Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1152 ATGGGTTGTTTTCCTTGTTTCGATTCGAGGGAAGAGGAGAAGCTGAATCCTGAAAAGGAAAGTGACGATAGTAATCAAGATCATCCAATGGTTCCACCAAACATTGTCAAATTGCCTTCTGGAATAGACAAACTTAGAGCGAAAAGTAATGGAGGTTCCAAAAGGGAACAGCAAATTCCCAAGGATGTGCCTCTCCCTCTTGTCAATATTTCTGCTCAAACTTTCACTTTCCGGGAGCTTGCGATTGCGACGAAGAATTTTAGACCTGAGTGTTTTATTGGGGAAGGAGGTTTTGGACGTGTATACAAAGGGAAGCTTGAAAGCACAGGCCAGATTGTTGCCGTTAAACAGTTGGATAGGAATGGTCTTCAAGGCAACAGAGAATTTCTAGTGGAGGTTCTCATGCTTAGCCTTCTACATCATTCAAATTTGGTGAATCTGATTGGTTACTGTGCTGATGGGGAACAACGGCTTCTTGTGTATGAGTTCATGCCTTTGGGATCATTGGAAGATCATCTTCACGAAATTCCACCTGATAAGGAACCCCTAGATTGGAACACAAGAATGAAAATAGCTGCTGGTGCAGCCAGAGGTTTAGAGTACTTGCATGACAAGGCAAACCCTCCAGTTATTTATAGAGATTTCAAATCCTCCAATATATTACTTGAAGAAGGATTCCATCCAAAGCTTTCTGATTTTGGCCTTGCAAAGCTTGGCCCTGTTGGAGATAAATCTCATGTTTCCACCAGGGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTACGCCATGACCGGACAATTAACAGTCAAGTCCGATGTTTATAGTTTCGGTGTCGTCTTCTTAGAGTTGATTACTGGACGGAGAGCCATTGATAGCACCCGACCCCAAGGCGAACAGAACCTTGTCACTTGGGCACGCCCATTTTTTAACGATCGCAGAAGATTCTCGAAATTGGCTGATCCACATATGCAGGGGCGGTATCCCATGCGAGGTCTCTACCAGGCTCTAGCTGTGGCATCCATGTGTACCCAAGAACAGGCTGCAGCCCGTCCACTCATTGGAGATGTGGTCACTGCCCTGTCTTATTTGGCAAATCAATCCTATGATCCAAGTTCTCCTTCAGGTACTGCTGCTGCTCAGAGAGGTTCTGGTGATCGGGACGAAAGACGGAACAGAGACGAGAGAGGTGGAGGGGCAGTAAAGAATGAAGAAGGGGGAGTATCCGGACGAAGGTGGCCATTGGATGGTCCCGAGAAGGACGACTCCCCAAGGGAGACTGCTAGGATTTTGACTAGGGATTTAGACAGAGAACGTGCAGTCGCTGAAGCCAAGACGTGGGGAGAGAATTGGCGAGAAAAAAGACGACAGAGCGCACAAGGCAGTTTTGATGGCTCTAATGGGTAA 1407 46.48 MGCFPCFDSREEEKLNPEKESDDSNQDHPMVPPNIVKLPSGIDKLRAKSNGGSKREQQIPKDVPLPLVNISAQTFTFRELAIATKNFRPECFIGEGGFGRVYKGKLESTGQIVAVKQLDRNGLQGNREFLVEVLMLSLLHHSNLVNLIGYCADGEQRLLVYEFMPLGSLEDHLHEIPPDKEPLDWNTRMKIAAGAARGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRRAIDSTRPQGEQNLVTWARPFFNDRRRFSKLADPHMQGRYPMRGLYQALAVASMCTQEQAAARPLIGDVVTALSYLANQSYDPSSPSGTAAAQRGSGDRDERRNRDERGGGAVKNEEGGVSGRRWPLDGPEKDDSPRETARILTRDLDRERAVAEAKTWGENWREKRRQSAQGSFDGSNG 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 64977080 64984170 + Hsped.03g11520.1 Hepe03g1152 566150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1152 468 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524(InterPro)
Hepe03g1152 468 FunFam Serine/threonine-protein kinase PBS1 62 163 - -
Hepe03g1152 468 MobiDBLite consensus disorder prediction 367 468 - -
Hepe03g1152 468 MobiDBLite consensus disorder prediction 383 401 - -
Hepe03g1152 468 PANTHER OS07G0668900 PROTEIN 35 382 - -
Hepe03g1152 468 MobiDBLite consensus disorder prediction 1 38 - -
Hepe03g1152 468 SUPERFAMILY Protein kinase-like (PK-like) 62 361 IPR011009 -
Hepe03g1152 468 Gene3D Transferase(Phosphotransferase) domain 1 164 377 - -
Hepe03g1152 468 MobiDBLite consensus disorder prediction 414 459 - -
Hepe03g1152 468 FunFam Serine/threonine-protein kinase PBS1 164 379 - -
Hepe03g1152 468 Pfam Protein kinase domain 92 296 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g1152 468 MobiDBLite consensus disorder prediction 7 26 - -
Hepe03g1152 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g1152 468 ProSiteProfiles Protein kinase domain profile. 87 364 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g1152 468 Gene3D Phosphorylase Kinase; domain 1 48 163 - -
Hepe03g1152 468 CDD STKc_IRAK 93 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1152 Hepe-Chr3:64977080 Hepe05g1473 Hepe-Chr5:64166351 8.70e-224 dispersed
Hepe03g1152 Hepe-Chr3:64977080 Hepe01g0871 Hepe-Chr1:72816633 2.64e-177 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72656 PF00069 Pkinase 3.10E-44 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1152 K13430 - csv:101219880 872.078