Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g0790 ATGTCGTTGAGCACTGAAATTGAAAGTCTTTGGGTCTTCGCTTTGGCTTCTAAATTCTCTTCTCTCACTACACAAACCATCCTTTGCTCCCTACTCTTCCTTTTCTTGGCTTGGTTTCTTCTTTCCATTTTCTATTGGTCCCATCCCGGCGGCCCTGCTTGGGGCTGCCACCGATGGTCCTCCGCCCCCGCCCCCGCCATCCCTGGTCCTAGAGGCCTCCCCTTCGTCGGGAGCATGACTCTGATGTCCGGCTTGGCCCACCAACGAATCGCCACCATCGCCAAATCCCTACGCGCCACTCGCCTCATGGCCTTCTCACTCGCTAACACTCGCGTCATTGTCACTTGCAACCCGGATGTTGCCAAACAGATCCTCAACAGCTCTGTTTTTGCTGACCGTCCGATCAAGGAATCTGCTTACTCCTTGATGTTCAATCGCGCCATTGGATTTGCCCCTTATGGTTTCTATTGGCGGACTCTTCGACGTATCGCTTCACAACATCTCTTTTCCCCTAAACAAATATTATCCTCACAGTCCCAACGCTGCCAAATCGCTTCACAAATGGTAACAATTTTCTCTAATACCATGTCGTCTCACTGCGTTCGTGACACTCTCAAAACTGCCTCTTTGAACCACATGATGGGCTCGGTCTTCGGTCGGTTCTACAACCTCTCTGACTCTAATTTCGAAGTCCAACAACTCAAGGACCTCGTCGACGAAGCCTACGATTTATTGGGCCTTCTCAACTGGTCCGATCATCTCCCCTTTTTGGCTGATTTTGACCCACAAAGAATCCGGTTTAGATGCTTTCAGTTGGTCCCCAAAGTGAACCGCTTCGTCGCTCGGATCATCGCCGACCACCGCTCCAAATCAACCCAACAAAACATGGATTTCGTTGATGTTCTTCTCTCTCTTCAAGAAACCGATAAACTCTCTGATTCTGATATGATCGCCGTTCTTTGGGAAATGATTTTTAGAGGGACGGACACGGTGGCAGTTTTGATAGAGTGGATTCTAGCGAGGATGGTGGTACATAAAGACGAGCAAGAAAAGGTACAAGAGGAACTAGATACGGTGGTTGGAACATCACGTGCCGTCAAGGAATCCGACATTCCGTCGTTGGTTTATTTAACAGCAGTGGTTAAGGAAGTACTCAGGTTGCACCCTCCGGGCCCACTTCTGTCGTGGGCTCGCCTGGCCATCACCGATACTATCGTGGATGGTCATCACGTGCCGAAAGGGACCACTGCTATGGTAAACATGTGGTCGATAGCGCGGGACCCACAGGTCTGGTCGGACCCACTTGAATTTATGCCCCAAAGGTTTGTGTCCGGTTCTAGTGCTGATGTTGACGTGGAGTTTTCAGTGATGGGTTCGGATCTCAGGCTAGCTCCGTTCGGGTCGGGTCGTAGGACTTGCCCCGGAAAGGCACTTGCTTGGACAACTGTCACTTTTTGGGTGGCTACGCTTTTACACGAGTTTAAATGGTTGCCTTCGTCAGATCAAAACGACGCCATCGACTTCTCAGAGAATTTTGGACTCTCCCCTTTTCGCCGTGCTCCGCCGCGCGATGGTGTCTGCCGGGCGCGCCTGGAACCTGTACACGGAGGGGAAAATAGACTTGCACCGGTGGGCTTGGCCCACGGGCATTCGATGCTTAAGTCAGAGAGATCCGAGCATAAGGTATTTATAGCTGGTCGTGAGAAATGGCTCCTCGAGTGGCCCAGTCCCTTGGCCTTCGGACGAACACATGACCGGGGCGAGGGGGCGTGGACCAACCGGGGTTGGGTCAACGCGCTTCGTTATGATTGCGGCAACTGTCGTTCCCCGATTCCCGAGAGGGTTGGGGGCGCCTGTTGTGCCGCCTCTTCGTCAGTCGTGGCAGGTTCTCTTGTCAATCACATCTCGTACCACTCGAGGACTGGCGTGATGACAGCTTGCCTTCGTCAGCTTTGGGGAGCTTCATTCGCCGAAGCTTCGTGGTCGACCCCTGGGGATGGTTCGTCTGAGGCTTAG 2016 52.63 MSLSTEIESLWVFALASKFSSLTTQTILCSLLFLFLAWFLLSIFYWSHPGGPAWGCHRWSSAPAPAIPGPRGLPFVGSMTLMSGLAHQRIATIAKSLRATRLMAFSLANTRVIVTCNPDVAKQILNSSVFADRPIKESAYSLMFNRAIGFAPYGFYWRTLRRIASQHLFSPKQILSSQSQRCQIASQMVTIFSNTMSSHCVRDTLKTASLNHMMGSVFGRFYNLSDSNFEVQQLKDLVDEAYDLLGLLNWSDHLPFLADFDPQRIRFRCFQLVPKVNRFVARIIADHRSKSTQQNMDFVDVLLSLQETDKLSDSDMIAVLWEMIFRGTDTVAVLIEWILARMVVHKDEQEKVQEELDTVVGTSRAVKESDIPSLVYLTAVVKEVLRLHPPGPLLSWARLAITDTIVDGHHVPKGTTAMVNMWSIARDPQVWSDPLEFMPQRFVSGSSADVDVEFSVMGSDLRLAPFGSGRRTCPGKALAWTTVTFWVATLLHEFKWLPSSDQNDAIDFSENFGLSPFRRAPPRDGVCRARLEPVHGGENRLAPVGLAHGHSMLKSERSEHKVFIAGREKWLLEWPSPLAFGRTHDRGEGAWTNRGWVNALRYDCGNCRSPIPERVGGACCAASSSVVAGSLVNHISYHSRTGVMTACLRQLWGASFAEASWSTPGDGSSEA 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 24342393 24349241 - Hsped.03g07900.1 Hepe03g0790 565788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g0790 671 Gene3D Cytochrome P450 56 520 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g0790 671 PANTHER CYTOCHROME P450 78A7-RELATED 4 516 IPR051996 -
Hepe03g0790 671 Pfam Cytochrome P450 68 507 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g0790 671 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Hepe03g0790 671 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g0790 671 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g0790 671 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g0790 671 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g0790 671 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g0790 671 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g0790 671 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g0790 671 SUPERFAMILY Cytochrome P450 67 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g0790 671 CDD CYP78 98 515 - -
Hepe03g0790 671 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g0790 671 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g0790 671 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g0790 671 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g0790 671 FunFam Cytochrome P450 78A5 59 523 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0790 Hepe-Chr3:24342393 Hepe10g0570 Hepe-Chr10:6826811 3.49e-164 dispersed
Hepe03g0790 Hepe-Chr3:24342393 Hepe05g0664 Hepe-Chr5:10985117 1.59e-67 wgd
Hepe03g0790 Hepe-Chr3:24342393 Hepe06g0751 Hepe-Chr6:53886409 5.40e-40 wgd
Hepe03g0790 Hepe-Chr3:24342393 HepeContig66g0190 Hepe-ChrContig66:16312118 8.00e-06 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g0790 K20619 - csv:101216159 809.675