Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe03g0480 | ATGGATAATTACGGTTCTTCACCTTCATATCCATACCACAATCCATATGCATACTCTCGTGCAGCTCCTCCTCAATACCCACCTCCATCTCAATATCCACCTCCTTCCCAATATCCACCTCATTCCCAATACCCACCTCATCCTCATTATCCACATCCAAATTCAGATCCATATGGTCGTCCTGCTTATCCTTACCCGTATAATCCTTCACATGGCACTCCATTTGCATATCCCCCACCCCCATCTCATTCCGGCTTAATAGAGTATATTCAACATCCACCTGCACATTCTGGCCCTGTAGCTTACCCGTATCCTTACTCTGATACCTCATCTACCAATAGTGGTACTAGGCCATCCATTCATTATCATAACAGTTTCCAATCTGGTTCATCCCCATTTCGGTATCAAGAATCTACTAACACATACCCACCACCTGAAAGTCAATACCCACCACCCCCTTCACGAGTAAATAGCTTCTCTGGCCATTACAGGAATGATAGCACTGATTCAATCTCTTCTGTGTCTTCTGCTTACCCGCCTATTGATGACCTTTTGTGCAATGTACATTTGACTGAACATCAACCATCTGCCCCTGCGTCACCTCCTGCCCCTGCTGCAGCAGCTGCACCTGCACCTGCACGTCCTTCAGCTTTGTTATTGATGAATACACATCAAAGTGCGAGATATGATCGGCGTGACCGATTTTATGGCTTTCCGAATTCATCCTTTTCTACTTTTGACACGGGGAATTCAGATCAAATGACTTCATCCAAGCTACCTTCGTTTTCCCATTCAAGCTCATTCAGTGGGTCTCATCGTAGTCATAACTCGCAAATTGTTCCATTGAACAGTAAAGCATCGTTGAAAGTTTTGCTGTTACATGGAAACTTAGAAATATGGGTTAATGAGGCCAAAAATCTTCCAAATATGGACATGTTTCACAAAACCTTGGGGGATATGTTCTCAAAATTACCTGGGAACATGAGCAACAAAATTGAAGGACGTGTGAGTCATAAGATCACTAGTGATCCTTACGTGTCGATCTCTATATCAAATGCAGTAATTGGGAGGACTTTTGTTATAAGCAACAATGAAAATCCTGTATGGAGGCAACATTTCTATGTTCCCGTTGCACATCATGCTGCTGAAGTAACTTTTGTCGTTAAAGACAGTGATGTTGTTGGTTCACAGCTAATAGGAACTGTAGCGATTCCTGCTGAACAAATATATTCAGGGTCTATACTTGAGGGAACCTTCCCAATCCTACTTGGTGGGAAGCCATGTAAGCCTGGAGCCGCTCTAAATGTTTCTATTCAGTATACTCCCATGGAGAGGCTTAGTACTTACCATCATGGAGTGGGAGCTGGTCCTGATTATCAGGGGGTTCCCGATACATATTTCCCCCTCAGAAAGGGTGGAGCTGTCACTCTTTATCAAGATGCCCATGTTCCAGACGGGCACCTTCCAAATTTGATGCTTGATAATGGTATGTACTATGTACAAGGGAAGTGTTGGCATGACATCTTTGATGCTGTACGTCAGGCTCGCAGGTTAATTTACATAACTGGATGGTCAGTGTGGAACAAAGTGAAACTAGTTCGAGATACTGGCTATGGGACAGAGTGTACCCTCGGAGATCTCCTGAGGTCCAAGTCCCAGGAGGGAGTGAGAGTTTTGCTTCTTGTTTGGGACGATCCCACTTCTAGGAGCATTTTGGGTTATAAAACTGATGGTTTCATGCAAACCCATGATGAGGAAACTCGCCGTTTTTTCAAACACTCCTCTGTACAGGTGATACTTTGTCCTCGCATTGCTGGAAAACGACATAGCTGGGTTAAGCAAAAGGAAGTTGGAACTATTTATACACACCATCAGAAAACAGTTATCGTGGATGCTGATGCTGGAAATAATAGAAGAAAAATCATAGCTTTTGTTGGAGGGCTCGATTTATGTGACGGGCGGTATGATACTCCATTGCATCCCATATTTCGGACACTTCAAACAGTACACAAGGATGATTACCACAATCCTACATACACGGGTAGTGTTGCTGGTTGTCCAAGAGAACCATGGCATGATCTGCACAGCAAAATTGAGGGTCCGGCAGCATATGATGTTTTGACTAACTTTGAGGAGCGATGGAGGAGGGCTTCAAAACCTCACGGGATAAAGAAGTTGAAATCATATGATGATGCTTTGCTGAGCATTGAAAGAATTCATGACATAGTTGGAATTTTTGAAGATTACGGCACTAGTGAAAATGACCCTGAATCATGGCATGTGCAGATTTTTCGCTCAATTGATTCAAGTTCTGTAAAAGATTTCCCAAAAGATCCAAAAGATGCCCCAAGCAAGAACCTTGTATGTGGAAAGAATGTGCTGATTGACATGAGTATACACACAGCATATGTGAAAGCCATTCGAGCTGCCCAACATTACATTTATATAGAGAACCAATATTTCATTGGGTCATCCTTCAATTGGAATGCAAACAAAGATATAGGTGCCAACAATTTGATTCCAATGGAAATTGCGCTAAAGATTGCTGATAAAATCAGAGCAAATGAGAGGTTTGCTGCATATATTGTCATCCCCATGTGGCCTGAGGGCGTTCCAACCGCTGCTGCCACTCAGAGAATACTATTTTGGCAGCAAAAAACCATGCAAATGATGTATGAGGTCATTTACAAGGCTTTGATGGAGGTTGGTCTTGAGGAGGCATTCTCTCCTCAAGACTATTTGAACTTCTTCTGCCTGGGAAATCGTGAGGCTATGGATGGAAATGATCCTTTATGTTCTGGAAGTCCTAGTGCAGAAAACTCCCCTCAGGCACTTAGTCGGAAAAGCAGAAGGTTTATGATATATGTTCACTCCAAAGGCATGATAGTTGATGACGAGTATGTGATTTTGGGATCTGCTAATATCAACCAGAGATCCATGGAAGGAACTAGAGACACTGAGATTGCTATGGGATCCTATCAACCTCATTATACGTGGGCAAGGAAACTTTCACATCCTCGTGGACAGATCTACGGATATAGGATGTCGTTGTGGGCGGAGCATACGGGAACTATCGAAGACTGTTTCAACCAACCGGAGAGCCTGGAATGCGTCAAAAGAGTTAGAACAATGGGAGAAATGAACTGGAAACAGTTTGCTGCAGATGATGTATCAGAGATGAGAGGACACCTTCTGAAGTACCCAGTTGAAGTTGATAGAAGAGGAAGAGTAAGATCTCTTCCTGGACATGAAAATTTTCCAGATGTAGGAGGAAAAATAGTTGGTTCATTTCTTGGAATTCAGGAGAATCTCACTATCTAA | 3321 | 43.0 | MDNYGSSPSYPYHNPYAYSRAAPPQYPPPSQYPPPSQYPPHSQYPPHPHYPHPNSDPYGRPAYPYPYNPSHGTPFAYPPPPSHSGLIEYIQHPPAHSGPVAYPYPYSDTSSTNSGTRPSIHYHNSFQSGSSPFRYQESTNTYPPPESQYPPPPSRVNSFSGHYRNDSTDSISSVSSAYPPIDDLLCNVHLTEHQPSAPASPPAPAAAAAPAPARPSALLLMNTHQSARYDRRDRFYGFPNSSFSTFDTGNSDQMTSSKLPSFSHSSSFSGSHRSHNSQIVPLNSKASLKVLLLHGNLEIWVNEAKNLPNMDMFHKTLGDMFSKLPGNMSNKIEGRVSHKITSDPYVSISISNAVIGRTFVISNNENPVWRQHFYVPVAHHAAEVTFVVKDSDVVGSQLIGTVAIPAEQIYSGSILEGTFPILLGGKPCKPGAALNVSIQYTPMERLSTYHHGVGAGPDYQGVPDTYFPLRKGGAVTLYQDAHVPDGHLPNLMLDNGMYYVQGKCWHDIFDAVRQARRLIYITGWSVWNKVKLVRDTGYGTECTLGDLLRSKSQEGVRVLLLVWDDPTSRSILGYKTDGFMQTHDEETRRFFKHSSVQVILCPRIAGKRHSWVKQKEVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDTPLHPIFRTLQTVHKDDYHNPTYTGSVAGCPREPWHDLHSKIEGPAAYDVLTNFEERWRRASKPHGIKKLKSYDDALLSIERIHDIVGIFEDYGTSENDPESWHVQIFRSIDSSSVKDFPKDPKDAPSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSFNWNANKDIGANNLIPMEIALKIADKIRANERFAAYIVIPMWPEGVPTAAATQRILFWQQKTMQMMYEVIYKALMEVGLEEAFSPQDYLNFFCLGNREAMDGNDPLCSGSPSAENSPQALSRKSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGSYQPHYTWARKLSHPRGQIYGYRMSLWAEHTGTIEDCFNQPESLECVKRVRTMGEMNWKQFAADDVSEMRGHLLKYPVEVDRRGRVRSLPGHENFPDVGGKIVGSFLGIQENLTI | 1106 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 7422899 | 7439457 | + | Hsped.03g04800.1 | Hepe03g0480 | 565478 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe03g0480 | 1106 | FunFam | Phospholipase D delta | 495 | 732 | - | - | |
Hepe03g0480 | 1106 | Gene3D | C2 domain | 266 | 438 | IPR035892 | - | |
