Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1387 ATGTGGTGGAGATCAGCCTCTTTCATCCTCGACAAGCAGCAATCTGAAGGCGTTTCAAAGCCTCCCGAAACCCTTTCTATCTCCCCACCCGCCCAATCTTCTATGGCGGACACATTCCAGAACCCTAACCCTAAAATCTCTGCATATTACCAAAGTAGAGCTGCCCACACCGCCGTCGTCACTAGTGATTGGCTCGCCCAGGCGCAGGCTGCTGTCGGATTTCAAACCGACGACCAATTGTTGTCGGAAACTGATGTCGGGGACTCTGAATCCGGCAAGCCGTTCTGTGTGATCGATGAGTTTAATAACTGGAGGAAACAGCCGGATTTGGCCGAGGCCGTTGCAGCTATTCGAGCTTTGGCGTCTGTAATACGGTCTAGTCAGGCCACGACTATGATGGAGCTCGAAATTGAGCTGAAAAAGGCTTCGGACTCTCTAAAGTCGTGGGATACAACTTCGATATCATTAACAGCTGGCTGTGATCTGTTCATGCGGTATGTAACTCGAACATCTGCTTTAGAATATGAGGACTTCAAGTCTGCTAAGTCTCGGTTGATTGAACGTGCAGAAAAGTTTGGGGAGATATCTTGTAAGGCACGGAGAATTATTGCAATGCTTAGTCAGGATTTCATTTTTGATGGTTGTACCATTTTGGTCCATGGTTTCTCCAGAGTTGTTATGGAAGTTCTGAAGTTGGCTGCACAAAATAAGAAGCTCTTTAGAGTGTTTTGCACAGAAGGAAGACCAGACAGGACAGGTTTGCGTTTATCCAATGAGCTAGCTAAACTTGATGTCCCTGTAAAGCTCCTAATTGACTCAGCAGTAGCGTATACGATGGACGAGGTTGATATGGTTCTAGTTGGGGCCGATGGAGTAGTTGAAAGTGGAGGTATAATCAACATGATGGGCACTTATCAAATTGCATTAGTGGCACATAGCATGAACAAACCGGTGTATGTGGCTGCTGAGAGTTATAAGTTTGCTCGACTCTACCCATTGGATCAGAAAGACATGGCCCCTGCTCTGCGTCCCATCGATTTCGGGGTTCCTATCCCATCCAAGGTTGAAGTTGAAAAATCTGCTCGAGATTATACTCCTCCTCAGTACCTTACTCTTCTCTTTACAGATTTGGGCGTTCTCTCTCCATCTGTGGTGAGTGACGAGCTCATTCAACTATATTTATAG 1185 46.41 MWWRSASFILDKQQSEGVSKPPETLSISPPAQSSMADTFQNPNPKISAYYQSRAAHTAVVTSDWLAQAQAAVGFQTDDQLLSETDVGDSESGKPFCVIDEFNNWRKQPDLAEAVAAIRALASVIRSSQATTMMELEIELKKASDSLKSWDTTSISLTAGCDLFMRYVTRTSALEYEDFKSAKSRLIERAEKFGEISCKARRIIAMLSQDFIFDGCTILVHGFSRVVMEVLKLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVAYTMDEVDMVLVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDMAPALRPIDFGVPIPSKVEVEKSARDYTPPQYLTLLFTDLGVLSPSVVSDELIQLYL 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 70515634 70520166 + Hsped.03g13870.1 Hepe03g1387 566385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1387 394 FunFam Translation initiation factor eIF-2B subunit alpha 198 394 - -
Hepe03g1387 394 FunFam Translation initiation factor eIF-2B subunit alpha 93 195 - -
Hepe03g1387 394 Gene3D - 95 195 IPR042528 -
Hepe03g1387 394 MobiDBLite consensus disorder prediction 13 38 - -
Hepe03g1387 394 Pfam Initiation factor 2 subunit family 107 382 IPR000649 GO:0044237(InterPro)
Hepe03g1387 394 SUPERFAMILY NagB/RpiA/CoA transferase-like 110 393 IPR037171 -
Hepe03g1387 394 Coils Coil 132 152 - -
Hepe03g1387 394 Gene3D - 198 394 IPR042529 -
Hepe03g1387 394 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 92 394 IPR051501 GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0006413(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1387 K03239 - csv:101211420 734.561