Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1143 ATGGCCGACGCCAACTTCGATCTCCCTGACGATCTTCTCTCCTCTCGCCCCTCCGATCACTCCTGGACGCCCAAAGTGGAAGCTTCTGGAGGGAATGATGAGGAGAAGGTGCTCACGGCCTTCCTTGATGACTCAAAAGACTCAGGGACATCAGAGAACAGCATACCTTTGTCTCCTCAATGGCTATATGCCAAACCAAGTGAACCTAAGATGGAAGTGCGTGCTCCAACACCAGTGTCCCTTGCTAGCTCCACTGATCTCAATCAGAAAGAGGGTTGGCGTCCAGATGGGTCTGAGGACAAGAAGGATTGGAGGAAAAATACTTCTGAAAATGAAAGTGGTCGCCGTTGGCGTGAGGAAGAGCGGGAAACTGGATTACTTGGTGGTCGCCGTAGGAAAACTGAGCGCCGCATTGATAACATATCAACTAAGGAGACACTGGAGAGTAGAGTCGTGCCTAATTCGGATAGATGGCATGATGGTCGTACTTCTGCGCATGATGGTCGTACTTCTGGGCATGATGGTCGTACTTCTGGGCATGATAGCCGTACTTCTAGTCATGATGCACGGCGTGACAGCAAATGGACATTGAGGTGGGGACCAGAGGACAAAGATAAGGAATCACGGATGGACAAGCGATCAGATGCTGATAAGGAAGATGTTCGCAATGACAGTCAATCCGTGAGTGGCAATCGTCCTGCTCCTGAGCGTGACTCCGATTCACGTGATAAATGGAGGCCCCGCCATAGAATGGAGAGCCATTCTGTTGGATCAACTTCCTCTCGTGCTGCACCTGGGTTTTCACTTGAGAGAGGGCGGGGAGATGGGGGGTCTAATTTAGGATTTACAATTGGACGAGGAAGGTCAAATACAATTGGGAGATCTTCTACTGGTCCCATTGGAGTTCCACTCTTGGATAAGATTGAAAATGTTCCTGGGAAACCAAGACACTCATCTCATGCTTTTTGTTACCCCAGGGGTAAGCTTCTTGACATATATCGGAGGCAGAAATTTGATTCATCATTCTCAGCTCAGCCTGATGATATGGATGAATTACAGCCTATGACTCAACCTAGTGTTGTAGAACCATTAGCTTTTGTTTCTCCGGATGCTGAGGAGGAGGCTATCCTTGGTGACATTTGGAAGGGAAAGATCACAAGTAGCGGAGTTGTTTACAGTTCATATAAAAAAGGGAAGCCAATTGAATGTATTTTAGGAGATCTAGACTCCATAGAGGGAAATCAGACTGGACTGGACTCAACTTTAGTATCCGAGAATGAAGCAGCAACTCCAACTGGAGATATTGGCAAAGCCACTCATGAAGTTACAAATTTTGATGCATGTCAAGATGCTAGTGTCAGGAGCCTTTGGAATCTTCCTTCAATGAGAGATGTCCTAGATGGAAAATATAGCAGCCATAAGGAAGAGGAAAAACGGTCCAATGCAGCCATTTCTATGTCAGACTCTGGTGAATTGGCCCACACAGTTTCTACTGTAGCCTCCCAACATGGGATGGAGATTGGTGGTGGACACCCTGGTACTCAGCTAAATGTTGGTGTGAATGGGCGAGCAGATTCTGATCATAAAAGGCCTCATAACTTTAATGAAATTGAGTTTGCAAATTCTTTTGATGTCAGATCCAAGCTTCATGATGATCCTAGTTCTATTTTCTTTATTCCCTTCTCTGAGCAAAATCCAAATAAAAGTTCTGATGTGAAATTTGAGGAGTTGAGTTTGTTCTATCTTGATCCTCAAGGGGTTATCCAGGGGCCATTTGTTGGGGCAGACATCATTTTGTGGTATGAACAAGGTTTCTTTGGGTTGGACCTGCCTGTTCGGTTGGCAGACGCCCCTGAAGCAACCCCGTTCTGTGAGTTGGGGGAGGTTATACCACATGTGAAAGTTAGAGAGGGAAGTGTTGATTGTGCTGATACGAAATCTCTTTCAGGCCAGTCTGGTGCCTCTGGAGGAATAATGGAGACCAATTTACCTTCTAAGCATCCAGCTCTTGATATGAATGACGCGTCCACAACAAATGAGGTTCATCGGTCATTGGCTGAATTACATAGCCTCTCCAATCAACACAACGCAGTTGGAATGTCTGAGACTGAAGCACCATTTCAATTGCATTCCAAGGGCCAAGGCTTTCATGATGTTGTTGCACAAGATGAAGAAATTGTGTTTTCTGGAAGACCTGGAAACGGTGGTTATCGAATTCCACACTCTTCTGGGGTGCCTTTGGCGAATTCTATCAGCCAACCTTCTCTTCTGAATGAGTTGACTGATCGCAGTGTGCCTGTTCAGAATGAAAATAAGTTGCACCCTTTTGGATTGCTGTGGTCTGAGCTAGAAGGTACACATATGAAACCAGTTGAAGTCACAAATTCGAAACATACCAAGTCAGTTAATAATATGCCTTCAAGCATGGGAAGACCTGCACCATTAGTTGGAAAGCCAGAAGCATCTCTCAATGCAGATACTTGGCTTGATGTTTACAGAAGAAGTATGCATTCTGACCAGAGTGTATACCAGGATGCGAATGTTGCTCATTCCCTGCCACATATAGAACAAGAATCTAATAGGTTTGATTTGGCAGATCAACTCATGTCGCATCAATATCATCAGGCACTTCAACAGCGGAATTTGTTGTCTCACTCTAATGAAGCGACCTTAGATCATCATATTCAACAGCAGAATCTTATTCACCAGCAGCAGCTGTTGGCTAATAGAAGTACACCCGATCTTGATCATTTCTTGAACCTACAGATGCAACAGCAACAACAACAGCAACAACAACAACAGCAACGGCAGCTGCAGTTACAACATCAATTACAGCAGCAACAGTTGCATCAGCAGCAAAAGCTTTTGCAGGAACAACATCAATCTCAAGTTCAACAGGCACTGCTTGAACAGTTGTTGCGCCGACAAATGCATGATTCAGGCCTTGGGCAGTCACATATTGATCCAATTCGAGCCAATAATGCTCTTGATCAGGTGATATTGGAGCAACGTCTTTTACATGAGCTACAGCAACAGTCTCATCATCAACAAAGATCTGTTGATCCATCTTTTGAGCAGCTTATTAAAGCAAAGTTTGGTCACTTGCCCCCACAACAAGAACATCAAAGAGATTTGTCTGAACTAATATCTCGGGCTCAGCACGGACAGATGCAATCATTGGATCATCAAATTCTCCAGCAGGAGATGCTACAGTCAAGACAGTTGTCTATGGCATTAAGGCAGAGGGCCAATATGGAGGACAAGAGACATGTTGGTGGTCCTATCTGGCCAGAGGATGATGCTGATCAGCAGTTTTTCAGAGGACATGCCGGCGCACAACGTGTGCCGTCTTCGGGGTTTGAATTATACCAGCATCAACAGAGGCAATCTCATGTAGAGCAGCTGAATCACCTTGAGCGCAATCTATCATTTCAAGATCGGTTTAGACTAGGCCTTTATGAGCCTGCGTCACTTCCAATGGAGAGATCAATATCCTATCCTGATGTTGCTCAGGGGATGAATCTGGATGTTGTTAATGCTATGGCTCGTGCTCGTGCTTTAGAATTGCAAGAATCCAGTGCACATAATCCATCTGGTGGTCAACTGGGGCAATATCCACCCGGTACCATTCCACAGAACCCTCACCACTCGCTAGTCAGTAACCAATTTCATGTTTCACATTTTGATGGAACTGAAGGTAGCTGGTCTGAGAAAAATGACCGACTTGGAAATGATTGGATGGAGTCTCGCATTCAACAACTGCATATCAATGCTGAGCAACAGAAAAGGGAGTTGGAAGCTAAAATGATTTCTGAAGATCCAACTTTATGGATGTCAGATGGGCTTAATGATGAAAAGTCAAAGCAGTTATTAATGGAACTCCTCAATCAGAAATCTGTTCATCAACCTACAGAATCCTTGGATGTAGGAAATGGAGCATCTTTCAATAGGGCATCATCTGGCCTCTATTCTGGATCAGGCTCTCTGGATCAGTCGTTCCTTCTTCATTCAGGCAAGGAAAGAGGTTTGAACAACACATTGTCTGTGGGGTCTTTTGGTTCTAATTCATATGAACCACTGCAAGATGAGCATCCTGGCAGCTTGACAAGCAATGAGAAGGTGGTCCCATACAGGTCCGATTCCGGCTCTGTTGTCAAGGGAGCATCAATTTTAGCTGGTCTTAAAGCCAATGGTGCGATTAACAGCTCTAGTTCTAGCATGGTCGGTAACCTTTCTATCAATAAAGACGTCTTAGAGGTGGAGGGCAGGGCTCGTGGATTGAAAGGTGAGGGTTTGAAGAAAAATCAGGCTTTTCAAATTCAAGAAAGCATGCTTGATCAAGTTGCATCTGCTGATCACGGGGAATTTTCAATGGATACTCATACCCTTAGTCGGCATTCTTCTCTTGGTTCTGCTGGCTTTCACAATGAAAAGATTGCCAATACGTTCCCAGAAGAGATTCCTAAAGAACCAGTGACCATTCACGTTAAAGAAAATATTTTATTGAAACGCCCTCCTGTCTCGCGCACTTCGGCGTCCCAGGATGGATTGTCTGTCCTCATTTCTGATCCGGTTGTTAGAGGGAAGAATCCAGATGGAGGAAGACCGGACCCAACTGCTATCTTGGTGAACCAAGAAAACATGGCTGCTGTGAAGAAAGAGATGCGTTTTCGGCGCTCTTCTTCTTGTAGCGACAGTGACGTATCGGAGACTTCTTTTATTGATATGCTGAAGAAGACGGCTCCACAAGAAGCCCATTTGACGACGACCGGAGTTCCAGAGCCATCAGACGGAATGCAAGGAGGGAAAGGTGGGAAAAAGAAAGGGAAGAAGGGGAGACAAATAGACCCCGCACTACTCGGTTTCAAAGTCACGAGCAACCGAATCATGATGGGTGAAATTCAACGCTTAGACGATTAG 4920 45.18 MADANFDLPDDLLSSRPSDHSWTPKVEASGGNDEEKVLTAFLDDSKDSGTSENSIPLSPQWLYAKPSEPKMEVRAPTPVSLASSTDLNQKEGWRPDGSEDKKDWRKNTSENESGRRWREEERETGLLGGRRRKTERRIDNISTKETLESRVVPNSDRWHDGRTSAHDGRTSGHDGRTSGHDSRTSSHDARRDSKWTLRWGPEDKDKESRMDKRSDADKEDVRNDSQSVSGNRPAPERDSDSRDKWRPRHRMESHSVGSTSSRAAPGFSLERGRGDGGSNLGFTIGRGRSNTIGRSSTGPIGVPLLDKIENVPGKPRHSSHAFCYPRGKLLDIYRRQKFDSSFSAQPDDMDELQPMTQPSVVEPLAFVSPDAEEEAILGDIWKGKITSSGVVYSSYKKGKPIECILGDLDSIEGNQTGLDSTLVSENEAATPTGDIGKATHEVTNFDACQDASVRSLWNLPSMRDVLDGKYSSHKEEEKRSNAAISMSDSGELAHTVSTVASQHGMEIGGGHPGTQLNVGVNGRADSDHKRPHNFNEIEFANSFDVRSKLHDDPSSIFFIPFSEQNPNKSSDVKFEELSLFYLDPQGVIQGPFVGADIILWYEQGFFGLDLPVRLADAPEATPFCELGEVIPHVKVREGSVDCADTKSLSGQSGASGGIMETNLPSKHPALDMNDASTTNEVHRSLAELHSLSNQHNAVGMSETEAPFQLHSKGQGFHDVVAQDEEIVFSGRPGNGGYRIPHSSGVPLANSISQPSLLNELTDRSVPVQNENKLHPFGLLWSELEGTHMKPVEVTNSKHTKSVNNMPSSMGRPAPLVGKPEASLNADTWLDVYRRSMHSDQSVYQDANVAHSLPHIEQESNRFDLADQLMSHQYHQALQQRNLLSHSNEATLDHHIQQQNLIHQQQLLANRSTPDLDHFLNLQMQQQQQQQQQQQQRQLQLQHQLQQQQLHQQQKLLQEQHQSQVQQALLEQLLRRQMHDSGLGQSHIDPIRANNALDQVILEQRLLHELQQQSHHQQRSVDPSFEQLIKAKFGHLPPQQEHQRDLSELISRAQHGQMQSLDHQILQQEMLQSRQLSMALRQRANMEDKRHVGGPIWPEDDADQQFFRGHAGAQRVPSSGFELYQHQQRQSHVEQLNHLERNLSFQDRFRLGLYEPASLPMERSISYPDVAQGMNLDVVNAMARARALELQESSAHNPSGGQLGQYPPGTIPQNPHHSLVSNQFHVSHFDGTEGSWSEKNDRLGNDWMESRIQQLHINAEQQKRELEAKMISEDPTLWMSDGLNDEKSKQLLMELLNQKSVHQPTESLDVGNGASFNRASSGLYSGSGSLDQSFLLHSGKERGLNNTLSVGSFGSNSYEPLQDEHPGSLTSNEKVVPYRSDSGSVVKGASILAGLKANGAINSSSSSMVGNLSINKDVLEVEGRARGLKGEGLKKNQAFQIQESMLDQVASADHGEFSMDTHTLSRHSSLGSAGFHNEKIANTFPEEIPKEPVTIHVKENILLKRPPVSRTSASQDGLSVLISDPVVRGKNPDGGRPDPTAILVNQENMAAVKKEMRFRRSSSCSDSDVSETSFIDMLKKTAPQEAHLTTTGVPEPSDGMQGGKGGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRLDD 