGGACAACTGAATTGGAGACTGCTGCTTATCCTGCCTTGGATGAGCTTACTGCCAAGATTAGTAGCCGCAACTTGGACAGAGTTCGTAAATTAAAGAGTGCAATGACCAGGTTGACTGCAAGGGTTCAAAAGGTGAGAGATGAGCTTGAACAATTACTGGACGACGACGATGATATGGCAGACCTTTACTTGTCAAGAAAGATGAGTTCATCTTCTCCTGTAAGCGGTTCTGGTCCTGCCAATTGGTTTCCTGCCTCTCCTACCATAGGTTCAAAGATCTCAAGAGCAAGCAGAGCCAGTATTGCGACTGTACGTGGGGATGAGAATGACATCGAGGAGCTTGAAATGTTGCTAGAGGCTTACTTTATGCAGATTGATGGTACATTGAACAAATTAACTACACTGCGAGAATATATCGATGACACAGAAGATTATATCAATATTCAGCTCGACAATCATCGAAATCAACTCATTCAGTTGGAGCTCTTTTTAAGTTCTGGAACTGTTTGTTTGTCTATCTATTCTTTGGTGAGTGCAATATTTGGCATGAACATTCCATACACTTGGAATGACAATCATGGATACATGTTTAAATGGGTTGTCATTGATAGTGGAGTAGCTTGCGCCCTGCTGTTCATCGCAATTGTTTACTATGCTCGCCTCAAAGGTTTGGTGGGGTCTTGA 1185 44.98 MARDGHVVPVDPQAAPITVKKKKQSSRNWILLDCTGQGTVLDVDKYAIMHRVQIHARDLRILDPLLSYPSTILGRERAIVLNLEHIKAIITAEEVLLRDPADENVIPVVEELQRRLPPSNIFQLQIQGDGREYQGGQQDGEAEEDESPFEFRALEVALEAVCSFLAARTTELETAAYPALDELTAKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKMSSSSPVSGSGPANWFPASPTIGSKISRASRASIATVRGDENDIEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVSAIFGMNIPYTWNDNHGYMFKWVVIDSGVACALLFIAIVYYARLKGLVGS 394
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 3170359 3176019 + Hsped.03g02480.1 Hepe03g0248 565246
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0248 394 Gene3D Magnesium transport protein CorA, transmembrane region 105 324 - -
Hepe03g0248 394 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 20 390 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Hepe03g0248 394 Pfam Magnesium transporter MRS2-like 274 321 - -
Hepe03g0248 394 Pfam Magnesium transporter MRS2-like 41 237 - -
Hepe03g0248 394 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 330 382 IPR045863 -
Hepe03g0248 394 Coils Coil 195 222 - -
Hepe03g0248 394 CDD Mrs2_Mfm1p-like 29 391 IPR039204 -
Hepe03g0248 394 FunFam Magnesium transporter MRS2-1 17 100 - -
Hepe03g0248 394 Gene3D - 15 100 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0248 Hepe-Chr3:3170359 Hepe07g0517 Hepe-Chr7:5459026 2.66e-86 dispersed
Hepe02g0661 Hepe-Chr2:7077724 Hepe03g0248 Hepe-Chr3:3170359 1.64e-91 transposed
Hepe02g1289 Hepe-Chr2:16151263 Hepe03g0248 Hepe-Chr3:3170359 6.98e-105 transposed
Hepe10g0575 Hepe-Chr10:6876209 Hepe03g0248 Hepe-Chr3:3170359 4.11e-79 transposed
Hepe03g0248 Hepe-Chr3:3170359 Hepe06g1965 Hepe-Chr6:70884018 1.21e-145 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0248 K16075 - csv:101203841 674.085