Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1443 ATGAATTTAGGTGCGGCGGAGGAGGAATCGCCGCAGGAGATTCATATTCCGGCCGAAATCGATTGGCAAATGCTCGATAAATCTAAATTCTTCTTTCTCGGTGCAGCGTTGTTTTCAGGTGTTTCCGCTTCTCTTTACCCTATGGTGGTGTTGAAAACTCGGCAACAAGTTGCTCATTCGCAGCTTTCTTGCATCAGAACTGCGTTTTCGCTCGTCGGCCATGAAGGTTTTCGAGCTCTTTACAGAGGATTTGGGACTTCTCTGATGGGGACGATCCCTGCTAGAGCTCTGTACATGGGAGCTCTTGAAGTTACGAAGAGCTATGTCGGAACTGCAACTGTTAGAGTTGGATTTCCAGAGGCGACTGCAGCTACCATTGCTAATGCAGCTGCTGGATTGAGTGCTGCAATGGCAGCTCAGCTCGTTTGGACTCCTGTTGATGTTGTGAGTCAGAGACTCATGGTTCAAAGTAGGTACAATATTCCGAATGCATCGTCGTCGACTCATTACGTCAATGGGATCGATGCGTTTCGGAAAATCCTCAACACTGATGGTCTTCGAGGCCTCTACCGTGGTTTCGGGATATCGATTTTGACCTATGCGCCGTCGAATGCCATGTGGTGGGCTTCTTATTATGTATCGCAGCGGCTGGTTTGGGGCGGAATTGGATGCTATTATGCTAAGAAGGTTGATGAAGGGAATGAAAATGGAGCTAATAATAATGTTTACAGACCCGATTCGAAGACGGTGATCGCGGTTCAGGGTGCAAGCGCAGCGATGGCGGGTAGTATCTCGGCTTTGATAACAATGCCTCTTGATACAATCAAGACTAGATTGCAAGTTTTGGATGGGGATGAAAATGGTAGACGGGGGCCAACCATTGGACAGACGTTGAGAAATTTGGTGAGGGAAGGCGGCTGGACGGCGTGTTACCGAGGTTTGGCGCCCCGGTGCGCGTCGATGTCGATGTCTGCAACGACAATGATCACTACATATGAGCTTCTCAAACGGCTATCAACCAAGAATCAAGAGGGTTTAACAAGCTAA 1047 48.52 MNLGAAEEESPQEIHIPAEIDWQMLDKSKFFFLGAALFSGVSASLYPMVVLKTRQQVAHSQLSCIRTAFSLVGHEGFRALYRGFGTSLMGTIPARALYMGALEVTKSYVGTATVRVGFPEATAATIANAAAGLSAAMAAQLVWTPVDVVSQRLMVQSRYNIPNASSSTHYVNGIDAFRKILNTDGLRGLYRGFGISILTYAPSNAMWWASYYVSQRLVWGGIGCYYAKKVDEGNENGANNNVYRPDSKTVIAVQGASAAMAGSISALITMPLDTIKTRLQVLDGDENGRRGPTIGQTLRNLVREGGWTACYRGLAPRCASMSMSATTMITTYELLKRLSTKNQEGLTS 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 71193598 71195357 - Hsped.03g14430.1 Hepe03g1443 566441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1443 348 Gene3D Mitochondrial carrier domain 30 346 IPR023395 -
Hepe03g1443 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 8 344 - -
Hepe03g1443 348 Pfam Mitochondrial carrier protein 253 341 IPR018108 -
Hepe03g1443 348 Pfam Mitochondrial carrier protein 36 110 IPR018108 -
Hepe03g1443 348 Pfam Mitochondrial carrier protein 125 218 IPR018108 -
Hepe03g1443 348 SUPERFAMILY Mitochondrial carrier 23 335 IPR023395 -
Hepe03g1443 348 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085(InterPro)
Hepe03g1443 348 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085(InterPro)
Hepe03g1443 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Hepe03g1443 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 217 IPR018108 -
Hepe03g1443 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 338 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3214 Hepe-Chr2:81683422 Hepe03g1443 Hepe-Chr3:71193598 1.06e-83 dispersed
Hepe03g1443 Hepe-Chr3:71193598 Hepe05g1353 Hepe-Chr5:61943097 1.36e-68 dispersed
Hepe01g1906 Hepe-Chr1:83884488 Hepe03g1443 Hepe-Chr3:71193598 9.15e-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1443 K15121 - csv:101210602 601.668