Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1453 ATGAAGATGAAAATGGAGTCGATGAGACGGGGAAGAATAAGGGAGAGGATCCGCCGAAGCCAACTCTATACATTCGCTTGCATCCGGACAGACAGCGTGCGTGAGGCTGACGATTCGAATCCTTTAACAGGACCTGGTTTCTCACGAACTGTCTTTTGTAACCAACCTGAAACCCATGAGAGGAAGCCATTGAGATACTGCACGAATTACATATCAACAACGAAGTATAATGTTCTTACTTTTGTGCCTAAGGCTCTCTTTGAGCAATTCCGGAGGGTTGCCAATTTGTACTTTCTTTTGGCTGCATTGTTATCGCTCACACCAGTTGCCCCATTTTCTGCCATGAGCATGATTGCTCCTCTGGTATTTGTTGTTGGGCTCAGTATGGCTAAAGAAGCTCTCGAGGACTGGCGTCGATTTGTGCAGGATATGAAGGTTAATCTCAGGAAAGTGTGTGTCCATAAAGGTGAAGGTGTTTTTGGTTATAGACCTTGGCACAAGCTTCGAGTTGGAGATATATTGAAAATAGAGAAGGATCAGTTCTTTCCAGCCGATCTGCTTCTCTTGTCGTCGTGCTATGAGGATGGTATATGTTATGTGGAAACGATGAATTTGGATGGTGAGACTAATCTCAAAGTAAAGAGATCTTTGGAAGTAACCTTACCATTGGATGATGATGCAACTTTCAAAGATTTTACTGGAAAAATTTACTGTGAAGATCCGAACCCAAATCTCTACACCTTTGTAGGAAACTTTGAGTATGATCGGCAGATTTATCCTCTTGATCCTAATCAGATTCTCCTCAGAGATTCAAAATTGAGGAATACAGCTTATGCCTATGGGGTGGTGGTATTTACTGGACATGATAGCAAAGTCATGCAGAATGCTACAAAATCTCCTTCGAAAAGAAGTAGAATAGAGAGAAAAATGGACAAAATTATTTACATCCTTTTTACTCTCCTTATATTGATCTCATCAATGAGCTCAATCGGTTTTGCTGTGAAGACAAAGTACCAAATGATAGACTGGTGGTATTTACAAACTACTGGTGATGATCCACTGTATAACCCTCATAAGCCAACCTTATCAGGGCTCATACATTTAATCACTGCTCTTATACTTTATGGATATTTGATACCCATCTCGCTATATGTTTCCATCGAGGTTGTTAAGGTTCTGCAAGCTTCCTTCATTAACCAAGATATTAACATGTATTGCGAAGACACTGGCAATACAGCTCGAGCTCGAACTTCGAATTTGAACGAGGAGTTGGGCCAGGTAGACACAATCCTGTCTGACAAAACGGGCACATTGACTTGCAATCAGATGGACTTTCTGAAATGTTCCATTGCTGGCACTGCATATGGTGTCAAATCTAGTGAGGTTGAACTTGCAGCTGCAAGGCAGATGGCATTTGACCTTGAGGAGCAGGATGCAGAATATTCCGATGTACCTGTGCAAAAAAATAGCCGACAGCCCTCCATGCCAAATGGCCGAAAAGGGTCCGAGATCGAACTGGAGACTGTTGTTACTTCAAGTGATGTCAAGGATCAGAAGTCTGCCATAAAGTATTTTAGTTTTGAGGACAGCCGACTAACAGGTGGAAACTGGTTGAATGAGCCCCATCATGATGCTCTTCTATTATTCTTCCGAATTTTAGGAATTTGTCACACTGCAATTCCTGAGCTGAATGAGGAGACTGGAGTTTATACATATGAGGCAGAGTCCCCCGATGAAGGCGCTTTTCTCGTTGCAGCAAGAGAGTTTGGTTTTGAATTTTGTAAGAGAACACAATCAACCTGTGTTGTCCGTGAAAGATATCCTTCACCTAGCCAAATAGTTGAAAGGGAATACAAAATTTTGAATCTTTTGGATTTCACTAGCAAGAGAAAGAGAATGTCTGTAATTATTAGGGGTGAGGATGGCCAGATTATTCTTCTCTGCAAAGGTGCTGATAGCATCATCTTTGAACGATTAGCAAAGAACGGAAGAACATTTGAGGAATCAACCACAAGGCATTTGAATGAATATGGAGAAGCTGGGCTGCGTACCCTGGCACTTGCTTATAGGAAGCTAGAGGAGGCCGAATACACAGCTTGGAACAATGAGTTTCAGAAGGCTAAGACATCCATTGGAGGTGATAGAGATGCAATGCTCGAGCGAGTGTCCGACCTCATGGAGCGAGAATTAACCCTTGTTGGTGCTACTGCTGTGGAGGACAAGTTACAGAATGGGGTGCCCCAATGCATAGACAAACTTGCACAAGCTGGTCTTAAGATCTGGGTTCTAACAGGAGATAAGATGGAAACTGCCATCAACATAGGATATGCTTGTAGTTTACTACGACAGGGAATGAAGCGGATCTGCATATCAACAAGCTCAGATTCCTTACCACCACAGGATGGCAAAGAGGATTCTTTGTTTTTCGTTACAACACAGGCCATGAAAGACAATATTTTGAATCAAATCACCAATGCCGCTCAAATGATCAAGCTGGAGAAGGATCCACATGCCGCATTTGCTTTAATCATTGATGGGAAGACTCTAACCTATGCTCTCGAAGATGATATGAAGCTTCAATTCCTCGGACTCGCTGTTGATTGTGCATCAGTCATTTGCTGTCGTGTCTCCCCAAGGCAGAAGGCACTGGTAACAAGGTTAGTGAAAGAAGGTACTGGGAAAACCACTTTAGCAATTGGTGATGGTGCAAACGATGTAGGAATGATTCAAGAGGCCGATATTGGTGTCGGGATCAGTGGGGTTGAAGGTATGCAGGCTGTGATGGCTAGTGACTTCTCTATTGCTCAATTTCGGTTTCTGGAAAGGCTTCTGGTTGTCCATGGTCATTGGTGCTACAAGAGAATAGCACAAATGATTTGCTATTTCTTTTACAAGAATATTGCATTCGGATTAACGCTGTTCTACTTCGAAGCATATGCGGGATTTTCCGGGCAATCAATTTACGATGATTTCTACATGCTATCATTTAATGTCATACTTACCTCATTGCCTGTAATTTCCCTTGGAGTTTTTGAGCAGGATGTCTCTTCTGAGGTGTGCCTACAGTTCCCTGCACTGTATCAGCAAGGACCACAAAACTTGTTCTTTGACTGGCCTCGAATTTTCGGATGGATGGGGAATGCTGTCTACTCCTCTGTAGTTACTTTCTTCCTCAATCTCATCATCTTCTACGACCAGGCATTCCGCTCGGGCGGCCAAACTGCCGATATGAATGCTGTAGGAACCACGATGTTTACTTGCATCATATGGGCAGTAAATTGCCAGATTGCCCTCACAATGAGCCATTTCACCTGGATTCAACACCTTCTCGTCTGGGGTAGTATCGCCATGTGGTATTTGTTCATCTTACTCTATGGAATGATCATATCCTCTGGGAGTGCATATAAAATCTTCATTGAAGCACTAGGTCCTGCCCCTGTTTACTGGATAGCCACCATTTTAGTAACAATTACCTGCAATCTCCCATATCTTGCCCACATATCCTTCCAGAGAAGCTTCCATCCAATGGATCATCACATTATCCAAGAAATTAAACACTATAGAAAGGATGTTGAAGATACTCACATGTGGACCAGGGAAAGATCAAAAGCAAGGCAAAAGACCAAGATAGGATTCACAGCCAGAGTAGAAGCAAAAATCAGGCAGTTGAAAGGAAGGCTTCAAAAGAAGCATTCTTCCCTGGGCATGCCTCCAAATTCATGA 3723 42.81 MKMKMESMRRGRIRERIRRSQLYTFACIRTDSVREADDSNPLTGPGFSRTVFCNQPETHERKPLRYCTNYISTTKYNVLTFVPKALFEQFRRVANLYFLLAALLSLTPVAPFSAMSMIAPLVFVVGLSMAKEALEDWRRFVQDMKVNLRKVCVHKGEGVFGYRPWHKLRVGDILKIEKDQFFPADLLLLSSCYEDGICYVETMNLDGETNLKVKRSLEVTLPLDDDATFKDFTGKIYCEDPNPNLYTFVGNFEYDRQIYPLDPNQILLRDSKLRNTAYAYGVVVFTGHDSKVMQNATKSPSKRSRIERKMDKIIYILFTLLILISSMSSIGFAVKTKYQMIDWWYLQTTGDDPLYNPHKPTLSGLIHLITALILYGYLIPISLYVSIEVVKVLQASFINQDINMYCEDTGNTARARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVKSSEVELAAARQMAFDLEEQDAEYSDVPVQKNSRQPSMPNGRKGSEIELETVVTSSDVKDQKSAIKYFSFEDSRLTGGNWLNEPHHDALLLFFRILGICHTAIPELNEETGVYTYEAESPDEGAFLVAAREFGFEFCKRTQSTCVVRERYPSPSQIVEREYKILNLLDFTSKRKRMSVIIRGEDGQIILLCKGADSIIFERLAKNGRTFEESTTRHLNEYGEAGLRTLALAYRKLEEAEYTAWNNEFQKAKTSIGGDRDAMLERVSDLMERELTLVGATAVEDKLQNGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKRICISTSSDSLPPQDGKEDSLFFVTTQAMKDNILNQITNAAQMIKLEKDPHAAFALIIDGKTLTYALEDDMKLQFLGLAVDCASVICCRVSPRQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAYAGFSGQSIYDDFYMLSFNVILTSLPVISLGVFEQDVSSEVCLQFPALYQQGPQNLFFDWPRIFGWMGNAVYSSVVTFFLNLIIFYDQAFRSGGQTADMNAVGTTMFTCIIWAVNCQIALTMSHFTWIQHLLVWGSIAMWYLFILLYGMIISSGSAYKIFIEALGPAPVYWIATILVTITCNLPYLAHISFQRSFHPMDHHIIQEIKHYRKDVEDTHMWTRERSKARQKTKIGFTARVEAKIRQLKGRLQKKHSSLGMPPNS 1240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 71293539 71299659 - Hsped.03g14530.1 Hepe03g1453 566451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1453 1240 SUPERFAMILY Calcium ATPase, transmembrane domain M 60 1171 IPR023298 -
