Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe03g1460 | ATGAGCACCGTCTCCCACCACCACCACCACCACCTCTCCAAATCCACCACCACCTCCGCCGCCGTCTCAACCACCACCACCACCACCACCACCACTCAAGCCTGCGCCGCCTGCAAGTATCAACGCCGCAAGTGCGCTCCCGATTGCATCCTCGCCCCTTACTTCCCTCACGATCGCCAACGCCAATTCCTCAACGCTCACAAACTCTTCGGCGTTAGCAACATCACCAAGATCATTAAGAATCTCGATCCGTTCGAGAAAGAAGAAGCGATGCGGACGATCATCTTCCAATCCGATGTCCGATCGCTCGATCCCGTCGGTGGATGCTACCGCATCATCCGTGACCTACAGCGCCAGATCGAGTACAGCAAGGCTGAGCTCGAGATTGTGCTTCATCAATTGGCGATCTGTAAGCAGCAGCAGGCCGCCGCTGCGATTCTGGAGGCGGATCCGATGAGTGGATACGGCGGAATTGAGCATCAATTTGTGGAGGGATACGACGGGGAAGGGTTTGTAGTTGGAGAAAATGAAAATGGAGAGAGTTTGGATGAGGAAGTTGAAGTTTGGGGAATTCAGGATTCGGGAATGTCGTCGTGTTCGTCGTTGCAATTGAAACAGGGCGGCGGCGGCTCTGTTCATGATTTTGATGATATCAAAATTGATACTCACCATCACCATCACCATCATCATCAAATTCAACAACAACAGCTTCTTAAGTTTCAACAGGATGATCATGATTTAGTTCATCAGAGTGAAGAAGCTATGCTGAAGATGGACAATGTGATGTTGAAAGAAGACACAGACCCAATACAACAAGCTCAAGAACAAGAGCTTAAAGGCTCAGTAGACACTTTATTTACCTTCCCAATTTGTGATACTTAG | 882 | 49.77 | MSTVSHHHHHHLSKSTTTSAAVSTTTTTTTTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKNLDPFEKEEAMRTIIFQSDVRSLDPVGGCYRIIRDLQRQIEYSKAELEIVLHQLAICKQQQAAAAILEADPMSGYGGIEHQFVEGYDGEGFVVGENENGESLDEEVEVWGIQDSGMSSCSSLQLKQGGGGSVHDFDDIKIDTHHHHHHHHQIQQQQLLKFQQDDHDLVHQSEEAMLKMDNVMLKEDTDPIQQAQEQELKGSVDTLFTFPICDT | 293 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 71375974 | 71378251 | + | Hsped.03g14600.1 | Hepe03g1460 | 566458 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe03g1460 | 293 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 32 | 241 | - | - | |
Hepe03g1460 | 293 | Pfam | Lateral organ boundaries (LOB) domain | 34 | 129 | IPR004883 | - | |
Hepe03g1460 | 293 | ProSiteProfiles | LOB domain profile. | 33 | 134 | IPR004883 | - | |
Hepe03g1460 | 293 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g3147 | Hepe-Chr2:80696914 | Hepe03g1460 | Hepe-Chr3:71375974 | 3.92e-31 | dispersed | |
Hepe03g1460 | Hepe-Chr3:71375974 | Hepe08g2048 | Hepe-Chr8:57459279 | 7.21e-29 | dispersed | |
Hepe03g1460 | Hepe-Chr3:71375974 | Hepe08g1396 | Hepe-Chr8:16469963 | 4.45e-29 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55291 | PF03195 | LOB | 1.60E-35 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe03g1460 | - | - | - | 0.0 |