Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0464 ATGGATGGAATTACACCCCACAATCGTTCTCTTCCCCCTCCTTTCCTCTCCAAAGATTTCCACCTCCACCATGGATTATTCCACCACCACCATAACTCCGACGACGACAACAGCAGCGGCGGAGCTAAGAGAGACCGGGAGGAGGAAAACCCCAACACGGCGGCAGATAGCAAAGAATTATCCAATTCTTCTTCTCGACGGCCACGTGGCCGACCAGCTGGCTCCAAAAACAAGCCAAAGCCACCGATTATAATCACTAGAGACAGCGCTAACGCCCTCAGATCCCATCTCATCGAAATCTCCACCGCCTCCGACATCGTCGACTCTCTCGCCGCCTTCGCGCGGCGGCGTCAGCGTGGCGTTTGTATTTTAAGCGCCACCGGAACCGTCGCCAACGTCACTCTCCGGCAACCAGCCACCGCCGGCGCTGTCATCACCTTACATGGCAGATTTGAAATTCTCTCCCTCTCTGGCTCCTTCCTCCCGCCGCCGGCTCCCCCGGCCGCCTCTGGGCTGACCGTCTACCTGGCCGGTGGGCAGGGGCAGGTCGTTGGCGGGAATGTCGTCGGCCCACTTTCGGCGTCCGGTCCAGTGATTATTATGGCGGCTTCTTTTGGTAATGCAGCGTATGAACGGCTCCCCCTCGACGACGACGATGAAACTTCCCCGGCGGCGGAGATGGCCGGACAACAGACCCCGCCGCCACCACCGCCGCAACTGTTGGGGGATCCTAATGGGGGATTGTTTCATGGGGTGGCGCAGAATCATGTTGTGAATTCTAACTGTCAATTACCTGCGGAGGCGGCTGCCGCGGCGGCGTATTGGGGAGGAGGACGGCCACCATATTGA 849 59.01 MDGITPHNRSLPPPFLSKDFHLHHGLFHHHHNSDDDNSSGGAKRDREEENPNTAADSKELSNSSSRRPRGRPAGSKNKPKPPIIITRDSANALRSHLIEISTASDIVDSLAAFARRRQRGVCILSATGTVANVTLRQPATAGAVITLHGRFEILSLSGSFLPPPAPPAASGLTVYLAGGQGQVVGGNVVGPLSASGPVIIMAASFGNAAYERLPLDDDDETSPAAEMAGQQTPPPPPPQLLGDPNGGLFHGVAQNHVVNSNCQLPAEAAAAAAYWGGGRPPY 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7115765 7116913 + Hsped.03g04640.1 Hepe03g0464 565462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0464 282 CDD DUF296 94 161 IPR005175 -
Hepe03g0464 282 MobiDBLite consensus disorder prediction 55 70 - -
Hepe03g0464 282 MobiDBLite consensus disorder prediction 213 247 - -
Hepe03g0464 282 Gene3D - 93 223 - -
Hepe03g0464 282 ProSiteProfiles PPC domain profile profile. 90 230 IPR005175 -
Hepe03g0464 282 MobiDBLite consensus disorder prediction 27 84 - -
Hepe03g0464 282 FunFam AT-hook motif nuclear-localized protein 93 220 - -
Hepe03g0464 282 MobiDBLite consensus disorder prediction 28 54 - -
Hepe03g0464 282 SUPERFAMILY AF0104/ALDC/Ptd012-like 90 218 - -
Hepe03g0464 282 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 36 239 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0010228(PANTHER)
Hepe03g0464 282 Pfam Plants and Prokaryotes Conserved (PCC) domain 94 205 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2167 Hepe-Chr1:86318728 Hepe03g0464 Hepe-Chr3:7115765 1.78e-44 dispersed
Hepe03g0464 Hepe-Chr3:7115765 Hepe05g1880 Hepe-Chr5:69130990 1.62e-87 dispersed
Hepe03g0464 Hepe-Chr3:7115765 Hepe06g1032 Hepe-Chr6:58368338 4.27e-17 wgd
Hepe03g0464 Hepe-Chr3:7115765 Hepe07g0228 Hepe-Chr7:2171780 9.80e-23 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0464 - - - 0.0