Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe03g0460 | ATGACCCACACCCATAGAATTTCCCAACATCAAATCCCACGTAGCGAGAGCACGATGAGTGGCGGCGGTGGCGGTGGCGGTGGCGGTAGCGGACCTTGCGGCGCGTGCAAGTTTTTGAGGAGAAAATGTGTGAAAGGTTGCATTTTTGCGCCATATTTCGACTCGGACCAAGGCACGGCCCACTTCGCGGCCGTGCATAAGGTGTTTGGAGCTAGCAATGCCTCCAAGATCCTCCTTCGCATCCCGCCTCCCAAGCGTCTCGACGCTTGCGTTACTCTTTGTTACGAGGCTCTCGCTAGGGTTCGAGACCCTGTCTATGGTTGCGTTGCCCATATCTTCTCCCTTCAGCAACAGGTAGTGAATTTGCAGGCAGAGTTAGCATACATTCAGGCCAAACTCTCCACCTTGCAACGCCTATTACCGCCGCCGCTACACAGTCCGTCGCCAAACGCTTGCCACCCTCCGCTCCCGGAAACGATACCGGGCTCCGACATGAGCTTGCTGTCTAACGTTCCAATGCTCCTTGACCCCCTGCAAACGCAGCTAGCTTTTAATGAAACCACAAATAGCTTTCTGAACCCAATTGATCATCATCAAGAGATGGATGAAGATGGTGATCTTCAATCTTTGGCTCGAGAGTTCGTTTCGAGGTATTGGCCCGGCGTAAGATTCCGGCCGCCGTGCTCTCACATTTAA | 696 | 53.59 | MTHTHRISQHQIPRSESTMSGGGGGGGGGSGPCGACKFLRRKCVKGCIFAPYFDSDQGTAHFAAVHKVFGASNASKILLRIPPPKRLDACVTLCYEALARVRDPVYGCVAHIFSLQQQVVNLQAELAYIQAKLSTLQRLLPPPLHSPSPNACHPPLPETIPGSDMSLLSNVPMLLDPLQTQLAFNETTNSFLNPIDHHQEMDEDGDLQSLAREFVSRYWPGVRFRPPCSHI | 231 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 6986410 | 6989662 | - | Hsped.03g04600.1 | Hepe03g0460 | 565458 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe03g0460 | 231 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Hepe03g0460 | 231 | Pfam | Lateral organ boundaries (LOB) domain | 32 | 130 | IPR004883 | - | |
Hepe03g0460 | 231 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 29 | 151 | - | GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER) | |
Hepe03g0460 | 231 | ProSiteProfiles | LOB domain profile. | 31 | 133 | IPR004883 | - | |
Hepe03g0460 | 231 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g0460 | Hepe-Chr3:6986410 | Hepe06g1935 | Hepe-Chr6:70569932 | 5.60e-44 | dispersed | |
Hepe03g0460 | Hepe-Chr3:6986410 | Hepe03g0462 | Hepe-Chr3:7030470 | 4.15e-52 | proximal | |
Hepe03g0460 | Hepe-Chr3:6986410 | Hepe05g1877 | Hepe-Chr5:69076213 | 2.34e-50 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55225 | PF03195 | LOB | 3.80E-36 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe03g0460 | - | - | - | 0.0 |