Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe03g0561 | ATGGATGTCGGATTGGCGTTAGTTATAGTAACGGCAGTAACGGCGTATCTGCTATGGTTCACTTTCATTTCACGGTCGTTAAAAGGTCCTCAAATGTGGCCGTTACTCGGCAGCCTCCCGGGACTGATCGAGAATTGCGACCGTTTACACGACTGGATCTCCGACAACCTCCGCGCGTGTGGCGGCACGTACCAAACCTGCATCTGGGCCTTCCCTTTCTTCGCTAAAAAACAAGGCCTCGTGACTGTCACGTGCGACCCGAGAAATCTGGAGCACATTCTCAAGACCCGTTTCGACAACTACCCCAAGGGCCCCACTTGGCAAGCCGTTTTCCATGAGCTTCTCGGCCAGGGTATTTTCAACTCCGACGGTGACACGTGGCTCTTCCAGAGAAAAACCGCCGCCTTGGAATTTACCACTCGTACCCTCCGCCAAGCCATGGCTCGCTGGGTCAGCCGCGCTATTAAGCTCAGGTTTTGCCCTATTTTGAAACAAGCCGAGCTCAATTCCGACCCTATTGATCTTCAAGATGTGTTGTTACGTCTCACTTTTGATAACATTTGCGGCTTGGCTTTCGGGAAAGACCCGATGACTTGCGCGTCGGGTTTCCCCGAAAACGAGTTCGCAACGGCTTTCGACCGAGCCACCGAAGCCTCCTTGCAGCGGTTTATTCTCCCGGAAGTCCTTTGGAAATTCAAGAAATGGCTTCGGCTTGGAATGGAAGTCAGCTTGAGCCGTAGCCTCGTCCATATTGAGGAGTATTTATCCAGTGTGATCGACTCACGTAAGCTCGAGCTGCTGAATCACCCTAAAGACTCGACCCCACACGACGATTTACTCTCGCGATTCATGAAGAAGAAGGAAGGAAATTACTCCAACTCATTCCTCCGCCACGTGGCACTTAATTTCATCCTAGCTGGACGTGACACGTCATCTGTCGCCTTGAGCTGGTTTTTCTGGTTGGTCACATTGAACCCACTCGTAGAGGAAAAAATCCTCCGCGAGATCTGTACCGTTCTGATTGAGACACGTGGCAATCAATCGTGGCTGGATGAACCGTTGGAATTCGAAGAGATCGACCGTCTGATTTATCTCAAAGCCGCTCTTACCGAAACGCTAAGGCTGTACCCGTCGGTGCCGGAGGATTCAAAGCACGTCGTCGCCGACGACGTCCTGCCGGACGGAACCTTCGTTCCGGCGGGATCGTCGGTGACTTACTCAATCTACTCCACCGGAAGAATGAAGTCGATCTGGGGAGAGGACTGCCTCGAATTCCGGCCGGAGCGGTGGCTGACGGCGGACGGTCAGAAATTCATACCGTACGATTCGTACAAATTCGTAGCGTTCAATGCAGGGCCGAGGATCTGTTTGGGGAAGGATTTGGCGTATTTACAGATGAAATCGATCGCGGCGGCGGTGTTACTCCGGCACCGGCTGACGGTGGCGCCGGGGCATAAAGTGGAGCAGAAAATGTCGTTAACGCTATTCATGAAGTACGGGCTGAAGGTGAACGTTCACCGGAGGGACTTATCGGGAATTCTCGAAAGCATCAGGGGCAAAAACGGAATTTCGCAAGGGAAAGAAGGTCCGTTAGTCGCCGTTGTGAACTGTAACGGTGGGTGTAACGGAGTTAAGGAAGTATAA | 1644 | 52.43 | MDVGLALVIVTAVTAYLLWFTFISRSLKGPQMWPLLGSLPGLIENCDRLHDWISDNLRACGGTYQTCIWAFPFFAKKQGLVTVTCDPRNLEHILKTRFDNYPKGPTWQAVFHELLGQGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKLRFCPILKQAELNSDPIDLQDVLLRLTFDNICGLAFGKDPMTCASGFPENEFATAFDRATEASLQRFILPEVLWKFKKWLRLGMEVSLSRSLVHIEEYLSSVIDSRKLELLNHPKDSTPHDDLLSRFMKKKEGNYSNSFLRHVALNFILAGRDTSSVALSWFFWLVTLNPLVEEKILREICTVLIETRGNQSWLDEPLEFEEIDRLIYLKAALTETLRLYPSVPEDSKHVVADDVLPDGTFVPAGSSVTYSIYSTGRMKSIWGEDCLEFRPERWLTADGQKFIPYDSYKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVAPGHKVEQKMSLTLFMKYGLKVNVHRRDLSGILESIRGKNGISQGKEGPLVAVVNCNGGCNGVKEV | 547 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 10977193 | 10979437 | - | Hsped.03g05610.1 | Hepe03g0561 | 565559 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe03g0561 | 547 | PRINTS | E-class P450 group I signature | 456 | 479 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe03g0561 | 547 | PRINTS | E-class P450 group I signature | 295 | 312 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe03g0561 | 547 | PRINTS | E-class P450 group I signature | 315 | 341 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe03g0561 | 547 | PRINTS | E-class P450 group I signature | 446 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe03g0561 | 547 | PRINTS | E-class P450 group I signature | 366 | 384 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe03g0561 | 547 | SUPERFAMILY | Cytochrome P450 | 21 | 508 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe03g0561 | 547 | FunFam | Cytochrome P450 | 21 | 511 | - | - | |
| Hepe03g0561 | 547 | PANTHER | CYTOCHROME P450 | 18 | 501 | - | - | |
| Hepe03g0561 | 547 | Gene3D | Cytochrome P450 | 24 | 510 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe03g0561 | 547 | CDD | CYP86A | 67 | 501 | - | - | |
| Hepe03g0561 | 547 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 449 | 458 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Hepe03g0561 | 547 | PRINTS | P450 superfamily signature | 456 | 467 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe03g0561 | 547 | PRINTS | P450 superfamily signature | 367 | 378 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe03g0561 | 547 | PRINTS | P450 superfamily signature | 306 | 323 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe03g0561 | 547 | PRINTS | P450 superfamily signature | 447 | 456 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe03g0561 | 547 | Pfam | Cytochrome P450 | 28 | 495 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe03g0561 | Hepe-Chr3:10977193 | Hepe10g1310 | Hepe-Chr10:48957050 | 3.55e-237 | dispersed | |
| Hepe01g0172 | Hepe-Chr1:29194504 | Hepe03g0561 | Hepe-Chr3:10977193 | 4.58e-14 | wgd | |
| Hepe03g0561 | Hepe-Chr3:10977193 | Hepe06g1535 | Hepe-Chr6:66054091 | 2.57e-291 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe03g0561 | K15398 | - | csv:101221526 | 1056.2 |