Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0743 ATGGAATTTCTCACAAAAGTGAAAGGTTACTCCGAAAAATTAGAAGAAGAAGACGAGGAGGAAGAAGAATTAGAAGAAATCCGGAGTGTTGTTGCATGTGATTTCTTCCCAAGTTCTCACTCCCAAAACCACCAATGGCTGGAACCGGGTTCGAATCAGTCTCAAAATCACTTCGAAAACCATCAGCAACCGCCTCTGATGGATTTATCGCTACGAATCGACACGAGCATCAACATTGACAAGAACAATAAGAGTGGATTTGTGGTTGAGAGAGAGCACATGTTCGACAAAGTGGTGACTCCAAGCGATGTGGGGAAATTAAACCGTCTAGTGATCCCAAAGCAACACGCTGAAAAATACTTCCCTTTGGACTCAACAACCAACGACAAGGGCCTCATCCTCAACTTCGAGGACCGTAATGGAAAGCCCTGGCGCTTCCGTTACTCCTACTGGAACAGCAGCCAGAGCTACGTAATGACCAAAGGTTGGAGCCGTTTTGTCAAAGACAAGAAACTCGATGCAGGCGACGTCGTTTCCTTCCACCGCGCCGTCGCCGCCAAGGACCGTCTCTTCATCGACTGGCGCCGCCGTCCCGACGCCCCTCGCCCTCTCCACCATCACCACTTCTCCAACCCTCTACTCCTCCTCCCGCAGTCCCTCCGCTGGCCTTCCGCCCGCCACTTCACTCTCCCAACCCCACCTCCACCACCGCCACCCCACCACCACCACCACCATCTCACTAATTACTCCAATCTCTATCCCAATTTAGGGATGGGGAGCAATGCTAATAATACTAATACTACTACTACTACTTCTAATTCCATGTATTATTTTCGACCCTCGATTTCGACTTCGTCGTCGTCCGCTCTCTATAGGATGGGGAATGGGGATGAGATTGTTGTTAATACTGAAGGTTCTTCAATGATGGGGATTAACAAAGCCAGCTCCGGAGGTGCTACGGTGACGGCCACGGCCACGGCAGCGAAACGACTCCGGCTGTTTGGAGTGAATATGGAGTATTCTGCTGCAGCGGACGAAGGAGGACGAGGAGGACGAGAAGAGGATCTGTCAAACGGCGGGGTTTCGAGGAGAGGGAAAGAACCCTTGTCGTTGAATTGGGATTTTCTTTAA 1131 50.49 MEFLTKVKGYSEKLEEEDEEEEELEEIRSVVACDFFPSSHSQNHQWLEPGSNQSQNHFENHQQPPLMDLSLRIDTSINIDKNNKSGFVVEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSTTNDKGLILNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRAVAAKDRLFIDWRRRPDAPRPLHHHHFSNPLLLLPQSLRWPSARHFTLPTPPPPPPPHHHHHHLTNYSNLYPNLGMGSNANNTNTTTTTSNSMYYFRPSISTSSSSALYRMGNGDEIVVNTEGSSMMGINKASSGGATVTATATAAKRLRLFGVNMEYSAAADEGGRGGREEDLSNGGVSRRGKEPLSLNWDFL 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 19841950 19843080 + Hsped.03g07430.1 Hepe03g0743 565741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0743 376 Gene3D - 88 210 IPR015300 -
Hepe03g0743 376 MobiDBLite consensus disorder prediction 1 21 - -
Hepe03g0743 376 FunFam B3 domain-containing protein 88 208 - -
Hepe03g0743 376 SMART B3_2 95 198 IPR003340 GO:0003677(InterPro)
Hepe03g0743 376 CDD B3_DNA 93 182 IPR003340 GO:0003677(InterPro)
Hepe03g0743 376 Coils Coil 7 30 - -
Hepe03g0743 376 Pfam B3 DNA binding domain 95 197 IPR003340 GO:0003677(InterPro)
Hepe03g0743 376 SUPERFAMILY DNA-binding pseudobarrel domain 92 199 IPR015300 -
Hepe03g0743 376 MobiDBLite consensus disorder prediction 42 61 - -
Hepe03g0743 376 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 42 338 IPR044800 GO:0003700(InterPro)
Hepe03g0743 376 MobiDBLite consensus disorder prediction 343 366 - -
Hepe03g0743 376 MobiDBLite consensus disorder prediction 346 361 - -
Hepe03g0743 376 ProSiteProfiles B3 DNA-binding domain profile. 95 198 IPR003340 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2727 Hepe-Chr2:75605957 Hepe03g0743 Hepe-Chr3:19841950 2.42e-43 dispersed
Hepe03g0743 Hepe-Chr3:19841950 Hepe06g1411 Hepe-Chr6:64472738 2.24e-66 dispersed
Hepe03g0743 Hepe-Chr3:19841950 Hepe01g1220 Hepe-Chr1:77380913 1.39e-46 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55250 PF02362 B3 9.10E-29 CL0405 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0743 K09287 - csv:101221141 384.415