Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe03g1140 | ATGGCAGAGCACAACAACAACAAGAGGAAGCAGCCACCATCATCATCATCAACAACAACAACAATACCATTAACACCATCTCCACCATCATCAGATATCAAAGACTTCAGTATCATAATTTCAAACAAAGATGACAACAAGAAACAGCTTCAAATTCAACAACAATTGCCTCCTAAACGTACCTCCAACAAAGACCGTCACAAGAAAGTCGATGGCCGCGGTCGCCGGATCCGCATGCCCGCCCTCTGCGCCGCCCGTGTCTTCCAATTGACTCGCGAATTAGGCCACAAGACCGACGGAGAAACCATCCAGTGGCTCCTCCAGCAGGCTGAGCCTTCGATCATCGCCGCTACAGGTACCGGCACCATCCCTGCTTCCGCCCTACACGCCGCTGGGGTCTCCGTCTCCGACCACGACACCTCCGTCTCCGCTGCCCTAACCCCCAAAATCGACCCCAGGCCGAATTGGGCGATGATGGGAGCCAATCTGAACAGATCTCACATGGCCACAGCCGGATTCTGGCCGTCGCTTGGTGGAATCGGGACGGGGTTTGTCACCGAGAATTCCGGTTCGATTATGCCGAAATTCGGGTTCCATGGATTCGAATTTCAGGGGATGAATTTGGGATCGGTGAATTTCCCGACGATTATCGGGAATCAGCATCATCATCATCAGCAAGTGCCGGGGCTGGAGCTAGGGCTTTCACAGGACGGGAATAATAACAATCTGAGGGGGATGTTGAATCCGCCATCGTTTTCCCAAATTTATCACCAATTCGGGCAAAATCGGGATTCTTCCGCCGCGCCATTGGAGCAAGAACAAGCTCCTGATAAAGACGATTCTCAAGAATCGAGATGA | 858 | 51.98 | MAEHNNNKRKQPPSSSSTTTTIPLTPSPPSSDIKDFSIIISNKDDNKKQLQIQQQLPPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGTGTIPASALHAAGVSVSDHDTSVSAALTPKIDPRPNWAMMGANLNRSHMATAGFWPSLGGIGTGFVTENSGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQHHHHQQVPGLELGLSQDGNNNNLRGMLNPPSFSQIYHQFGQNRDSSAAPLEQEQAPDKDDSQESR | 285 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 64607099 | 64609112 | + | Hsped.03g11400.1 | Hepe03g1140 | 566138 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe03g1140 | 285 | MobiDBLite | consensus disorder prediction | 7 | 59 | - | - | |
Hepe03g1140 | 285 | ProSiteProfiles | TCP domain profile. | 63 | 117 | IPR017887 | - | |
Hepe03g1140 | 285 | MobiDBLite | consensus disorder prediction | 232 | 269 | - | - | |
Hepe03g1140 | 285 | MobiDBLite | consensus disorder prediction | 1 | 75 | - | - | |
Hepe03g1140 | 285 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 17 | 244 | IPR005333 | GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER) | |
Hepe03g1140 | 285 | MobiDBLite | consensus disorder prediction | 230 | 285 | - | - | |
Hepe03g1140 | 285 | Pfam | TCP family transcription factor | 61 | 149 | IPR017887 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g1140 | Hepe-Chr3:64607099 | Hepe09g0125 | Hepe-Chr9:998999 | 1.25e-36 | dispersed | |
Hepe02g1690 | Hepe-Chr2:22930282 | Hepe03g1140 | Hepe-Chr3:64607099 | 1.05e-66 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55269 | PF03634 | TCP | 8.10E-31 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe03g1140 | - | - | - | 0.0 |