Hepe03g1453 1240 ProSitePatterns E1-E2 ATPases phosphorylation site. 433 439 IPR018303 -
Hepe03g1453 1240 SUPERFAMILY Calcium ATPase, transduction domain A 153 296 IPR008250 -
Hepe03g1453 1240 Coils Coil 457 477 - -
Hepe03g1453 1240 Pfam Phospholipid-translocating ATPase N-terminal 51 118 IPR032631 -
Hepe03g1453 1240 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 532 695 IPR023299 GO:0000166(InterPro)
Hepe03g1453 1240 SFLD C1.7: P-type atpase like 415 950 - -
Hepe03g1453 1240 MobiDBLite consensus disorder prediction 482 502 - -
Hepe03g1453 1240 CDD P-type_ATPase_APLT_Dnf-like 69 1058 - -
Hepe03g1453 1240 PRINTS P-type cation-transporting ATPase superfamily signature 899 918 - -
Hepe03g1453 1240 PRINTS P-type cation-transporting ATPase superfamily signature 431 445 - -
Hepe03g1453 1240 Gene3D - 598 733 IPR023299 GO:0000166(InterPro)
Hepe03g1453 1240 Gene3D - 443 479 IPR023299 GO:0000166(InterPro)
Hepe03g1453 1240 Pfam Cation transport ATPase (P-type) 555 659 - -
Hepe03g1453 1240 SFLD p-type atpase 415 950 IPR044492 -
Hepe03g1453 1240 FunFam Phospholipid-transporting ATPase 600 731 - -
Hepe03g1453 1240 NCBIfam phospholipid-translocating P-type ATPase 66 1183 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Hepe03g1453 1240 MobiDBLite consensus disorder prediction 483 497 - -
Hepe03g1453 1240 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 45 1195 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Hepe03g1453 1240 Gene3D - 428 442 IPR023214 -
Hepe03g1453 1240 FunFam Phospholipid-transporting ATPase 733 939 - -
Hepe03g1453 1240 Gene3D - 734 939 IPR023214 -
Hepe03g1453 1240 NCBIfam HAD-IC family P-type ATPase 871 980 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe03g1453 1240 FunFam Phospholipid-transporting ATPase 127 297 - -
Hepe03g1453 1240 Pfam Phospholipid-translocating P-type ATPase C-terminal 927 1175 IPR032630 -
Hepe03g1453 1240 Gene3D - 126 299 - -
Hepe03g1453 1240 SUPERFAMILY HAD-like 419 943 IPR036412 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1453 Hepe-Chr3:71293539 Hepe10g1852 Hepe-Chr10:55234707 0.0 dispersed
Hepe03g1453 Hepe-Chr3:71293539 Hepe02g2152 Hepe-Chr2:58261726 0.0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1453 K01530 - csv:101221220 2273.43