Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1226 ATGGATGAGAGTTCAGGATCAAACAATGGAAACCACAGTGTTTCTTTGAATATCAAAGATGATTCTACAGCGGATTGCGTCCCTGTACTTTTCCTTCAGAAGTTGATTGCAGAGGTGATGGGGACATATTTCTTAATATTTGCAGGGGAAGCTTCTGTATTAGTGAATTTGAACAAAGACGGAGTCATCACTTTCCCAGGGATTTCAATTGTTTGGGGTTTGGTTGTAATGGTGATGATCTATTCTGTTGGTCATATATCTGGTGCTCATTTTAACCCTTCTGTCACCATAGCCTTTGCCATTACCATAAGATTTCCATGGAAAGAGGTGCCAGCATATTTGGTAGCTCAAGTTATTGGATCAACATTAGCAAGTGGGACACTTAGGCTAATATTTAATGGAACACAAGACCACTTTCCAGGAACTCTCCCTAAATCACACACACACAAACGGAAAATTCCGCCCCTAACTATAGGTATATACAGCTCTTTGTGGGTATTCTTTTTCCTTGTGGTGGCTGAATGCCGTGAAAACGCCGCCTCCGCCACCATTTCTTCTCTTCCGCCGTACAATTCCGGTGTCCGGCTCCCTCCGGTAACGACACCAACTCTTGGGGATGACGTTCCACCGGCTATCTATGACCTTCCTCCTCACCTGTTGGATGCTCTGGCTTCGCACCTGCCACCGTTGGCTTTACAGAATTTACAGTCAGGAATGCCATTTGAGCTCCAGAATGAAGATGAATATGATAATGATTGCCTTAAGGGTGGGCGGAAGCGCAGAAGGGACTGTAAATTTAATTTAGCATGGAAGAAGAATTTCAATTTACGATGGTCAAAGTTAACGGATGCTATCCAGCCAGATGACTGGCAGCAGATATATTGGGAGAGGCACTTGCAAAGTTGCCTAGATGAAGCAGCAGAAATAGCCTCACTACCATCTTTTTCTAAATGCATTGGAGAAATAGAGATGTCAGATTCTATATTGAAATATATTGCCAGCGAAGGGTCTGTTCATTTCTTGTGCGGAAAGTATAGAAAACTAAGCTATCATTGCCAACAATTTGGGTGCTATGCTCAATGTTTGAGCCTTCAGAGTGTTCTCTGTCTTTCAGAAATTTGTCATATATTGAGAAGCTGCAAGTTGCAGACTTTGGTATTACGGTGGATCAGATTCCAGGAGCAAGTCAATGGATTATGCAAACTCCTAAACCAGAACAGAGAAACTTTAACATCCCTCGAACTCATTCATTGCAAGCTATCTTCAACTTCTATTAATTCAATTTCTGATGCTCTACTCCATAATAGAAAAACACATGGTATACTACACTTCTCAATTAATGCATCACACTTTGATGAAACCGACCCTGTTGCTCTTCCTTTTGGACTGGTATCATTTTTGTCATCAGGAAGGTATTTATATTCTTTCAAACTCTGTGAGAACGACCTGGGTAAAAATTTTGGGAAACTTGTCTTTCGCACTCTTCTTGATGCTTCATCTTGTTTATCTGTCCTTGATCTTTCTGAAAATAATATGGCAGGATGGCTCTCCAATTTTAATAGAAGATCTGTGACTGGCATTCGAGCATTTTCTATGGTTGGCAAGTCCTTGCAATCACTGCGTGTACTCAATTTAAGGGGAAACGAGCTGCGCAAAGATGATGCAGATAATCTAAGATATGCTTTGGCTCATATACCAAACTTAGAGTTCCTGGATATAAGTGATAATCCTATTGAGGATGATGGAATCAGGAATTTAGTTCCCTATTTCATTGAAGCTTCTGAAAGAAGCTTTCCCTTTGCTGATCTGCATTTAGCGAACTGTGAGCTTTCCTGTGATGGAGTCACACAACTCTTAAATGTGCTGTCAACTTTAAGGAAACCACTGAGGTCACTTTCTGTTGCAGATAATAGCCTTGGAAGCTCGGTAGCAGCAGCTTTGGGAGTTTTCTTGGGGAAATCAATTCAAATACTGAATGTTGAAGGCATTGGCTTGGGTCCATGTGGATTTCAGGATTTAATTGAAGGGTTAACTGAAGGGTCAAAAGTTGTGAACATCAATATAAGCAAAAATCGTGGTGGGATAGAGATAGCAAATTTTTTGTTGAAGCTCTTGCCTGGGGCATCAGATCTTGTTTCTGTCAATGCATCATACAATTTAATGCCTGTTGAATCCTTAGACATCATACGTTCTGCCCTGAAAATTGCTCAAGGTAATCTAGAGCTATTGGACTTGAGGGGAAATAATTGGGATGATCAAAAAAAGGCTGAAGATCCGTTGTTTGCGGAGTTTCAGAACAGTGCCAAGAAAATTTTAATTTTTTCATCATCGCCAACTTTAGATGGACTTTATGACGGTGATCCATAG 