Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1083 ATGAGCATTAGTATTGTGAGAGGTGAAAATACATTGCAGGCGCCTGTGAAGCTAATATGGCATTACTACAAGCTCAACACAACTTGTCCTGATGCTGAAACATTCATAAAACATCAAGTCAAGTTGTTTTGGGATAAGGATAAAAGCATCACTGCCAAATTCCTCCGTTTGCTCTCTGCAGATTGCCTTTCCAAAAATGGTTGTGATGCTTCCATACTTCTTGATGGTCTAAACTCCGAGAAAAATGCATCACAAAACCAAGGCCTTGGTGGGTTTGAAGAAATTGACAAGATCAAAATTGTACTCGAAGACCGTTGCCCCGGCGTTGTTTCTTGTGCTGATATTCTCAACTTAGCCACTAGAGATGCTGCCAATTTGGCAGGTGCACCATCATATCCAGTTTTTGGAGGAAGAAGGGATGGTTTGACATCGAGTGTTGATGCAGTGGATTTTCCATCACCCTCCATATCATGGCAACAAGGGCTTGCATATTTTCAATCTAAAGGTCTTGATGTTTTGGACATGGCAACACTATTAGGTGCACATTCAATGGGAAAAACACACTGTCGCTACATCATGGATAGGCTATACAATTTCAAAGGCACAGGAAAACCAGATCCAACAATGAACAAATCATTCTTAAAAGAGCTTCAAAAGAAGTGCCCAAAGAAATCTAAAACAGACTCAACACTGAATCTAACACCAAAATCTGGAAATGACTATCAACTCACAGGTCTCTACTACTCGGAAATCCTGTCGAAAAAGGCGGTCCTCGGCATCGATCAACAGCTTCTTTTCGGTAACGACACCAAGGAAATCACCCAAGAGTTTGCTCCAAAATCTGGATTTGAAGACTTCCGTAGGTCCTTTGCTCTGTCCATGAGTAGGATGGGAAATATTAAGGTTTTGACTGGAAAAGATGGCGAGATCCGGCGGAATTGTCGACGAAGAAACTAG 957 42.01 MSISIVRGENTLQAPVKLIWHYYKLNTTCPDAETFIKHQVKLFWDKDKSITAKFLRLLSADCLSKNGCDASILLDGLNSEKNASQNQGLGGFEEIDKIKIVLEDRCPGVVSCADILNLATRDAANLAGAPSYPVFGGRRDGLTSSVDAVDFPSPSISWQQGLAYFQSKGLDVLDMATLLGAHSMGKTHCRYIMDRLYNFKGTGKPDPTMNKSFLKELQKKCPKKSKTDSTLNLTPKSGNDYQLTGLYYSEILSKKAVLGIDQQLLFGNDTKEITQEFAPKSGFEDFRRSFALSMSRMGNIKVLTGKDGEIRRNCRRRN 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 61007049 61008972 + Hsped.03g10830.1 Hepe03g1083 566081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1083 318 Gene3D - 22 318 - -
Hepe03g1083 318 PRINTS Haem peroxidase superfamily signature 174 189 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g1083 318 PRINTS Haem peroxidase superfamily signature 110 127 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g1083 318 PRINTS Haem peroxidase superfamily signature 128 140 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g1083 318 FunFam Peroxidase 152 297 - -
Hepe03g1083 318 PANTHER PEROXIDASE 25-RELATED 22 314 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Hepe03g1083 318 Pfam Peroxidase 37 278 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g1083 318 ProSiteProfiles Plant heme peroxidase family profile. 17 318 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g1083 318 SUPERFAMILY Heme-dependent peroxidases 24 318 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g1083 318 CDD secretory_peroxidase 17 316 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe03g1083 318 Gene3D Peroxidase, domain 2 152 297 - -
Hepe03g1083 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 174 184 IPR019793 -
Hepe03g1083 318 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g1083 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g1083 318 PRINTS Plant peroxidase signature 173 185 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g1083 318 PRINTS Plant peroxidase signature 109 119 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g1083 318 PRINTS Plant peroxidase signature 90 103 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g1083 318 PRINTS Plant peroxidase signature 128 143 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe03g1083 318 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1083 Hepe-Chr3:61007049 Hepe07g1315 Hepe-Chr7:42080594 8.96e-70 dispersed
Hepe01g0177 Hepe-Chr1:29437069 Hepe03g1083 Hepe-Chr3:61007049 1.07e-45 wgd
Hepe01g0321 Hepe-Chr1:47579624 Hepe03g1083 Hepe-Chr3:61007049 5.85e-17 wgd
Hepe10g0859 Hepe-Chr10:20071105 Hepe03g1083 Hepe-Chr3:61007049 4.74e-12 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1083 K00430 - csv:101213667 541.962