1639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 64669961 64678699 - Hsped.03g11430.1 Hepe03g1143 566141

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1143 1639 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1639 - -
Hepe03g1143 1639 MobiDBLite consensus disorder prediction 1585 1614 - -
Hepe03g1143 1639 MobiDBLite consensus disorder prediction 92 225 - -
Hepe03g1143 1639 Gene3D - 562 648 IPR035445 -
Hepe03g1143 1639 MobiDBLite consensus disorder prediction 235 255 - -
Hepe03g1143 1639 Coils Coil 921 943 - -
Hepe03g1143 1639 SMART gyf_5 577 632 IPR003169 GO:0005515(InterPro)
Hepe03g1143 1639 Pfam GYF domain 580 618 IPR003169 GO:0005515(InterPro)
Hepe03g1143 1639 MobiDBLite consensus disorder prediction 1 298 - -
Hepe03g1143 1639 MobiDBLite consensus disorder prediction 1191 1217 - -
Hepe03g1143 1639 SUPERFAMILY GYF domain 574 632 IPR035445 -
Hepe03g1143 1639 ProSiteProfiles GYF domain profile. 576 627 IPR003169 GO:0005515(InterPro)
Hepe03g1143 1639 MobiDBLite consensus disorder prediction 44 60 - -
Hepe03g1143 1639 Coils Coil 1244 1268 - -
Hepe03g1143 1639 MobiDBLite consensus disorder prediction 798 818 - -
Hepe03g1143 1639 MobiDBLite consensus disorder prediction 283 297 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1143 K18730 - - csv:101204211 2604.32
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1143 Hepe-Chr3:64669961 Hepe10g0652 Hepe-Chr10:8677893 9.44e-20 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1304 . . . . Bpe13g00818 . . . . . . . . . . . . . . . . . . . Cla06g00177 Cam06g0034 Cec06g0196 Cco06g0191 Clacu06g0193 Cmu06g0187 Cre06g0959 . . . . . . . . Blo02g00198 . . . Bpe14g00803 . . . . . . . . . . . . Bhi12g02418 . . . Hepe03g1143 . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003820 2 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 4 1 2 44