Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1337 ATGAACGATGAGGATATTCCTCAATTGGATTTTGACAAATTGGAGGTCGTAACGGCGCTCGGCCGAGGAGCCAAAGGAGTCGTGTTCTTGGCTCGAAATGCGGAGGACGACGACGGTGATGATGGAGAATGGCTTGCGTTGAAGGTCATTTCTAGAGCTTTGATCGAGAGGAAAGCTAACGATATTGTTAATCGAGATGATCAGTATCGGAGAGTTTGCTTTGAACGAGAAGTTTTGCGTCTGTTTCGTCATCCTCTTTTGCCCAGATTGCGAGGTGTTTTGGATACGCATAAAGTTGTTGGTTACGCCATTGATTATTGTAATGGACGAGATCTTAATTCTCTCAGGAAGAAACAAACCGAGAAGATGTTCTCCGATGATGTTATTAGATTTTACGCTGCGGAATTAGTTATGGCGTTGGAGTATGTACACAGCTTAGGAATAGTTTACAGAGATTTAAAGCCGGAGAATGTTATGGTTCAACACAACGGCCATGTAATGCTTGTTGATTTTGATCTCTCTACCAGACTTACTCAAAAATCATCTAAATCGTCTCCATCGCCGTCGCTTTTGGATGAGGTTTTGACGGCATCTAAATCGGCGATGAAGAAGAACAAGAAGAAGCGATTCTTTCATTTCCACAGATTCTGCAATTCCGGAGTATCTCCGGAGGATTCCAGTCAACAGGCGGGGGAGAAACCTAGATTGCCGCTGGAGTCGTCGGATTCGGACTCGTCGGAGAAGTCGAACTCGTTTGTAGGAACAGAGGAGTACGTAGCGCCGGAGATCGTCGCCGGGAAGGGCCATGAATTCGCCGTGGACTGGTGGTCACTCGGCGTGGTTCTGTACGAGATGCTGTACGGGACGACGCCGTTTAGAGGAGCGAATCGGAAGGAAACGTTTTACCGGATTTTGACGAAGGCACCGGATCTCTGCGGGGAAGCGACGCCGTTGAGGGATTTGATCAGGAAGTTGCTGGAGAAAGATCCGGTGAAGAGGATAGATCTTGATGAGATCAAAAGCCACGAGTTCTTCAAAGGAACTGATTGGGATTTGGTTCTGGAAATTCCCCGGCCGCCGTCGCTGCCTGAAATGGCCGGGGAGGACATAGATGGAAATAAGTTAATTGATGTGGAGTCTTTCGTCCAAGATATATTTTGCAGCGAAATGGAGAAGAAGAATCGTATTAACGATGAAGAAGGAAAACGATTTATTCCTAATTACACGGAGTCTGACAAATTTCTTGTATTCTGA 1254 46.33 MNDEDIPQLDFDKLEVVTALGRGAKGVVFLARNAEDDDGDDGEWLALKVISRALIERKANDIVNRDDQYRRVCFEREVLRLFRHPLLPRLRGVLDTHKVVGYAIDYCNGRDLNSLRKKQTEKMFSDDVIRFYAAELVMALEYVHSLGIVYRDLKPENVMVQHNGHVMLVDFDLSTRLTQKSSKSSPSPSLLDEVLTASKSAMKKNKKKRFFHFHRFCNSGVSPEDSSQQAGEKPRLPLESSDSDSSEKSNSFVGTEEYVAPEIVAGKGHEFAVDWWSLGVVLYEMLYGTTPFRGANRKETFYRILTKAPDLCGEATPLRDLIRKLLEKDPVKRIDLDEIKSHEFFKGTDWDLVLEIPRPPSLPEMAGEDIDGNKLIDVESFVQDIFCSEMEKKNRINDEEGKRFIPNYTESDKFLVF 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 69605927 69607424 - Hsped.03g13370.1 Hepe03g1337 566335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1337 417 Pfam Protein kinase domain 15 185 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g1337 417 Pfam Protein kinase domain 244 345 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g1337 417 SMART serkin_6 14 345 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g1337 417 FunFam Serine/threonine-protein kinase OXI1 247 364 - -
Hepe03g1337 417 Gene3D Transferase(Phosphotransferase) domain 1 111 183 - -
Hepe03g1337 417 MobiDBLite consensus disorder prediction 220 251 - -
Hepe03g1337 417 Gene3D Phosphorylase Kinase; domain 1 13 110 - -
Hepe03g1337 417 SUPERFAMILY Protein kinase-like (PK-like) 12 369 IPR011009 -
Hepe03g1337 417 PANTHER FLIPPASE KINASE 1-RELATED 8 368 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Hepe03g1337 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g1337 417 Gene3D Transferase(Phosphotransferase) domain 1 244 364 - -
Hepe03g1337 417 ProSiteProfiles Protein kinase domain profile. 14 345 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g1337 417 FunFam Serine/threonine-protein kinase OXI1 111 179 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1337 Hepe-Chr3:69605927 Hepe08g0109 Hepe-Chr8:909973 7.13e-89 dispersed
Hepe03g1337 Hepe-Chr3:69605927 Hepe04g1012 Hepe-Chr4:64757765 1.39e-63 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72663 PF00069 Pkinase 3.40E-29 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1337 K20714 - csv:101223223 610.142