Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0290 ATGGAAGCTACTAGGTGTTGGTTTAATAAGTTCAGATCCAAAGACAGGCCAAAGCCCTCGACAAATAAGGAGAGTACAGGCAATGCAAGAGATGCATCGAGAGCACCAACCAGTGAAGAGATACCCTCAACTGTCACCAAGCAGAAGGTTGCAGCTGCCAAACAGTATATAGAAAACCATTACAAGAAGCAAATGAAGAGCTTGGAAGAAAGGAGGGAAAGACGCCATGTACTAGAAATGAAGTTGGCTGATGCTGAGGTCTCTCAAGAAGAGCAAAGCAACCTGCTTAAGCATCTAGAGAAGAAGGAAACGGAGTATATGCGTCTTCAGAGGCATAAAATGGGTGCTGATGATTTTGAGCCACTAACAATGATTGGGAGGGGTGCTTTTGGAGAGGTTAGAGTTTGTCGGGAGAAAGCAACTGGCCATGTATATGCCATGAAGAAGCTTAAGAAATCAGAGATGCTTCGAAGAGGCCAGGTTGAACATGTGAAAGCTGAAAGGAATCTATTAGCAGAGGTTGACAGTAATTGTATTGTAAAGCTGTACTGCTCTTTCCAAGACGAGGAGTATTTATATCTTATTATGGAATACTTACCTGGTGGAGATATGATGACTTTGCTGATGAGGAAAGATACTCTAACAGAAGACGAGGCCCGGTTTTATGTTGGTGAAACAGTTTTAGCTATCGAATCAATCCATAAACATAATTATATTCATAGAGACATCAAGCCCGATAACTTGCTTCTTGACAAGGATGGCCATATGAAATTATCAGATTTTGGACTATGTAAACCATTAGATTGTAGTAACCTCCAAGAAAAAGATTTTTCCCAGGGGAATAACCTTAGTGGTGCTCTTCAAAGTGATGGGCGTCCTGTGGCATCAAAACGCACACAACAGGAACAACTACAGCATTGGCAAAGAAACAGGCGGATGCTTGCTTATTCTACAGTTGGAACTCCTGATTATATTGCTCCGGAAGTTTTGCTGAAGAAAGGATATGGAATGGAATGTGATTGGTGGTCACTTGGTGCCATTATGTATGAAATGCTTGTGGGATTTCCACCATTCTACTCAGATGAGCCAATGTCGACGTGTAGGAAGATAGTTAATTGGAGAACTCATTTGAAATTTCCAGAAGAAGCAAAACTCTCTCCAGAAGCAAAGGATCTAATTTGTAAACTCTTATGCAATGTTGAACAAAGGCTTGGGACCAAGGGTGCAGATGAAATAAAGGCGCACTCATGGTTCAAGGGTGTTGAGTGGGACAAGTTGTATCAAATGAAAGCTGCATTTATTCCTGAGGTCAATGATGAATTGGATACTCAAAATTTTGAGAAGTTTGAAGAGACTGAAAACCCAATTCAGACGTCATCAAAAACAGGTCCATGGAGAAAGATGTTGTCATCGAAGGATATCAATTTTGTGGGTTACACGTACAAAAACTTCGAAATTGTTGACGATAATCAATTGCCTGGAATCGCTGAATTGAAGAAGAAGAGCGCAAAATCTAAAAGACCTTCCATCAAATCGCTCTTCGATAACGAATCTGCAATGGGGACCAATCAACCTGTTCAAGGTAGCTTTTTGAAACTCTTGCCTCCCCAACTAGAAGTCCCCGAGAAACCGATGAGCGCCAATGAGAAGCATTCATGA 1659 41.35 MEATRCWFNKFRSKDRPKPSTNKESTGNARDASRAPTSEEIPSTVTKQKVAAAKQYIENHYKKQMKSLEERRERRHVLEMKLADAEVSQEEQSNLLKHLEKKETEYMRLQRHKMGADDFEPLTMIGRGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKDGHMKLSDFGLCKPLDCSNLQEKDFSQGNNLSGALQSDGRPVASKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGFPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLICKLLCNVEQRLGTKGADEIKAHSWFKGVEWDKLYQMKAAFIPEVNDELDTQNFEKFEETENPIQTSSKTGPWRKMLSSKDINFVGYTYKNFEIVDDNQLPGIAELKKKSAKSKRPSIKSLFDNESAMGTNQPVQGSFLKLLPPQLEVPEKPMSANEKHS 552
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3869954 3878380 + Hsped.03g02900.1 Hepe03g0290 565288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0290 552 Coils Coil 82 102 - -
Hepe03g0290 552 CDD STKc_NDR_like 117 482 - -
Hepe03g0290 552 Gene3D Transferase(Phosphotransferase) domain 1 205 435 - -
Hepe03g0290 552 SUPERFAMILY Protein kinase-like (PK-like) 94 471 IPR011009 -
Hepe03g0290 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g0290 552 PANTHER SERINE/THREONINE-PROTEIN KINASE 33 485 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Hepe03g0290 552 Gene3D Phosphorylase Kinase; domain 1 109 204 - -
Hepe03g0290 552 MobiDBLite consensus disorder prediction 22 48 - -
Hepe03g0290 552 CDD MobB_NDR_LATS-like 53 114 - -
Hepe03g0290 552 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0290 552 MobiDBLite consensus disorder prediction 515 530 - -
Hepe03g0290 552 SMART pkinase_C_6 419 483 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0290 552 MobiDBLite consensus disorder prediction 1 48 - -
Hepe03g0290 552 FunFam Non-specific serine/threonine protein kinase 317 436 - -
Hepe03g0290 552 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0290 552 SMART serkin_6 119 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0290 552 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0290 552 MobiDBLite consensus disorder prediction 7 21 - -
Hepe03g0290 552 FunFam Non-specific serine/threonine protein kinase 90 202 - -
Hepe03g0290 552 Pfam Protein kinase domain 315 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0290 552 Pfam Protein kinase domain 121 270 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0290 552 FunFam Non-specific serine/threonine protein kinase 203 270 - -
Hepe03g0290 552 MobiDBLite consensus disorder prediction 505 552 - -
Hepe03g0290 552 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1901 Hepe-Chr1:83849529 Hepe03g0290 Hepe-Chr3:3869954 7.32e-228 dispersed
Hepe03g0290 Hepe-Chr3:3869954 Hepe04g2071 Hepe-Chr4:75535640 2.43e-272 dispersed
Hepe05g0778 Hepe-Chr5:17893442 Hepe03g0290 Hepe-Chr3:3869954 4.45e-13 dispersed
Hepe09g1783 Hepe-Chr9:56110966 Hepe03g0290 Hepe-Chr3:3869954 8.59e-16 dispersed
Hepe03g0290 Hepe-Chr3:3869954 Hepe09g0892 Hepe-Chr9:8937139 8.58e-226 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72638 PF00069 Pkinase 5.50E-65 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0290 K08790 - csv:101205120 1078.93