Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1122 ATGGAACCCTATCGTTCTCAGAGAAAATCTTCCACCTCAACCACAACCACTTCCTCTTCCACTCTTCCCGTCTACCGCTCTGCTCCTTCTCTCGAAGTCAAGCTTGAAGACTTCGAGCTTTATGCCATAGATCGTCTTCGAGTTCTTAAAGCGATTTCTGATGTTTTATCTCGAGGAAAGAAATCTGAAGAAATGGATAAACAGGTTAGAGAATTGTGGAAAACCAATATGAAACATCCACAGGCATCCGAGGTTGTGAACAAGGATATAATATCTCACTTTGTTCTACGCCTTGTATACTGCAGAACGGAGGAATTGAGGAAATGGTTTCTTTCTATGGAAACTATGTTATTCCGATACCGTTTTCTTTCTGAAAGTCCTGAATCTCAGAAGTTGGTCTTTGCGGAGCTTGGCCTCTCATACAAAGCAATCAGTTATGCAGAATTTGAGGCTGTAAAGGACAAATTGGTTCAAGTTGCTCGGTTGATTGGTCAGCCTGTACCAAGTGCTGATGCCATATACTATAAGGTACCATGGGAAGAAGTTCCAGAACTTGTGGCTGGTCGAAGGGTATTTCTCCATAAAGGATATGCATATATTGCTATTTATCAGGTGGTTTCCCTTGTTGCATCGCAATTCCGCAGTTTACTATCAAAGGCCCTAAGTCTGACAAACAGGAAATGGACATCTACAATAAGAGAGCAAGAGAAAGATCGGTTAACCCCTATCGTAGAAGCCCTTTGCACAAGCTACCTGGGTCCTGACTACTCACAGCCAAGAGAGTATGGTGATATATCAATAAAAGACCTTGACCAAATAGCTAAAAGTTCATTTCCTCTTTGCATGCGGCACCTATTTGAAAAGGTGAAAGAAGATCATCATTTGAAGCATGGAGGGAGAATGCAATTAGGTCTCTTTCTTAAGGGTGTTGGTTTGAATCTTGATGATGCTCTTGCTTTCTGGAAAGCCGAGTTCTCTCAGAGAGTTGGTGCTGAGAGGTTTAACAAAGAATATGCATACAGTATCAGGCATAATTATGGACAAGAAGGCAAAAGAGTGGATTATTCACCTTATTCCTGTCAAAAAATCATCTCATCATCACCTGGTGTTGGCGATCATCATGGATGTCCCTATAGACATTTCGGCGAAGACAACTTAAGAGCAGCTCTTGGTAAAATGGGAGTAAATAACCGGACAATGGAGGATGTACTGGACAGAGTGCGAAATAAACATTATCAGTTGGCGTGCACGTTGACATTTGAATCTATCCATGGCTCGTCGTGTGATGCTGGGATTAATCATCCGAATCAGTACGTCATTGATAGTCAAAAGGTCCTTCAATCTAAGAACAATTCAACAGCCTAG 1365 41.76 MEPYRSQRKSSTSTTTTSSSTLPVYRSAPSLEVKLEDFELYAIDRLRVLKAISDVLSRGKKSEEMDKQVRELWKTNMKHPQASEVVNKDIISHFVLRLVYCRTEELRKWFLSMETMLFRYRFLSESPESQKLVFAELGLSYKAISYAEFEAVKDKLVQVARLIGQPVPSADAIYYKVPWEEVPELVAGRRVFLHKGYAYIAIYQVVSLVASQFRSLLSKALSLTNRKWTSTIREQEKDRLTPIVEALCTSYLGPDYSQPREYGDISIKDLDQIAKSSFPLCMRHLFEKVKEDHHLKHGGRMQLGLFLKGVGLNLDDALAFWKAEFSQRVGAERFNKEYAYSIRHNYGQEGKRVDYSPYSCQKIISSSPGVGDHHGCPYRHFGEDNLRAALGKMGVNNRTMEDVLDRVRNKHYQLACTLTFESIHGSSCDAGINHPNQYVIDSQKVLQSKNNSTA 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 64282389 64297709 - Hsped.03g11220.1 Hepe03g1122 566120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1122 454 PIRSF DNA_primase_large 2 454 IPR016558 -
Hepe03g1122 454 PANTHER DNA PRIMASE LARGE SUBUNIT 17 451 IPR007238 GO:0005658(PANTHER)|GO:0006269(InterPro)|GO:0006269(PANTHER)|GO:0006270(PANTHER)
Hepe03g1122 454 CDD PriL_PriS_Eukaryotic 25 438 IPR016558 -
Hepe03g1122 454 FunFam DNA primase large subunit 5 247 - -
Hepe03g1122 454 Pfam Eukaryotic and archaeal DNA primase, large subunit 174 438 IPR007238 GO:0006269(InterPro)
Hepe03g1122 454 Gene3D - 2 247 - -
Hepe03g1122 454 MobiDBLite consensus disorder prediction 1 24 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1122 K02685 - csv:101217274 829.706