Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1193 ATGGAAACCACCACTTATTTTCCAGTTTCAATCACTTTGATCGCTCTGATAATTTCAATTTTCTTCTTCCAGAAACGAAAAACCAGAAACAAAAATCTCCCTCCATCTCCATTTTCCCTCCCTCTAATCGGCCATCTCCACCTCCTCAAACACCCAATTCACAGAACCTTACACTCCCTCTCCCAAAAACACGGCCCAATCTTCACTCTCCGCCTCGGCGCCCGTCTCGTCGTCGTCGTCTCCTCCACCTCCGCCGTCGAACAATGCTTCACCACAAACGACATCGTCTTCGCCAACCGTCCCGAGTTCGTCTCCGGCAAGTACCTCAGCTACGGCAACAGCACCCTCGGCGCCGCCCCCTACGGCGATCACTGGCGCAATCTCCGCCGACTGAGCGCCACAGAAGTCCTATCCTCAATCCGCCTCAACACGTCGGCAGGAATCCGAAGGGAGGAAGTTAACATCCTATTACGGAAATTATACAAAGTTAATTCGAGTGGCGAATTTGGGGATACGGCCGTGGAGATGAAATCGCGATTCTCGGAGCTGACGTTTAATATAATCATGAGAATGGTGGCCGGAAAACGGTACTACGGCGAGGAGGTGGCGGAATTGGAAGAGGCGAAGAAGTTTAGAGAGATTATGGAGAAGGCTTTTCAATTGGGGTCGTATCCGGGCGATTTCTTGCCTTTCTTGAAGTGGGTTGATCGTCAATATTTGAAACGGGTGGAAAGTCTTGGGAAAGATACGGATTTTTTCTTGCAGAATTTGGTGGATGAACATCGGAGGAATCAAGAACAGGGGAAGAAGATGAACACGATGATTAGCCATTTGTTGTGTTTGCAGGAGTCTCAGCCTCATTATTACACCGATGAAATTATCAAAGGCCTTATCATTACAATTTTATCAGCAGCAACCGAAACATCCGCCGTAACAATAGAATGGGCAATGTCCAATCTCCTCAACAATCCAGAATCCTTAAACAAAGCAAGAAACGAACTCGACACACAAATCGGACAAGACCGTTTTCTTGACGAAGAAGACATCCCCAATCTCCCCTACCTTCAAAACATAATCTCCGAGACACTCCGCCTATATCCAGCAGCTCCACTCCTAGCTCCACATTTGTCATCCGACAATTGTTCTCTCGGAGGATATAACATTCCCGCCGACACAATCTTAATGGTCAATGCGTGGTCCATCCAAAGAGACCCCAAGGTTTGGGATGACTCGACCAGCTTCAAACCAGAGAGGTTCGAAAATGGTGCAACCGGAGGGAACAATAATGCATACAGATACTTGCCGTTTGGGTTGGGTCGGAGGGCTTGTCCTGGGATGGGTATGGCTAACCGTGTGGTGGGATTGACTTTGGGTTCGTTGATTCAAGGGTTCGAGTGGAAGAGGGTTGGTGATAAGGAAATTGATATGACTGAAGGTCAAGGGATCTCTATGCCTAAAGTTGAGCCGTTGGTGGCATTGTGTCGACCTCGCCCTATCATGGAAAAGGTTGCATTTTGA 1518 48.16 METTTYFPVSITLIALIISIFFFQKRKTRNKNLPPSPFSLPLIGHLHLLKHPIHRTLHSLSQKHGPIFTLRLGARLVVVVSSTSAVEQCFTTNDIVFANRPEFVSGKYLSYGNSTLGAAPYGDHWRNLRRLSATEVLSSIRLNTSAGIRREEVNILLRKLYKVNSSGEFGDTAVEMKSRFSELTFNIIMRMVAGKRYYGEEVAELEEAKKFREIMEKAFQLGSYPGDFLPFLKWVDRQYLKRVESLGKDTDFFLQNLVDEHRRNQEQGKKMNTMISHLLCLQESQPHYYTDEIIKGLIITILSAATETSAVTIEWAMSNLLNNPESLNKARNELDTQIGQDRFLDEEDIPNLPYLQNIISETLRLYPAAPLLAPHLSSDNCSLGGYNIPADTILMVNAWSIQRDPKVWDDSTSFKPERFENGATGGNNNAYRYLPFGLGRRACPGMGMANRVVGLTLGSLIQGFEWKRVGDKEIDMTEGQGISMPKVEPLVALCRPRPIMEKVAF 505
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 65996350 65999692 + Hsped.03g11930.1 Hepe03g1193 566191
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1193 505 PANTHER CYTOCHROME P450 82C3-RELATED 14 497 IPR050651 -
Hepe03g1193 505 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1193 505 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1193 505 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1193 505 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1193 505 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1193 505 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1193 505 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1193 505 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1193 505 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1193 505 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1193 505 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1193 505 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1193 505 Pfam Cytochrome P450 34 488 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1193 505 CDD CYP81 65 490 - -
Hepe03g1193 505 FunFam Cytochrome P450 family protein 24 500 - -
Hepe03g1193 505 Gene3D Cytochrome P450 19 492 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1193 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Hepe03g1193 505 SUPERFAMILY Cytochrome P450 34 497 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1806 Hepe-Chr1:83078815 Hepe03g1193 Hepe-Chr3:65996350 2.93e-175 dispersed
Hepe03g1193 Hepe-Chr3:65996350 Hepe04g1276 Hepe-Chr4:68311447 5.11e-196 dispersed
Hepe03g1193 Hepe-Chr3:65996350 Hepe03g1194 Hepe-Chr3:66008405 3.94e-49 tandem
Hepe03g1193 Hepe-Chr3:65996350 Hepe04g0354 Hepe-Chr4:51306476 5.85e-99 wgd
Hepe03g1193 Hepe-Chr3:65996350 Hepe06g1916 Hepe-Chr6:70298329 2.26e-41 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1193 K13260 - cmo:103498908 819.305