Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1195 ATGGAAGACTCCATCATCTCACAATACTCAGCCATTTCAATTCTCGCAATTCTTCTCATCCTCGCAATAACCCATTTCTTCAAACCCAATTCCCGCAAAAATCTCCCTCCATCTCCACCGTCCATTCCACTCATAGGTCACCTCCATCTCCTGAAGCCCCCAGTTCACAGAAGCTTACTCACTCTCTCACAAAACTACGGTCCACTCCTCTCTCTAAACTTCGGCTCTCGTCTAGTCGTCGTCGTCTCCTCAATGGAAGCCGCCGACGAATGCTTCACAAAAAACGACATCGTTTTCGCCAACCGCCCCGACTTCGCCGTCAGCCGCTGCTTGAGTTACAACCACACCACCCTCGGAGCGGCTCCGTACGGCGACCACTGGCGCAAACTCCGCCGAGTCAGCGCTCTCGAAATTCTGTCGGCGAGTCGCCTCAACGCGAACCACGCCATTCGGAGAGACGAGGTGAGAAGGGTGGTGCAGAAATTATCTCGTGCTTCCAGAGATGGGTTTGCCAAAGTGGAGTTTAAATCGTTGGTGAAAGAATTGACGTTGAATATTACTATGAGAATGGTTGCTGGGAAGAGGTATTTTGGTGAAGAAGCGGCTGAAAGTAGTGAAGCGGCGACGTTTAAAGTTATTGTTGATCAGCTCTTTGAATTTACGTTGTCTTCTTATCCAGCTGATTTTTTGCCGATTTTGAAGTATGTTGATTTTGGAGGCTTCATGAAGAGAGCAAAGAAGCTCATCACGAGGGTGGATTCATTTTGGCAAGGATTGATCGACGAGCATCGAACCACCAATAGAATTATTAATGAAGAAATGGAGAATAGTATGGTTGCTCATTTACTCAAGTTGCAGGAGTCGCAACCTCAATATTACACTGATGACATTATCAAAGGCCTCATTTTGACAATGATACTAGGTGGCTCAGACACCACAGCCGTGACAATAGAGTGGGCAATGTCAAATCTCTTGAACCATCCAGCAGTGTTAAAGAAGGCAAGAGATGAATTAGAGTCTCAACTTGGAGATCAAATGCTCGAAGAATCTGATCTTCCAAAGTTAACCTACCTACGTTGTATAGTCTTAGAAACTCTTCGCTTGTACCCAGCTGGCCCACTCCTACTGCCACATAGGTCATCTGCTGACTGTACCATATCGGGATACGACGTGCCACGTGACACAATCTTATTGGTCAACGCGTGGGCCATCCACAGGGACCCTACATTGTGGGATGATCCACTCAGTTTTAAACCAGAGAGATTTGAGAATGGTGGGGATGGTGATGCTAATAATAAGTTGATGATTGCATTTGGTTTGGGAAGGAGAGCTTGTCCTGGAACTGGAATGGCACATCGAGTTTTGGGTTTAACTTTGGGATTGTTGGTTCAATGTTTTGATTGGAAGAGTATTGAAGGGAAGGAAGTGGATATGACTGAAGGAAAAGGTGTTAGTATGCCTAAAGCGGAGCCACTAGAAGCACTTTGTAAAGCACGAGAAATTGCTTGCAAGTTGCTTTGA 1521 46.09 MEDSIISQYSAISILAILLILAITHFFKPNSRKNLPPSPPSIPLIGHLHLLKPPVHRSLLTLSQNYGPLLSLNFGSRLVVVVSSMEAADECFTKNDIVFANRPDFAVSRCLSYNHTTLGAAPYGDHWRKLRRVSALEILSASRLNANHAIRRDEVRRVVQKLSRASRDGFAKVEFKSLVKELTLNITMRMVAGKRYFGEEAAESSEAATFKVIVDQLFEFTLSSYPADFLPILKYVDFGGFMKRAKKLITRVDSFWQGLIDEHRTTNRIINEEMENSMVAHLLKLQESQPQYYTDDIIKGLILTMILGGSDTTAVTIEWAMSNLLNHPAVLKKARDELESQLGDQMLEESDLPKLTYLRCIVLETLRLYPAGPLLLPHRSSADCTISGYDVPRDTILLVNAWAIHRDPTLWDDPLSFKPERFENGGDGDANNKLMIAFGLGRRACPGTGMAHRVLGLTLGLLVQCFDWKSIEGKEVDMTEGKGVSMPKAEPLEALCKAREIACKLL 506
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 66027551 66030130 + Hsped.03g11950.1 Hepe03g1195 566193
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1195 506 CDD CYP81 67 492 - -
Hepe03g1195 506 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1195 506 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1195 506 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1195 506 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1195 506 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1195 506 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1195 506 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1195 506 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1195 506 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1195 506 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1195 506 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1195 506 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1195 506 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1195 506 Pfam Cytochrome P450 36 488 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1195 506 SUPERFAMILY Cytochrome P450 36 499 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1195 506 Gene3D Cytochrome P450 28 504 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1195 506 FunFam Cytochrome P450 family protein 27 502 - -
Hepe03g1195 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Hepe03g1195 506 PANTHER CYTOCHROME P450 82C3-RELATED 18 499 IPR050651 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1195 Hepe-Chr3:66027551 Hepe04g1276 Hepe-Chr4:68311447 4.04e-183 dispersed
Hepe03g1195 Hepe-Chr3:66027551 Hepe03g1196 Hepe-Chr3:66051177 2.66e-307 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1195 K13260 - csv:101208069 793.112