Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1264 ATGGCGATTCTCAAGCTTTTCCCTCTCTGTATTTCCTTCTTCTTATTGATCAGAGCTCCTGTACGAGGTGATTCCTTACATTTTCCTTCTTCTTCTTCTTCTTCTTCTTTTTCTTCTGATGTTCAGCTTCTTTTGGGAAAGATTAGAGCTTCACTTGAAGGTGAAGCTCAAAACTTGCTTTTATCTTCATGGAATTTCTCTTTGCCTATTTGTCAATGGAGAGGACTCAAATGGGTGTTCTCCAATGGAACTCCTTTGCTCTGCAGTGATTCTTCTTCTCCACAATGGTCTAATCTCACTCTCTTCAAAGACCCTTCTCTTCATGTTCTGTCTCTTCAACTTCCTTCTGCTAATCTCACTGGTTCTTTGCCTAAGGAGCTTGGTGAGTTCACTATGCTTCAAAGTCTTTATCTAAGCATTAACTCTTTGACTGGAACCATTCCTCTTGAACTTGGTTACAGTTCCTCTCTTTCTGACATTGATTTGAGTAGCAATCTCTTGACTGGAGCTTTTCCACCGTCGATCTGGAATTTGTGTGATAAACTTGTTTCTGTTAGATTTCATGGCAATTCATTATCTGGGTCTCTGCCTCAGCCAGCTCTACCAAATTCCACCTGCAAGAATTTGGAGGCTTTGGATTTGGGCAACAACCAGATTTCAGGCACTTTCCCGGAATTCATTACTAGGTTTCAGGGTCTGAAAGAGCTTGATCTTGGGAAGAATTTGTTGTCTGGACAAGTCCCTCAGAGTTTAGGTCAGTTAGAGCTGGAGAAGTTGAACCTTTCAAACAACAATTTCAGTGGAATATTGCCTGTTTTTGGTCACTCTAAGATTGGGGTTGAGGCTTTTGAAGGGAACAGTCCTGGACTTTGTGGGGAGCCTTTGAAAAGCTGTGTAGGACCTTCTCATTTGAGTTCAGGTGCCATTGCTGGCCTTGTTATCGGCTTGATGACTGGAACAGTGGTTTTAGCGTCATTGCTTATTGGTTATATGCAAAACAAGAAGAAGAAGAGTAGGAGTGAGAGTGAAGATGAGTTTGAGGAAGGAGATGATGAAGAAAATGGTGGCAGTGGTATTGGAGGCGGCACAGGCGGTGAAGGAAAGCTCATTTTGTTTCAGGGTGGTGAGCATTTGGCATTGGATGATGTCTTGAATGCTACAGGACAGGTTATGGAGAAAACAAGCTATGGCACTATTTATAAGGCAAAACTTGCTGATGGAGGTACCATTGCTCTGAGACTGCTGAGGGAAGGTAGTTGCAAAGACAGAAATTCTTGTTTGTCTGTGATTAAACAGTTGGGGAAGATTCGCCATGAGAATTTGATTCCTTTGAGAGCTTTCTATCAGGGAAAGAGAGGAGAGAAGCTTCTCATTTATGACTATCTGCCTATCAGAACTTTATATGATTTTCTACATGAGTCTAGAGCAGGAAAACCAGTGTTGAACTGGGCTAGGAGGCACAAGATTGCATTATGCATAGCCAGGGGACTAGCTCATCTTCACACAGGTCTTGAAGTCCCCATTACACATGGTAATGTAAGATCAAAAAATGTGCTTGTGGACGACTTCTTCGCAGCGAGACTGACGGAGTTCGGGCTCGACAAGCTAATGATCCCATCGGTAGCGGACGAAATCGTGTCGCTTGCAAAGTCGGACGGGTACAAGGCACCAGAGGTGCAAAGGATGAAGAAATGCAATTCAAGAACAGATGTGTATGCATTTGGAATCTTGCTATTGGAAATTCTGATTGGGAAGAAGCCAGGGAAAAGTGGAAGAAGTAGTGGTGGAGGAGAGTTTGTGGATTTGCCATCAATGGTGAAAGTGGCAGTTTTGGAGGAGACAACAATGGAGGTTTTTGATGTGGAGGTTTTGAAAGGGATTAGAAGTCCCATGGAAGATGGAGTTGTTCAAGCATTAAAGCTTGCAATGGGCTGCTGTGCTCCAGTGGCTTCAGTAAGACCTTCCATGGATGAAGTTGTGAAGCAATTGGAAGAGAACAGACCAAGAAACAGATCTGCTCTCTACAGTCCAACAGAAACAAGAAGTGAAATTGGTACTCCATTTTGA 2067 43.06 