Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1378 ATGGGTGTTGGGAGCCGGAGGAGAGAGAAAAAGATGATTTGGAAGTGGACGGAGCTGGTTTCTCTCATCATTCTTTGCATTCTTGGGTTGAAGCCTACCTCCATTCAAGGAGCCACAGATCCAACAGATGCTTCTGCTTTAAGAGTTTTGTACACCAGCTTAAACTCGCCGTCTCAGTTAACCCAGTGGAACGCAAATGGCGATGATCCATGTGGACAATCATGGAAGGGGATTACTTGCTCTGGCTCACGGGTTACAGAAATAAACTTATCTGGCCTTGGGCTCAGTGGATCGCTCGGATATCAGCTCGCAAGTTTGACATCGGTAACCAACCTAGATGTGAGCAATAACAATATTGGAGGCGAGATAGTCTACCAACTTCCACCAAACCTACAGAGATTAAATCTTGCTCGAAACAACTTCAATAAAGGCCTCCCGTATTCCATTTCCTTGATGACTACTCTTCAATACTTAAATCTCAGTCATAATCAGCTTCAGGATGCATTGATTGATATGTTTGGGCAGCTTACTTCCCTATCCACATTGGATCTGTCTTTCAACTCTATGTCAGGCAACCTGCCTCAGAGTTTCAGCTCTCTTTCTAGCATCAGCACTATGTATTTGCAAAACAATCAGTTCACTGGCACAATTGATGTCCTCGCAAATCTTCCTCTTAATAACCTGAATGTTGAAAATAACCGTTTCACTGGCTGGATCCCTGAACCACTGAAAAACATCAATCTGCAGAAAGAAGGAAACTCCTGGAGCTCAGGTCCTGCACCCCCTCCTCCACCTGGTACACCACCAGCCACCAGAAGGAGCGGAAATCGCAATTCTGGTAGTCGTAGTCCATCAAATGGTGGTTCTAGTGAAGGTGGGAAATCAGGAATTAGTGGTGGTGGCATTGCAGGAATAATCATCTCCGTGCTTGTCGTTGGAGCTGTAGTAGCATTCTTCCTCATCAGGAGGAGATCCAAGAGATCACCTTCAGACATTGAAAAGCTCGACAATCAACCCCTGCAACCTCTTAATATGATTTCAGCACAAGAAATAAAACGGGAAGAGACTTCCTCCACATTTTATCCAACAACATTTGAGACTTCTGCTGCAATTAATCTTAAACCCCCACCTAGTGATCGTCATAAATCATTTGATGAAGACGACTTTGCAAAAAGACCAGTTGTCAAGAAGAAGGCTAGTGCAGCTCCTATTAATGTAAAGTCATATTCAATAGCAGACCTGCAAATAGCTACAGGCAGCTTCAATGTTGAAAATCTTCTTGGTGAGGGATCGTTTGGACGTGTTTATCGGGCTGAGTTTGATGATGGAAAGATTCTTGCCGTGAAAAAAATAAATTCGTCTGCAGTGCCTAGGGAATTATCTGAAGATTTCACTGACATTGTTTCAAAAGTCTCCCAGTTGCACCATCCCAATATAACTGAGCTCGTGGGTTATTGCTCAGAGCATGGCCAGCATTTGCTTGTGTATGAGTTCCATAAAAATGGCTCGCTTTATGACTTATTGCATCTATCAGATGAATACAACAAGCCACCGATATGGAATTCCCGTGTTAAGATTGCTTTGGGAACAGCACGTGCATTAGAGTATCTTCACGAAGTTTGCTCCCCATCAATTGTTCATAGAAACATGAAGTCCGCTAACATATTGCTGGATGCCGAACTCAGCCCTCACCTTTCTGATTCTGGACTGGAAAGCTTTACAGAAAATGCAGATCAGGCACTGGATCACAATGCAAGTTCGGGATACACTGCCCCCGAAGTTACCATGTCTGGCCAATATACTCTGAAAAGCGATGTCTACAGTTTTGGAGTAGTCATGTTGGAACTGCTCACTGGACGCAAACCATTCGATAGTTCAAGGGCGAGGGCGGAGCAATCTTTGGTTCGATGGGCTACACCTCAGCTTCATGACATTGATGCTTTGACCAAGATGGTTGATCCAGAACTCCAAGGGCTTTATCCAGTTAAATCCATCTCCCGATTTGCAGATGTGATTGCACTTTGTGTCCAGACCGAACCTGAGTTCAGACCTCCAATGTCGGAGGTGGTGGAAGCGTTGGTTCGTCTGGTGCAGCGAGCTAACATGAGTAAGAGAACGTTTGGAGCTGATAATGCAGCATCTCCAAGAGGGGACGGTGGGGAGGACACACCATAA 2175 44.83 