Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0537 ATGGAGGGACTTGTGCGACGACTCGTGGTGCTTAAGATAGCCATATTAGCCGTGGTCGCGGCGGTGGCGGTGGCGGTCCCGACGACGGTAGCTTCTCAAGCGAAACCCGGGTGCGAGGATAAGTGTAACAACTTAATTGTTCCATATCCATTTGGGATGAGCAAAGAGTGTTATCTGGATGAAAAATTCTTCATTAAGTGTAACAAAACTTATGATCCTCCAAAGGCATTCCTAATGGACAGCACCATTGAAGTAACTAATATATCCCTCCAAGGCGAGCTCCACATCTTGCAGTTCATTGCAAGAGATTGTTACACTGAAAATGGTCCTGAATTCTCCAACAGACCTACTCTCACCGTCCCCATGTTCACAATTTCGAACACGAAGAACAAGTTCACCGTCATCGGCTGCGATACGTACGCTTATCTTTACGGCAAACTCGAGGGGGAATACTACACAAGTGGCTGCATGGCCTTGTGTGGAAACAGTACTAGAACTATCAAAGATGGGTCCTGCTCTGGGAATGGTTGCTGTCAGTTGGAGATTCCTAAAGGCTTAAAAGATTTGGAGTTGGAGGTGAGAAGCTTCAATAATCACTCTAAGGTACTCCACTTCAATCCTTGTGGGTATGCTTTTGTAATCCAACAAGACAACTTCAACTTCTCCTCCAAATATATTAGCAATTTTTCACCAGACAAAGTTCCATTGGTGCTTGATTGGGGCATCAATAATCTTACTTGCTTAACAGCTAACGACACAGACAATAATTGTCTATGTGGACCATACAGCAAAAGGAATAATAGCTTATCCATTGATGAATCTGAATATGATTGCCAATGCTTGGATGGTTTCGATGGGAATCCATATCTCGGTTGTCAAAATATAAATGAATGCGAGAGAAAGCTTCATGATTGTCTTAGTATAAACCACTGTAACGACACAAATGGAAGCTATAATTGCTACTGTCCTGACGGTTTCGGAGATGGAAAACTTAACGGAACTCGTTGCACCTCAAACTCTATGTCTCCCATTCGAATCATCGTCGGGATTGGTGTGGGATTCACAGTTTTGTTAATTGGAAGTACATGGATGTACTTAGTTTACAGAAGGTGGAAGTTCATTCAAAGAAAAGAGAAGTTTTTCAAGAATAATGGAGGCTTCCTTCTTCAACAACATCTTTCTCAAGGGCAGTCACCTACCGACGAGGGAGTCAGAATTTTCACCCAAGAAGAGCTGGAGAAGGCTACAAACAAGTTCGACGAAAGCGCAGTGGTCGGAAAAGGTGGCTACGGCACCGTTTACAAAGGAGTGTTCGGGAGCGGTTTGGTAGTTGCAATTAAGAAATCAAAATTAGTAGACCAATCTCAAACCTCCCAATTCATTAACGAAGTGATTGTTTTGTCCCAAATCAACCATCGCAACGTGGTGAAGCTGTTGGGGTGTTGTTTGGAGACGGAAGTCCCATTGCTCGTCTACGAGTTCATCAGCAACGGCACACTTTTCGACCACATCCATGACAAAACCAAGCATGTTTCACTTTCATGGGAAGTTCGTTTGAAAATAGCTTCTGAAACAGCAGGTGTCCTGTCCTATTTGCATTCTTCAGCTTATACTCCTATCATCCACAGAGATATCAAGCCCACTAATATACTTTTAGACCATAATCACACTGCCAAAGTCTCTGATTTCGGTGCTTCAAAGTTGGTTCCATTGGATCAAACTGAGCTATCCACGATGGTGCAAGGGACTCTTGGATATTTGGACCCTGAATACTTGTTAACAAGCGAGTTGACGGAGAAAAGCGATGTGTATAGCTTCGGAATTGTGCTTATGGAGCTTATAACTGGGAAGAAGGCTGTACGTTTTGATGGTCCAGAAGTAGAGAGAAATCTAGCCATGTACTTCTTGTGTGCAATGAAAGAAGATCGTTTCGAAGAAGTTATCGAGGAAGGAATGGCGACGAGAGGGAACTTTGAGAAGATAAAACAAGTGGCAAAGCTAGCAAAAGAGTGTGTGAGAGTAAAAGGGGAGGAGCGACCCACCATGAAGGAGGTAGCTATGGAGTTTGAGGGACTTAGACAGATGCAAATTCAGCATTCATGGGCTGCCAATAACAATTCATCCAACGTAGAAGAGATGGCATATTTGCTGGATGGAGCTTCAAACTCGAGCTCGTTTGTTGTCAATGACAGTTTGGATTATAGCATAAAGGCTCAAATTTTGTCACGTATCCCTGATGGAAGATGA 2247 43.17 MEGLVRRLVVLKIAILAVVAAVAVAVPTTVASQAKPGCEDKCNNLIVPYPFGMSKECYLDEKFFIKCNKTYDPPKAFLMDSTIEVTNISLQGELHILQFIARDCYTENGPEFSNRPTLTVPMFTISNTKNKFTVIGCDTYAYLYGKLEGEYYTSGCMALCGNSTRTIKDGSCSGNGCCQLEIPKGLKDLELEVRSFNNHSKVLHFNPCGYAFVIQQDNFNFSSKYISNFSPDKVPLVLDWGINNLTCLTANDTDNNCLCGPYSKRNNSLSIDESEYDCQCLDGFDGNPYLGCQNINECERKLHDCLSINHCNDTNGSYNCYCPDGFGDGKLNGTRCTSNSMSPIRIIVGIGVGFTVLLIGSTWMYLVYRRWKFIQRKEKFFKNNGGFLLQQHLSQGQSPTDEGVRIFTQEELEKATNKFDESAVVGKGGYGTVYKGVFGSGLVVAIKKSKLVDQSQTSQFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFISNGTLFDHIHDKTKHVSLSWEVRLKIASETAGVLSYLHSSAYTPIIHRDIKPTNILLDHNHTAKVSDFGASKLVPLDQTELSTMVQGTLGYLDPEYLLTSELTEKSDVYSFGIVLMELITGKKAVRFDGPEVERNLAMYFLCAMKEDRFEEVIEEGMATRGNFEKIKQVAKLAKECVRVKGEERPTMKEVAMEFEGLRQMQIQHSWAANNNSSNVEEMAYLLDGASNSSSFVVNDSLDYSIKAQILSRIPDGR 748