Hepe03g0480 | 1106 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 952 | 979 | IPR001736 | GO:0003824(InterPro) | |
Hepe03g0480 | 1106 | SUPERFAMILY | Phospholipase D/nuclease | 756 | 1038 | - | - | |
Hepe03g0480 | 1106 | SMART | C2_3c | 296 | 418 | IPR000008 | - | |
Hepe03g0480 | 1106 | Pfam | Phospholipase D Active site motif | 954 | 979 | IPR001736 | GO:0003824(InterPro) | |
Hepe03g0480 | 1106 | Pfam | Phospholipase D Active site motif | 621 | 654 | IPR001736 | GO:0003824(InterPro) | |
Hepe03g0480 | 1106 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 619 | 654 | IPR001736 | GO:0003824(InterPro) | |
Hepe03g0480 | 1106 | ProSiteProfiles | C2 domain profile. | 273 | 419 | IPR000008 | - | |
Hepe03g0480 | 1106 | MobiDBLite | consensus disorder prediction | 107 | 174 | - | - | |
Hepe03g0480 | 1106 | CDD | C2_plant_PLD | 289 | 441 | - | - | |
Hepe03g0480 | 1106 | Pfam | Phospholipase D C terminal | 1026 | 1096 | IPR024632 | - | |
Hepe03g0480 | 1106 | SUPERFAMILY | Phospholipase D/nuclease | 461 | 719 | - | - | |
Hepe03g0480 | 1106 | MobiDBLite | consensus disorder prediction | 153 | 174 | - | - | |
Hepe03g0480 | 1106 | MobiDBLite | consensus disorder prediction | 21 | 81 | - | - | |
Hepe03g0480 | 1106 | Gene3D | Endonuclease Chain A | 496 | 732 | - | - | |
Hepe03g0480 | 1106 | MobiDBLite | consensus disorder prediction | 247 | 276 | - | - | |
Hepe03g0480 | 1106 | Pfam | C2 domain | 295 | 420 | IPR000008 | - | |
Hepe03g0480 | 1106 | FunFam | Phospholipase D | 766 | 998 | - | - | |
Hepe03g0480 | 1106 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 293 | 443 | IPR035892 | - | |
Hepe03g0480 | 1106 | MobiDBLite | consensus disorder prediction | 107 | 143 | - | - | |
Hepe03g0480 | 1106 | SMART | pld_4 | 619 | 654 | IPR001736 | GO:0003824(InterPro) | |
Hepe03g0480 | 1106 | SMART | pld_4 | 952 | 979 | IPR001736 | GO:0003824(InterPro) | |
Hepe03g0480 | 1106 | MobiDBLite | consensus disorder prediction | 1 | 94 | - | - | |
Hepe03g0480 | 1106 | Gene3D | Endonuclease Chain A | 764 | 1000 | - | - | |
Hepe03g0480 | 1106 | PANTHER | PHOSPHOLIPASE D | 292 | 1094 | IPR015679 | GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g1369 | Hepe-Chr2:17394801 | Hepe03g0480 | Hepe-Chr3:7422899 | 1.78e-237 | dispersed | |
Hepe03g0480 | Hepe-Chr3:7422899 | Hepe06g1205 | Hepe-Chr6:61581699 | 0.0 | dispersed | |
Hepe03g0480 | Hepe-Chr3:7422899 | Hepe03g1618 | Hepe-Chr3:73083410 | 1.18e-240 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe03g0480 | K01115 | - | csv:101218942 | 1952.18 |