Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1342 ATGGATGAGGATTTCGATATCCCTGCGGCGGCTGACATGAACGAGGAGTTGGGTCTTCCTGATGATATCGTTGCTCTCAAAGTTGGGGAGGAGAAAGAAATTGGAAATCAGGGCTTGAAGAAGAAGCTTTTGAAGGAAGGTGAAGGATGGGTCACTCCTGAAAATGGCGACGAGGTTGAAGTTCACTATACTGGGACTTTGCTTGATGGGACTCAGTTTGATTCCAGCCGTGATCGTGGAACCCCGTTTAAGTTCACTCTTGGTCAAGGACAAGTGATTAAAGGATGGGATCTGGGTATCAAAACAATGAAGAAAAGTGAAAAAGCTCTTTTAACCATTCCTCCTGAGCTGGCATATGGTGAATCTGGCTCCCCACCAACCATTCCTCCTAGTGCGACATTGCAGTTCGATGTTGAGTTACTATCTTGGTCAAGCGTTAGGGACATATGTAAGGATGGAGGAATATTCAAGAAGATCCTAACTGAAGGGGAAAAATGGGATAATCCAAAGGACCTTGATGAAGTGCTAGTTAATTTTGAAGCTAAGCTAGAAGATGGAACACTTGTTGCAAAAGCTGATGGAGTGGAATTCACCGTTGGGGACGGTTACTTTTGCCCTGCTCTCACAAAGGCTGTAAAAACCATGAAGATAGGTGAAAAGGCACTCCTCACGGTGAAACCACAATATGGTTTTGGGGAGAAAGGTAAATCAGCCTCTAGTAATGAAGGTGCAGTTCCACCAAATGCATCTCTCGATATTACTTTGGAGTTGGTATCTTGGAAGACTGTTTCAGAAGTTATCCCTGACAAAAAGGTCATCAAGAAAATCCTGAAAGAAGGAGAAGGGTATGAGAAGCCAAACGATGGAGCCGTTGTTAAAGTGAAATTGATTGGGAAGTTGGGAGATGGCAAGATATTTTTGAAGAAGGGACATAATGATGGTGAAGAGCCATTTGAGTTTAAAATAGACGAGGAACAAGTGATCGATGGCCTAGACAAAGCTGCGGCGACAATGAAGAAAGGTGAGACAGCCCTGCTGATAATAGCACCAGAGTATGCTTTTGGTTCGTCTGAGTCACAGCAGGAGTTAGCCGTTGTTCCTCCGAACTCGACTGTGTATTACGAAGTTGAGCTGGTGGCTTTTGACAAGGAGAAGGAATCATGGGATATGAATACACCGGAAAAGATTGAAGCCGCTGGTAAAAAGAAGGAAGAAGGAAATGTGTTGTTTAAGGCTGGAAAATTTGATAGAGCTTCCAAGAGATATGAGAAGGCTGTGAAGTTCATTGAATACGATTCTTCATTTAGCGAAGAAGAGAAAAAGGAAGCAAAGACATTGAAAGTTGCATGCAATTTGAACAATGCAGCTTGTAAATTGAAGCTAAAGCTGTACAACGAGGCAGAGAAATTGTGTACCAAGGTATTGGAACTCGAGAGTTCAAATGTTAAGGCTCTCTATAGAAGGGCTCAAGCATACATCCAATTAACTGATTTGGATTTGGCTGAACTCGACATTAAGAAAGCTCTCGATATCGATCCAAATAACAGGCACGTACCCTTCCTCCTTTTTTCTCCAATGCTCAATACTCACTCACATTGCTTATAG 1605 42.8 MDEDFDIPAAADMNEELGLPDDIVALKVGEEKEIGNQGLKKKLLKEGEGWVTPENGDEVEVHYTGTLLDGTQFDSSRDRGTPFKFTLGQGQVIKGWDLGIKTMKKSEKALLTIPPELAYGESGSPPTIPPSATLQFDVELLSWSSVRDICKDGGIFKKILTEGEKWDNPKDLDEVLVNFEAKLEDGTLVAKADGVEFTVGDGYFCPALTKAVKTMKIGEKALLTVKPQYGFGEKGKSASSNEGAVPPNASLDITLELVSWKTVSEVIPDKKVIKKILKEGEGYEKPNDGAVVKVKLIGKLGDGKIFLKKGHNDGEEPFEFKIDEEQVIDGLDKAAATMKKGETALLIIAPEYAFGSSESQQELAVVPPNSTVYYEVELVAFDKEKESWDMNTPEKIEAAGKKKEEGNVLFKAGKFDRASKRYEKAVKFIEYDSSFSEEEKKEAKTLKVACNLNNAACKLKLKLYNEAEKLCTKVLELESSNVKALYRRAQAYIQLTDLDLAELDIKKALDIDPNNRHVPFLLFSPMLNTHSHCL 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 69875572 69880110 - Hsped.03g13420.1 Hepe03g1342 566340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1342 534 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 56 144 IPR001179 GO:0003755(InterPro)
Hepe03g1342 534 FunFam Peptidylprolyl isomerase 29 147 - -
Hepe03g1342 534 SUPERFAMILY FKBP-like 32 147 - -
Hepe03g1342 534 Gene3D - 147 261 IPR046357 GO:0003755(InterPro)
Hepe03g1342 534 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 283 379 IPR001179 GO:0003755(InterPro)
Hepe03g1342 534 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 51 141 IPR001179 GO:0003755(InterPro)
Hepe03g1342 534 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 168 257 IPR001179 GO:0003755(InterPro)
Hepe03g1342 534 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 289 382 IPR001179 GO:0003755(InterPro)
Hepe03g1342 534 SUPERFAMILY FKBP-like 148 264 - -
Hepe03g1342 534 ProSiteProfiles TPR repeat profile. 482 515 IPR019734 GO:0005515(InterPro)
Hepe03g1342 534 Gene3D Tetratricopeptide repeat domain 385 522 IPR011990 GO:0005515(InterPro)
Hepe03g1342 534 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 172 261 IPR001179 GO:0003755(InterPro)
Hepe03g1342 534 FunFam Peptidylprolyl isomerase 387 523 - -
Hepe03g1342 534 SUPERFAMILY TPR-like 388 522 IPR011990 GO:0005515(InterPro)
Hepe03g1342 534 Gene3D - 28 146 IPR046357 GO:0003755(InterPro)
Hepe03g1342 534 FunFam Peptidylprolyl isomerase 148 261 - -
Hepe03g1342 534 Pfam Tetratricopeptide repeat 483 515 IPR019734 GO:0005515(InterPro)
Hepe03g1342 534 Gene3D - 262 383 IPR046357 GO:0003755(InterPro)
Hepe03g1342 534 SMART tpr_5 448 481 IPR019734 GO:0005515(InterPro)
Hepe03g1342 534 SMART tpr_5 399 432 IPR019734 GO:0005515(InterPro)
Hepe03g1342 534 SMART tpr_5 482 515 IPR019734 GO:0005515(InterPro)
Hepe03g1342 534 FunFam Peptidylprolyl isomerase 262 384 - -
Hepe03g1342 534 SUPERFAMILY FKBP-like 266 399 - -
Hepe03g1342 534 PANTHER PEPTIDYLPROLYL ISOMERASE 31 142 IPR050754 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1342 Hepe-Chr3:69875572 Hepe05g1310 Hepe-Chr5:61243821 7.62e-249 dispersed
Hepe03g1342 Hepe-Chr3:69875572 Hepe07g0230 Hepe-Chr7:2189483 8.19e-20 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1342 K09571 - csv:101214513 922.539