Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe03g0743 | ATGGAATTTCTCACAAAAGTGAAAGGTTACTCCGAAAAATTAGAAGAAGAAGACGAGGAGGAAGAAGAATTAGAAGAAATCCGGAGTGTTGTTGCATGTGATTTCTTCCCAAGTTCTCACTCCCAAAACCACCAATGGCTGGAACCGGGTTCGAATCAGTCTCAAAATCACTTCGAAAACCATCAGCAACCGCCTCTGATGGATTTATCGCTACGAATCGACACGAGCATCAACATTGACAAGAACAATAAGAGTGGATTTGTGGTTGAGAGAGAGCACATGTTCGACAAAGTGGTGACTCCAAGCGATGTGGGGAAATTAAACCGTCTAGTGATCCCAAAGCAACACGCTGAAAAATACTTCCCTTTGGACTCAACAACCAACGACAAGGGCCTCATCCTCAACTTCGAGGACCGTAATGGAAAGCCCTGGCGCTTCCGTTACTCCTACTGGAACAGCAGCCAGAGCTACGTAATGACCAAAGGTTGGAGCCGTTTTGTCAAAGACAAGAAACTCGATGCAGGCGACGTCGTTTCCTTCCACCGCGCCGTCGCCGCCAAGGACCGTCTCTTCATCGACTGGCGCCGCCGTCCCGACGCCCCTCGCCCTCTCCACCATCACCACTTCTCCAACCCTCTACTCCTCCTCCCGCAGTCCCTCCGCTGGCCTTCCGCCCGCCACTTCACTCTCCCAACCCCACCTCCACCACCGCCACCCCACCACCACCACCACCATCTCACTAATTACTCCAATCTCTATCCCAATTTAGGGATGGGGAGCAATGCTAATAATACTAATACTACTACTACTACTTCTAATTCCATGTATTATTTTCGACCCTCGATTTCGACTTCGTCGTCGTCCGCTCTCTATAGGATGGGGAATGGGGATGAGATTGTTGTTAATACTGAAGGTTCTTCAATGATGGGGATTAACAAAGCCAGCTCCGGAGGTGCTACGGTGACGGCCACGGCCACGGCAGCGAAACGACTCCGGCTGTTTGGAGTGAATATGGAGTATTCTGCTGCAGCGGACGAAGGAGGACGAGGAGGACGAGAAGAGGATCTGTCAAACGGCGGGGTTTCGAGGAGAGGGAAAGAACCCTTGTCGTTGAATTGGGATTTTCTTTAA | 1131 | 50.49 | MEFLTKVKGYSEKLEEEDEEEEELEEIRSVVACDFFPSSHSQNHQWLEPGSNQSQNHFENHQQPPLMDLSLRIDTSINIDKNNKSGFVVEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSTTNDKGLILNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRAVAAKDRLFIDWRRRPDAPRPLHHHHFSNPLLLLPQSLRWPSARHFTLPTPPPPPPPHHHHHHLTNYSNLYPNLGMGSNANNTNTTTTTSNSMYYFRPSISTSSSSALYRMGNGDEIVVNTEGSSMMGINKASSGGATVTATATAAKRLRLFGVNMEYSAAADEGGRGGREEDLSNGGVSRRGKEPLSLNWDFL | 376 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 19841950 | 19843080 | + | Hsped.03g07430.1 | Hepe03g0743 | 565741 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe03g0743 | 376 | Gene3D | - | 88 | 210 | IPR015300 | - | |
Hepe03g0743 | 376 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Hepe03g0743 | 376 | FunFam | B3 domain-containing protein | 88 | 208 | - | - | |
Hepe03g0743 | 376 | SMART | B3_2 | 95 | 198 | IPR003340 | GO:0003677(InterPro) | |
Hepe03g0743 | 376 | CDD | B3_DNA | 93 | 182 | IPR003340 | GO:0003677(InterPro) | |
Hepe03g0743 | 376 | Coils | Coil | 7 | 30 | - | - | |
Hepe03g0743 | 376 | Pfam | B3 DNA binding domain | 95 | 197 | IPR003340 | GO:0003677(InterPro) | |
Hepe03g0743 | 376 | SUPERFAMILY | DNA-binding pseudobarrel domain | 92 | 199 | IPR015300 | - | |
Hepe03g0743 | 376 | MobiDBLite | consensus disorder prediction | 42 | 61 | - | - | |
Hepe03g0743 | 376 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 42 | 338 | IPR044800 | GO:0003700(InterPro) | |
Hepe03g0743 | 376 | MobiDBLite | consensus disorder prediction | 343 | 366 | - | - | |
Hepe03g0743 | 376 | MobiDBLite | consensus disorder prediction | 346 | 361 | - | - | |
Hepe03g0743 | 376 | ProSiteProfiles | B3 DNA-binding domain profile. | 95 | 198 | IPR003340 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g2727 | Hepe-Chr2:75605957 | Hepe03g0743 | Hepe-Chr3:19841950 | 2.42e-43 | dispersed | |
Hepe03g0743 | Hepe-Chr3:19841950 | Hepe06g1411 | Hepe-Chr6:64472738 | 2.24e-66 | dispersed | |
Hepe03g0743 | Hepe-Chr3:19841950 | Hepe01g1220 | Hepe-Chr1:77380913 | 1.39e-46 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55250 | PF02362 | B3 | 9.10E-29 | CL0405 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe03g0743 | K09287 | - | csv:101221141 | 384.415 |