Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0481 ATGTCCGATCTTCAGAAACAAGAACTCGACGACGACGACGACTCTCCGGCCACCGATCTCCGTATCAACGACTCCTCTCGAATGGACCTTCTTGCCCTTGCTCCCAAGCAGGAGCATCCCGACTCCGACGACGACTCCAGCCTCCCTCGGGTCGTCAAGTTCACGCCGGAGATTTCTAAAACGGTCTCGGCTCTCCCGCCGAAGAGAGCCTCGACGAAGGATCGCCACACCAAGGTCGAGGGCCGCGGCCGGAGGATTCGGATTCCGGCCACCTGTGCGGCGCGTATATTCCAGTTGACTCGAGAGCTCGGCCACAAGTCCGACGGCGAAACCATCCGGTGGCTACTCGAAAGAGCCGAGCCGGCGATCATCGCCGCTACTGGGACTGGTACCATTCCCGCCATTGCCATGTCCGTTAACGGCACTCTCAAGATTCCCACCACCACTTCTTCTTCTAACCAAGATTCCACCGACCAATCCATCGGTAAGAAGCGGCGTAAACGCCCTGCGAACAGTGATTACGTCGACGTAAACGACGCCGTTTCCGTTTCCGTTTCGAACGGAGTCGTTCAGGCCAGTTCCGCCGCCGTGCAACACGCTTTTCCGCCGGGGTTCCTTCCAGTGTGGGCCATCCCATCGAACGCCATAATTCCCGGGGCGGTTTTCATGGTTCCATCCATGGCATGCTCTTCAACCCATCCCCAGTTGTTCTCATTTCAGGCTCCGGTGGCGGCGCCGCTCATTAATACGACGGCACGACCCATTTCCGCCGTCCCGTCGAAGCCAGACACGTCTCACATTCAATCCAGCCCCACCAATCAAAGCTCGAGCACTTCTTGCTCTTCCGCTTCCAAGTCTCAATCCGTCATGGCGCCGATCTCAAGCTCCACCGTCCCGACGACTGGAAAAACGACACAGATGCTTAGAGATTTCTCGTTGGAGATATACGATAAGGAAGAGCTTCAGTTCATGTCTCGCTCCTCCTCAAAACATTAA 996 56.83 MSDLQKQELDDDDDSPATDLRINDSSRMDLLALAPKQEHPDSDDDSSLPRVVKFTPEISKTVSALPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSTDQSIGKKRRKRPANSDYVDVNDAVSVSVSNGVVQASSAAVQHAFPPGFLPVWAIPSNAIIPGAVFMVPSMACSSTHPQLFSFQAPVAAPLINTTARPISAVPSKPDTSHIQSSPTNQSSSTSCSSASKSQSVMAPISSSTVPTTGKTTQMLRDFSLEIYDKEELQFMSRSSSKH 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7455202 7457159 - Hsped.03g04810.1 Hepe03g0481 565479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0481 331 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 53 281 IPR005333 GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)
Hepe03g0481 331 MobiDBLite consensus disorder prediction 145 173 - -
Hepe03g0481 331 Pfam TCP family transcription factor 71 169 IPR017887 -
Hepe03g0481 331 MobiDBLite consensus disorder prediction 1 17 - -
Hepe03g0481 331 MobiDBLite consensus disorder prediction 1 49 - -
Hepe03g0481 331 MobiDBLite consensus disorder prediction 63 82 - -
Hepe03g0481 331 MobiDBLite consensus disorder prediction 34 49 - -
Hepe03g0481 331 MobiDBLite consensus disorder prediction 159 173 - -
Hepe03g0481 331 MobiDBLite consensus disorder prediction 254 304 - -
Hepe03g0481 331 ProSiteProfiles TCP domain profile. 72 126 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0481 Hepe-Chr3:7455202 Hepe09g0125 Hepe-Chr9:998999 1.14e-34 dispersed
Hepe03g0481 Hepe-Chr3:7455202 Hepe07g0200 Hepe-Chr7:1767012 9.68e-55 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55229 PF03634 TCP 4.20E-30 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0481 - - - 0.0