Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe03g0462 | ATGAGTGCCAACCCTAGTACTAGCGGCGGCGGAGGGCCGGCAACCGCCAGCGCCGGCCTCGGCGGCAGTGCCGGCGGAGGCCCATGTGGTGCCTGTAAGTTCTTGAGAAGAAAGTGTGTTCCCGGTTGCATATTCGCCCCTTATTTCGACTCCGAGCAAGGCGCTGCTCACTTTGCGGCGGTCCACAAGGTGTTCGGAGCTAGCAACGTCTCGAAACTCCTCCTTCATATCCCGGTCCACAAGCGTCTCGACGCTGTCGTCACGATTTGCTACGAGGCTCAAGCTCGCCTTCGAGACCCCGTCTATGGCTGTGTTGCTCATATATTCGCTCTTCAACAACAGGTGGTGAGTTTACAAGCCGAGCTGTCGTACCTTCAAGCCCATTTAGCAACACTGGAGCTGCCGTCGCCGCAGCACCCGCCCCTGCCACCTCCGCCGCCAAATTTTCCGGTGCAACCACAGCTCTCCATCTCAGACCTGCCGTCGGCCTCCTCCTTGCCGGCCACTTACGACTTGTCGTCGCTCTTTGACCCAATGGCTCAGCCTGCATGGGCCATGCAACAGCAGCGGCTCGACCACCGCCAGTTCGCCGGCGGCGGCGGCGGCGGCGGCTCGTCCACTGCAGTCGGAGAGGGCGACCTTCAAGCATTGGCCCGTGAACTCCTCCATAGACATGGCGCTACGCCGTGCTCCGATCCCTCCTCGCCGTCGCTATCTAAATGA | 723 | 61.27 | MSANPSTSGGGGPATASAGLGGSAGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELSYLQAHLATLELPSPQHPPLPPPPPNFPVQPQLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGGGSSTAVGEGDLQALARELLHRHGATPCSDPSSPSLSK | 240 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 7030470 | 7035329 | + | Hsped.03g04620.1 | Hepe03g0462 | 565460 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe03g0462 | 240 | ProSiteProfiles | LOB domain profile. | 27 | 129 | IPR004883 | - | |
Hepe03g0462 | 240 | Pfam | Lateral organ boundaries (LOB) domain | 28 | 126 | IPR004883 | - | |
Hepe03g0462 | 240 | MobiDBLite | consensus disorder prediction | 194 | 213 | - | - | |
Hepe03g0462 | 240 | MobiDBLite | consensus disorder prediction | 136 | 152 | - | - | |
Hepe03g0462 | 240 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 24 | 174 | - | GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER) | |
Hepe03g0462 | 240 | MobiDBLite | consensus disorder prediction | 135 | 156 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g0778 | Hepe-Chr1:71310361 | Hepe03g0462 | Hepe-Chr3:7030470 | 7.90e-45 | dispersed | |
Hepe03g0462 | Hepe-Chr3:7030470 | Hepe05g1877 | Hepe-Chr5:69076213 | 5.08e-65 | dispersed | |
Hepe03g0460 | Hepe-Chr3:6986410 | Hepe03g0462 | Hepe-Chr3:7030470 | 4.15e-52 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55226 | PF03195 | LOB | 1.90E-38 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe03g0462 | K21994 | - | csv:101220603 | 357.836 |