2367 40.81 MDESSGSNNGNHSVSLNIKDDSTADCVPVLFLQKLIAEVMGTYFLIFAGEASVLVNLNKDGVITFPGISIVWGLVVMVMIYSVGHISGAHFNPSVTIAFAITIRFPWKEVPAYLVAQVIGSTLASGTLRLIFNGTQDHFPGTLPKSHTHKRKIPPLTIGIYSSLWVFFFLVVAECRENAASATISSLPPYNSGVRLPPVTTPTLGDDVPPAIYDLPPHLLDALASHLPPLALQNLQSGMPFELQNEDEYDNDCLKGGRKRRRDCKFNLAWKKNFNLRWSKLTDAIQPDDWQQIYWERHLQSCLDEAAEIASLPSFSKCIGEIEMSDSILKYIASEGSVHFLCGKYRKLSYHCQQFGCYAQCLSLQSVLCLSEICHILRSCKLQTLVLRWIRFQEQVNGLCKLLNQNRETLTSLELIHCKLSSTSINSISDALLHNRKTHGILHFSINASHFDETDPVALPFGLVSFLSSGRYLYSFKLCENDLGKNFGKLVFRTLLDASSCLSVLDLSENNMAGWLSNFNRRSVTGIRAFSMVGKSLQSLRVLNLRGNELRKDDADNLRYALAHIPNLEFLDISDNPIEDDGIRNLVPYFIEASERSFPFADLHLANCELSCDGVTQLLNVLSTLRKPLRSLSVADNSLGSSVAAALGVFLGKSIQILNVEGIGLGPCGFQDLIEGLTEGSKVVNINISKNRGGIEIANFLLKLLPGASDLVSVNASYNLMPVESLDIIRSALKIAQGNLELLDLRGNNWDDQKKAEDPLFAEFQNSAKKILIFSSSPTLDGLYDGDP 788
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 66533860 66556968 + Hsped.03g12260.1 Hepe03g1226 566224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1226 788 PANTHER RNI-LIKE SUPERFAMILY PROTEIN 209 788 - -
Hepe03g1226 788 ProSitePatterns MIP family signature. 90 98 IPR022357 -
Hepe03g1226 788 Pfam Major intrinsic protein 30 139 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe03g1226 788 SUPERFAMILY RNI-like 370 753 - -
Hepe03g1226 788 PRINTS Major intrinsic protein family signature 109 128 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe03g1226 788 PRINTS Major intrinsic protein family signature 72 96 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe03g1226 788 PRINTS Major intrinsic protein family signature 33 52 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe03g1226 788 SMART LRR_RI_2 597 624 - -
Hepe03g1226 788 SMART LRR_RI_2 407 434 - -
Hepe03g1226 788 SMART LRR_RI_2 652 679 - -
Hepe03g1226 788 SMART LRR_RI_2 537 564 - -
Hepe03g1226 788 SMART LRR_RI_2 565 592 - -
Hepe03g1226 788 Gene3D Glycerol uptake facilitator protein. 10 184 IPR023271 -
Hepe03g1226 788 Gene3D Ribonuclease Inhibitor 520 592 IPR032675 -
Hepe03g1226 788 Gene3D Ribonuclease Inhibitor 593 783 IPR032675 -
Hepe03g1226 788 Gene3D Ribonuclease Inhibitor 283 519 IPR032675 -
Hepe03g1226 788 SUPERFAMILY Aquaporin-like 32 161 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1226 Hepe-Chr3:66533860 Hepe06g0439 Hepe-Chr6:23712439 4.43e-87 dispersed
Hepe03g1225 Hepe-Chr3:66523181 Hepe03g1226 Hepe-Chr3:66533860 2.96e-88 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1226 - - - 0.0