Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1424 ATGGCTTTCAAAAAGTACTTTTCTTTGAAGTACTTGTTACCCAGTTGTTTGCAGTTGCAGCCAAAGAAACTCCTAACAGGCCCTGGAATTCAACCTTCAAACAAAATCTCTTTGAGAAGAATCTTATCTCTTTCTGATATGAGTGTTAGATCATCTCTTTCAGTTATCAGTGATCTTTCAAACTCTTGTAATGGTTCAAATCTTCAAATTTTCACCTTCAAAGAAGTTATAAACTTCACTCAAAACTTCAACAAAAGCAATTATTTGGGGGAGGGGGGATTTGGGCCAGTGTTTAAAGGGTTTATTGATGAGAATTTCAAGCCTGGTTTGAAGTCAAAACAAGTAGCTGTTAAGATTTTGGATTTGGATGGCTCTCAAGGCCATAGGGAGTGGCTGGCTGAAGTGTTCTTTCTTGGGCAATTGAGACATCCAAATCTTGTTAATTTGATTGGGTATTGCCTTGAAGATGAGCAGAGACTTCTTGTTTATGAATATATGGAAGGTGGAAACTTGGAGAATCTGCTGTTTAAAGGTTGTTATGTTTCAAATTTGTCATGGTTACAAAGGATGAAGATTGCATTAGGATCAGCAATAGGCCTTGCTTTCCTCCACGACGCGGAAAAACCGATCATTTTCCGAGATTTTAAGGCTTCGAACATCTTACTCGACTCGGACTACAATCCCAAGCTTTCAGATTTCGGGTTGGCCACGAACGGTCCCGACGAAGACGATACACACATCACGACCCGAATCATGGGGACCGAAGGCTATGCAGCCCCAGAATACATCATGACAGGTCATTTGTCAACAATGAGTGATGTGTTTAGCTTTGGAGTGTTTTTATTAGAGTTGCTAACCGGTCGACGAGCGGTGGACAAGAGCCGCCCGAGCCGAGAACAGAATTTGGTAGCTTGGGGGAGACATCTGTTGAAAGATCCCCACAAACTTGAGAAGATAATTGATCCAAGGCTTGAAGGGCAGTACTCAAATGAAGGGGCTAAAAAATTGGCTGCAATAACTTACCAATGCCTTAGCCACCACCCCAAATGTAGGCCCTCAATGGCCTCAGTGGTGAAAGATTTGGAGGCTGTCCTTAACATGAAAGAGTTTCTAACTCAGCCATTTGTGTATATTGTCCCAAGTGAAGGGACCAAAAAGCAAGATGATGTAGAGAAGAATATGAACAAAGAGGTGGAGATGGAGGAGAAGAGACCGGAGAGCCGTTACCGGGACCAAAAAGGTCGCCGGGATAGGCCTTGGGTACCGTCGTCAAGGTCAAGGTCGAGATCGAGAGCTGGTGCTGTTCATTCTGATACAGCATTGTACAAGACTCTTGGAAGAACTTTTTACACTTCAAAACAGGCTGCTGCTGTTGTGTCTGCTTTGGTGAAAAGCACTTGA 1401 43.11 MAFKKYFSLKYLLPSCLQLQPKKLLTGPGIQPSNKISLRRILSLSDMSVRSSLSVISDLSNSCNGSNLQIFTFKEVINFTQNFNKSNYLGEGGFGPVFKGFIDENFKPGLKSKQVAVKILDLDGSQGHREWLAEVFFLGQLRHPNLVNLIGYCLEDEQRLLVYEYMEGGNLENLLFKGCYVSNLSWLQRMKIALGSAIGLAFLHDAEKPIIFRDFKASNILLDSDYNPKLSDFGLATNGPDEDDTHITTRIMGTEGYAAPEYIMTGHLSTMSDVFSFGVFLLELLTGRRAVDKSRPSREQNLVAWGRHLLKDPHKLEKIIDPRLEGQYSNEGAKKLAAITYQCLSHHPKCRPSMASVVKDLEAVLNMKEFLTQPFVYIVPSEGTKKQDDVEKNMNKEVEMEEKRPESRYRDQKGRRDRPWVPSSRSRSRSRAGAVHSDTALYKTLGRTFYTSKQAAAVVSALVKST 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 71004565 71006620 - Hsped.03g14240.1 Hepe03g1424 566422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1424 466 CDD STKc_IRAK 89 362 - -
Hepe03g1424 466 MobiDBLite consensus disorder prediction 386 424 - -
Hepe03g1424 466 FunFam Serine/threonine-protein kinase BIK1 50 165 - -
Hepe03g1424 466 Gene3D Transferase(Phosphotransferase) domain 1 166 374 - -
Hepe03g1424 466 SUPERFAMILY Protein kinase-like (PK-like) 60 362 IPR011009 -
Hepe03g1424 466 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 166 373 - -
Hepe03g1424 466 ProSiteProfiles Protein kinase domain profile. 83 376 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g1424 466 PANTHER OS01G0588500 PROTEIN-RELATED 59 365 IPR050823 -
Hepe03g1424 466 Gene3D Phosphorylase Kinase; domain 1 54 165 - -
Hepe03g1424 466 MobiDBLite consensus disorder prediction 386 436 - -
Hepe03g1424 466 Pfam Protein tyrosine and serine/threonine kinase 86 361 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1424 Hepe-Chr3:71004565 Hepe05g0004 Hepe-Chr5:122965 2.28e-128 dispersed
Hepe01g1923 Hepe-Chr1:84073122 Hepe03g1424 Hepe-Chr3:71004565 3.94e-132 wgd
Hepe03g1424 Hepe-Chr3:71004565 Hepe08g2697 Hepe-Chr8:68978204 8.50e-150 wgd
Hepe03g1424 Hepe-Chr3:71004565 Hepe09g0931 Hepe-Chr9:9415061 4.71e-152 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72665 PF07714 PK_Tyr_Ser-Thr 1.30E-43 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1424 - - - 0.0