MAILKLFPLCISFFLLIRAPVRGDSLHFPSSSSSSSFSSDVQLLLGKIRASLEGEAQNLLLSSWNFSLPICQWRGLKWVFSNGTPLLCSDSSSPQWSNLTLFKDPSLHVLSLQLPSANLTGSLPKELGEFTMLQSLYLSINSLTGTIPLELGYSSSLSDIDLSSNLLTGAFPPSIWNLCDKLVSVRFHGNSLSGSLPQPALPNSTCKNLEALDLGNNQISGTFPEFITRFQGLKELDLGKNLLSGQVPQSLGQLELEKLNLSNNNFSGILPVFGHSKIGVEAFEGNSPGLCGEPLKSCVGPSHLSSGAIAGLVIGLMTGTVVLASLLIGYMQNKKKKSRSESEDEFEEGDDEENGGSGIGGGTGGEGKLILFQGGEHLALDDVLNATGQVMEKTSYGTIYKAKLADGGTIALRLLREGSCKDRNSCLSVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPIRTLYDFLHESRAGKPVLNWARRHKIALCIARGLAHLHTGLEVPITHGNVRSKNVLVDDFFAARLTEFGLDKLMIPSVADEIVSLAKSDGYKAPEVQRMKKCNSRTDVYAFGILLLEILIGKKPGKSGRSSGGGEFVDLPSMVKVAVLEETTMEVFDVEVLKGIRSPMEDGVVQALKLAMGCCAPVASVRPSMDEVVKQLEENRPRNRSALYSPTETRSEIGTPF 688
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 67892043 67894891 + Hsped.03g12640.1 Hepe03g1264 566262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1264 688 Pfam Protein tyrosine and serine/threonine kinase 389 663 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g1264 688 Gene3D Phosphorylase Kinase; domain 1 374 461 - -
Hepe03g1264 688 Pfam Leucine rich repeat 208 266 IPR001611 GO:0005515(InterPro)
Hepe03g1264 688 Gene3D Ribonuclease Inhibitor 39 202 IPR032675 -
Hepe03g1264 688 FunFam Leucine-rich repeat receptor-like protein kinase 206 298 - -
Hepe03g1264 688 MobiDBLite consensus disorder prediction 337 359 - -
Hepe03g1264 688 Gene3D Ribonuclease Inhibitor 203 300 IPR032675 -
Hepe03g1264 688 MobiDBLite consensus disorder prediction 669 688 - -
Hepe03g1264 688 MobiDBLite consensus disorder prediction 666 688 - -
Hepe03g1264 688 Gene3D Transferase(Phosphotransferase) domain 1 463 681 - -
Hepe03g1264 688 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 101 196 - -
Hepe03g1264 688 SUPERFAMILY Protein kinase-like (PK-like) 391 664 IPR011009 -
Hepe03g1264 688 ProSiteProfiles Protein kinase domain profile. 385 688 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g1264 688 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 110 670 IPR052451 -
Hepe03g1264 688 Pfam Leucine Rich Repeat 156 178 IPR001611 GO:0005515(InterPro)
Hepe03g1264 688 Pfam Leucine Rich Repeat 133 152 IPR001611 GO:0005515(InterPro)
Hepe03g1264 688 SUPERFAMILY L domain-like 56 273 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1264 Hepe-Chr3:67892043 Hepe05g0055 Hepe-Chr5:571051 8.55e-70 dispersed
Hepe03g1264 Hepe-Chr3:67892043 Hepe01g0674 Hepe-Chr1:68953899 6.62e-71 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72659 PF07714 PK_Tyr_Ser-Thr 7.30E-25 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1264 - - - 0.0