Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe03g1204 | ATGGCCGGCTTGGTCACCGGTTCCCAACACAACCCTCATGCTGCCGACGAGAGTCTAAATGGACCTCGACCGTCGTCCAAAACATGTCGAGTTTGTGGCGACGAAATAGGAGTACATAAAGAAGACGGAAAAGTATTCGTGGCGTGTCTCGTGTGCAATTTCCCCGTTTGTCGTCCTTGTTACGAGTACGAAAGGAGTGAAGGCAATAAGTGTTGTCCTCAATGCAACACTCGCTACAAACGTCAGAAAGGCTCTCCAAGAATCATTGGCGATGATGAAGAAGCTGATGATGCAGATGATTTTGATGAAGAATTCCCCATTAAACATCACAATGATGACTTTGAAACAAAACAGACTAATCATTTGGAAAATGATGCTTCCAACTACAACCAGCAGAATTGGAAACAAAATGTTCAGACTTCCTTCTCAGTTGCAGGCAGTGTGAACGGCAAGGAATTTGAAGGCGAAAAGGAAGGTTATGGGAATGCAGAATGGAAGGAAAGAATCGATAAATGGAAAGTGAGGCAAGAGAAGAGAGGTTTGGGGAACAAACAAAATGAACCCGAAGAAGATGACTATCTATTGGCCGAAGCTCGGCAACCTCTATGGCGGAAAGTTCCAATTCCGTCGAGCAAAATCAGTCCATATCGCATAGTCATAGTCCTCCGCCTCGTAATTCTCGCTTTGTTCTTCCGTTTCCGGATCCTAACTCCGGCCTACGACGCCTACCCCTTGTGGCTCATCTCCGTTATCTGCGAAATCTGGTTCGGCATCTCTTGGATTCTCGATCAGTTCCCCAAATGGGCTCCGATCAACCGGGAGACGTATCTCGATCGTCTGTCCATGCGTTTCGAGCGGGAAGGGGAACCCAACCACCTGGCTCCGGTCGACTTCTTCGTCAGTACCGTGGACCCTCTGAAGGAGCCTCCGATCATCACGGCGAACACGGTGCTCTCCATCCTCGCTGTGGACTATCCGGTGGAGAAGGTCAGCTGCTACGTGTCCGACGACGGAGCGTCCATGCTGCTGTTCGACACGCTGGCGGAGACGGCAGAGTTTGCTCGGAGATGGGTGCCGTTCTGCAAGAAGTTCAGTGTGGAGCCTAGGACGCCGGAGTTTTACTTCTCGCAGAAGATGGATTACTTGAAGGATAAGGTGGTGGCGAGCTTTGTGAAGGAGAGGCGGGCGATGAAGAGGGAATATGAGGAATTCAAGGTGAGGATCAATGCGTTGGTGGCGAAGGCGCAGAAGAAACCAGAAGAGGGATGGGTTATGCAGGATGGAACTCCATGGCCGGGAAACCTTACTCGTGATCATCCTGGCATGATACAGGTGTATCTAGGAAGGGAAGGTGCACTTGATGTAGATGGTAAAGAGTTGCCTCGTCTTGTATACGTTTCTCGTGAGAAACGCCCTGGATATCAGCACCACAAGAAAGCTGGTGCTATGAATGCTCTTGTTCGAGTCTCTGCAGTCCTCACAAATGCACCATTCATCTTAAATCTGGATTGTGATCACTACGTCAACAATAGCAAAGCTGTAAGGGAAGCCATGTGTTTTCTAATGGACCCTCAGCTTGGAAAGAAGCTTTGCTATGTTCAGTTTCCTCAAAGATTTGATGGTATTGATCGTCACGACAGATACGCTAATCGGAATATTGTGTTCTTTGATATCAACATGCGAGGACTGGATGGAATCCAAGGACCAGTTTATGTTGGCACAGGATGCGTCTTCAACAGGCCGGCTTTATATGGATATGAACCACCAGTCTCTGAGAAAAGACAAAAGATGACATGCGATTGCTGGCCTTCGTGGTGTTCCTGCTGCTGCGGTGGTTCGAGGAAGTCGAAGTCGAAGAAGAAAGGAGAAAGAGGTTTGCTTGGAGGCCTGTTCACAAAGAAGAAGAAAATGATGGGGAAGAGTTACGTAAGGAAAGGGTCTGGACCAGTTTTTGATCTTGAAGAGATTGAAGAAGGGTTTGAAGGTTATGATGAGTTGGAGAAGTCATCACTTATGTCACAAAAGAATTTCGAGAAAAGATTCGGGCAGTCGCCAGTTTTCATCGCTTCCACCCTCAAGGAAGATGGAGGTCTTCCAGAAGGGACTAACAGCACATCACTTGTTAAAGAAGCCATCCATGTGATAAGCTGTGGTTATGAAGAGAAAACAGAATGGGGAAAAGAGGTTCGTGGCTGA | 2196 | 47.95 | MAGLVTGSQHNPHAADESLNGPRPSSKTCRVCGDEIGVHKEDGKVFVACLVCNFPVCRPCYEYERSEGNKCCPQCNTRYKRQKGSPRIIGDDEEADDADDFDEEFPIKHHNDDFETKQTNHLENDASNYNQQNWKQNVQTSFSVAGSVNGKEFEGEKEGYGNAEWKERIDKWKVRQEKRGLGNKQNEPEEDDYLLAEARQPLWRKVPIPSSKISPYRIVIVLRLVILALFFRFRILTPAYDAYPLWLISVICEIWFGISWILDQFPKWAPINRETYLDRLSMRFEREGEPNHLAPVDFFVSTVDPLKEPPIITANTVLSILAVDYPVEKVSCYVSDDGASMLLFDTLAETAEFARRWVPFCKKFSVEPRTPEFYFSQKMDYLKDKVVASFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNLTRDHPGMIQVYLGREGALDVDGKELPRLVYVSREKRPGYQHHKKAGAMNALVRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNIVFFDINMRGLDGIQGPVYVGTGCVFNRPALYGYEPPVSEKRQKMTCDCWPSWCSCCCGGSRKSKSKKKGERGLLGGLFTKKKKMMGKSYVRKGSGPVFDLEEIEEGFEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLKEDGGLPEGTNSTSLVKEAIHVISCGYEEKTEWGKEVRG | 731 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 66185329 | 66191374 | - | Hsped.03g12040.1 | Hepe03g1204 | 566202 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe03g1204 | 731 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 14 | 103 | IPR013083 | - | |
Hepe03g1204 | 731 | Coils | Coil | 394 | 414 | - | - | |
Hepe03g1204 | 731 | CDD | mRING-HC-C4C4_CesA | 27 | 78 | - | - | |
Hepe03g1204 | 731 | MobiDBLite | consensus disorder prediction | 11 | 25 | - | - | |
Hepe03g1204 | 731 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 397 | 588 | IPR029044 | - | |
Hepe03g1204 | 731 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 202 | 729 | - | GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER) | |
Hepe03g1204 | 731 | Pfam | Cellulose synthase | 296 | 729 | IPR005150 | GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro) | |
Hepe03g1204 | 731 | Pfam | Zinc-binding RING-finger | 25 | 96 | IPR027934 | - | |
Hepe03g1204 | 731 | SUPERFAMILY | RING/U-box | 23 | 101 | - | - | |
Hepe03g1204 | 731 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 310 | 583 | IPR029044 | - | |
Hepe03g1204 | 731 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Hepe03g1204 | 731 | FunFam | Cellulose synthase | 413 | 587 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g1204 | Hepe-Chr3:66185329 | Hepe06g0198 | Hepe-Chr6:7163101 | 1.03e-309 | dispersed | |
Hepe03g1204 | Hepe-Chr3:66185329 | Hepe02g1128 | Hepe-Chr2:13952233 | 2.71e-156 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe03g1204 | K10999 | - | csv:101205733 | 1278.46 |