MGVGSRRREKKMIWKWTELVSLIILCILGLKPTSIQGATDPTDASALRVLYTSLNSPSQLTQWNANGDDPCGQSWKGITCSGSRVTEINLSGLGLSGSLGYQLASLTSVTNLDVSNNNIGGEIVYQLPPNLQRLNLARNNFNKGLPYSISLMTTLQYLNLSHNQLQDALIDMFGQLTSLSTLDLSFNSMSGNLPQSFSSLSSISTMYLQNNQFTGTIDVLANLPLNNLNVENNRFTGWIPEPLKNINLQKEGNSWSSGPAPPPPPGTPPATRRSGNRNSGSRSPSNGGSSEGGKSGISGGGIAGIIISVLVVGAVVAFFLIRRRSKRSPSDIEKLDNQPLQPLNMISAQEIKREETSSTFYPTTFETSAAINLKPPPSDRHKSFDEDDFAKRPVVKKKASAAPINVKSYSIADLQIATGSFNVENLLGEGSFGRVYRAEFDDGKILAVKKINSSAVPRELSEDFTDIVSKVSQLHHPNITELVGYCSEHGQHLLVYEFHKNGSLYDLLHLSDEYNKPPIWNSRVKIALGTARALEYLHEVCSPSIVHRNMKSANILLDAELSPHLSDSGLESFTENADQALDHNASSGYTAPEVTMSGQYTLKSDVYSFGVVMLELLTGRKPFDSSRARAEQSLVRWATPQLHDIDALTKMVDPELQGLYPVKSISRFADVIALCVQTEPEFRPPMSEVVEALVRLVQRANMSKRTFGADNAASPRGDGGEDTP 724
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 70423070 70428447 + Hsped.03g13780.1 Hepe03g1378 566376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1378 724 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 499 707 - -
Hepe03g1378 724 ProSitePatterns Protein kinases ATP-binding region signature. 427 450 IPR017441 GO:0005524(InterPro)
Hepe03g1378 724 Gene3D Ribonuclease Inhibitor 40 263 IPR032675 -
Hepe03g1378 724 Pfam Protein tyrosine and serine/threonine kinase 423 693 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g1378 724 ProSiteProfiles Protein kinase domain profile. 421 696 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g1378 724 SUPERFAMILY Protein kinase-like (PK-like) 403 693 IPR011009 -
Hepe03g1378 724 PANTHER LEUCINE RICH REPEAT KINASE 2 302 695 IPR051420 -
Hepe03g1378 724 Pfam Leucine rich repeat N-terminal domain 41 81 IPR013210 -
Hepe03g1378 724 Gene3D Transferase(Phosphotransferase) domain 1 500 714 - -
Hepe03g1378 724 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 385 498 - -
Hepe03g1378 724 Pfam Leucine rich repeat 154 213 IPR001611 GO:0005515(InterPro)
Hepe03g1378 724 MobiDBLite consensus disorder prediction 249 295 - -
Hepe03g1378 724 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 40 266 - -
Hepe03g1378 724 Pfam Leucine Rich Repeat 130 150 IPR001611 GO:0005515(InterPro)
Hepe03g1378 724 CDD STKc_IRAK 427 696 - -
Hepe03g1378 724 SUPERFAMILY L domain-like 39 245 - -
Hepe03g1378 724 Pfam Leucine Rich repeat 107 124 IPR001611 GO:0005515(InterPro)
Hepe03g1378 724 MobiDBLite consensus disorder prediction 271 293 - -
Hepe03g1378 724 Gene3D Phosphorylase Kinase; domain 1 386 498 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2146 Hepe-Chr2:57961275 Hepe03g1378 Hepe-Chr3:70423070 4.86e-150 dispersed
Hepe03g1378 Hepe-Chr3:70423070 Hepe07g1580 Hepe-Chr7:54699284 1.99e-145 dispersed
Hepe08g2166 Hepe-Chr8:60927206 Hepe03g1378 Hepe-Chr3:70423070 1.42e-13 dispersed
Hepe02g1584 Hepe-Chr2:21031314 Hepe03g1378 Hepe-Chr3:70423070 9.06e-269 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72664 PF07714 PK_Tyr_Ser-Thr 1.50E-42 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1378 - - - 0.0