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10085753 10088648 - Hsped.03g05370.1 Hepe03g0537 565535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0537 748 Gene3D Phosphorylase Kinase; domain 1 390 494 - -
Hepe03g0537 748 Pfam Wall-associated receptor kinase galacturonan-binding 38 92 IPR025287 GO:0030247(InterPro)
Hepe03g0537 748 FunFam Wall-associated receptor kinase 2 388 494 - -
Hepe03g0537 748 SMART egfca_6 294 337 IPR001881 GO:0005509(InterPro)
Hepe03g0537 748 Pfam Protein kinase domain 421 685 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0537 748 ProSitePatterns Protein kinases ATP-binding region signature. 425 448 IPR017441 GO:0005524(InterPro)
Hepe03g0537 748 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 311 322 IPR000152 -
Hepe03g0537 748 CDD STKc_IRAK 425 692 - -
Hepe03g0537 748 FunFam Wall-associated receptor kinase 2 495 713 - -
Hepe03g0537 748 ProSiteProfiles Protein kinase domain profile. 419 702 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0537 748 SUPERFAMILY Protein kinase-like (PK-like) 401 687 IPR011009 -
Hepe03g0537 748 Gene3D Plasmodium vivax P25 domain 238 342 - -
Hepe03g0537 748 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 34 701 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(InterPro)|GO:0007166(PANTHER)
Hepe03g0537 748 SMART serkin_6 419 690 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g0537 748 Gene3D Transferase(Phosphotransferase) domain 1 495 715 - -
Hepe03g0537 748 CDD EGF_CA 294 326 - -
Hepe03g0537 748 ProSiteProfiles EGF-like domain profile. 294 337 IPR000742 -
Hepe03g0537 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 540 552 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g0537 748 ProSitePatterns Calcium-binding EGF-like domain signature. 294 320 IPR018097 GO:0005509(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2739 Hepe-Chr2:75889217 Hepe03g0537 Hepe-Chr3:10085753 0.0 dispersed
Hepe02g2740 Hepe-Chr2:75906938 Hepe03g0537 Hepe-Chr3:10085753 8.46e-136 dispersed
Hepe03g0537 Hepe-Chr3:10085753 Hepe10g1945 Hepe-Chr10:56330880 6.52e-223 dispersed
Hepe03g0537 Hepe-Chr3:10085753 Hepe02g2738 Hepe-Chr2:75877020 0.0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72646 PF00069 Pkinase 4.40E-48 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0537 - - - 0.0