Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1463 ATGAAAACTGCAGATATTTCCTTTGAAATTGGGACTCTGATGGGGTTTCGATTACTGTTTCTGCTGTTTGCAATTTGTTTTGCTGTTAGCTCTTTCTCTGTCTGTGAAGCTGCAGTTATCCTCCCGGGCAGGCTGAGCGGATCGCATTCTGTACTCCCAGACCATGCTGTCTCTCCAACATCTCATGGCTTTGGCAGGAAACACCATGGCAAGTTGGATAATGCAATTCCTAGCAAACCATTTAGAAGTTCATCTCCTCAGATCCACTCTCATTATAAAGCGATTCAATCAGACGATTCGAGTAGAGCTCCTAGCATTGCACTTCCACCTACCTCGGCTGCTAAGAAATGGGCGCACGATCGTGCCTTCTCACCATTGATCTCTTTCCACAAATTTCGCCGTTCAAGAAGGAAGTTCAGAAACAATGCTCCACAGCCTCCTTATCATGCATCACCCCCGACTAGCGGCCAGCAAGGCCCTGCTGCTGTCTCTCCAATTCAGTCACCGCTACCATCTGCGGCGAGAGGGAGGTTGCCCGGACCAGCGCCATCACCAACAATTCAACCCAATCACTATTATATGCCCATTCCTGCTCCTACAACTTCTCCTTTGGGTTCTTACAAAAAGAGGAAGAAGAGCATGCCACCATCACAAGTTATGGTTTTACCACCTCCACCTCCTAATGGGGATTGTGCAATAGCATGTACAGAGCCATTGACCTATACGCCTGCGGGGACGCCATGTGGTTGCGTGTGGCCAATTCAAGTCAAAATCAGTCTTGATGTTGCTATATACACATTTTTCCCTTTGGTTTCAGAGCTTGCAGAGGAAATTGCAGACAGTATCGCTCTGAACCATAGCCAAGTTCGAATTATGGGAGCTGATGCTGCTAGTCAGCAGTTAGAAAAAACAACCGTCCTCATCAACTTGGTTCCGAGAGGATTGAAATTCAATCATACCACGGCTTTTTCGATATATCAGAAATTTTGGCAGAGAGAGATATCCATCGACGCTTCTTTGTTTGGTAGATATCAAGTACTAAATGTCAAATATCCAGGTCTTCCGCCATCTCCTCCGTTGGCGCCTTCAGGTACTTCGTCCATTAATGATGGTTTGAACACTAGCAATGCTAATGCTGGAAATGCAATAAAACCGTTGGGAGTTGACGTGCCAAGAAGAAGAAAAGAAGGGCTTGGTGGGAACATGATTGCGGTGATTACAATATCGTCGTTCACTGCATTTGTTCTGTGTGTTGGACTTGCTTGGCTTTGCCTGTTGAGATGCAGAGTGTCTGCACATCAACCAGCACAAGTTTCACAAAACTTGATAGCTTCACCTACAAAACCATCAGGCACTGCTGGATTGATAATGGTTGGTGGTGAACCTGGTTCTTCATCGATGCCTCTCGATGCCGATCCTATGAATTATATTGGAGCTGCAAAGAACTTCACCTTGAAAGAAATGGAGAAAGCCACTGAAAACTTTGATGCTGCAAGAATATTAGGAGAAGGTGGCTTTGGAATTGTTTACAGTGGCAGTTTAGATGATGGAAGGGAAGTGGCTGTGAAGGTTCTCAAAAGGCATAATCAGCACGGTACTCGAGAATTCCTGGCAGAAGTCGAGATGCTGAGCCGTCTACACCATAGAAATCTAGTTAAGCTGATTGGTATCTGTACAGAAGATCAAATTCGCTGCCTGGTATATGAATTGGTTCCTAATGGAAGCGTTGAATCGCACTTACACAGCATTGACAAGTTAACTGGTCCTCTTGACTGGGATGCCCGGATGAAGATTGCCCTCGGTGCTGCTCGAGGCCTAGCCTATCTGCACGAAGACTCCAATCCTCGAGTCATTCATCGAGACTTCAAAGCTAGCAACATCTTATTAGAATACGACTTTACACCTAAAGTTTCAGATTTTGGATTAGCTAGAACTGCACTAGAGGAAGGAAACAAGCACATCTCAACACATGTCATGGGAACTTTTGGTTATCTAGCTCCAGAATATGCAATGACTGGCCACCTTCTTGTAAAGAGCGATGTTTACAGTTATGGTGTTGTCCTTCTCGAGCTACTCACAGGAAGAAAGCCAGTTGACTTATCGCTTCCACCCGGACAAGAAAATCTTGTTGCTTGGGCTCGTCCGCTTCTCACGAGCAAGGAGGGGTTAGATGCAATAACAGACACAGCTATTAAGTCTGATATCTCCATTGATAGCTTGGCCAGAGTAGCAGCAATTGCTTCTATGTGTGTGCAACCCGAAGTGACACACAGACCATTTATGGGCGAGGTTGTTCAAGCTCTAAAGCTTGTTTGCAATGAATTTGAAGAGACTAACGAGCCAGATTCACAAAATTACAGCCGAGACGAACTTCTAAGTTACATGGATAGTAAATTTGGAGGAATTTCAGGTGAAATATTAAATGCTGCCGAGTCCTCGCACCCGTTTCCTTCAGGAAAGCAGACGAATGTAGGGTTATCGGCATCGGATTTGATCAGTGCATCTGCAAGATATGAGGGACAGGAACTGGTTTCTTCCAGATGGCATTCATCAAACTCGGAACCGTTGAGAATGGGAAGAAAAAAGCACTTCTGGCAGAAGCTAAGAAGTTTGTCAAGAGGCAGCATCAGTGAACATGGCTTTTCCTCAAAGCTTTGGCCTGGATTTCATTAA 2673 45.19 MKTADISFEIGTLMGFRLLFLLFAICFAVSSFSVCEAAVILPGRLSGSHSVLPDHAVSPTSHGFGRKHHGKLDNAIPSKPFRSSSPQIHSHYKAIQSDDSSRAPSIALPPTSAAKKWAHDRAFSPLISFHKFRRSRRKFRNNAPQPPYHASPPTSGQQGPAAVSPIQSPLPSAARGRLPGPAPSPTIQPNHYYMPIPAPTTSPLGSYKKRKKSMPPSQVMVLPPPPPNGDCAIACTEPLTYTPAGTPCGCVWPIQVKISLDVAIYTFFPLVSELAEEIADSIALNHSQVRIMGADAASQQLEKTTVLINLVPRGLKFNHTTAFSIYQKFWQREISIDASLFGRYQVLNVKYPGLPPSPPLAPSGTSSINDGLNTSNANAGNAIKPLGVDVPRRRKEGLGGNMIAVITISSFTAFVLCVGLAWLCLLRCRVSAHQPAQVSQNLIASPTKPSGTAGLIMVGGEPGSSSMPLDADPMNYIGAAKNFTLKEMEKATENFDAARILGEGGFGIVYSGSLDDGREVAVKVLKRHNQHGTREFLAEVEMLSRLHHRNLVKLIGICTEDQIRCLVYELVPNGSVESHLHSIDKLTGPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEYDFTPKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSLPPGQENLVAWARPLLTSKEGLDAITDTAIKSDISIDSLARVAAIASMCVQPEVTHRPFMGEVVQALKLVCNEFEETNEPDSQNYSRDELLSYMDSKFGGISGEILNAAESSHPFPSGKQTNVGLSASDLISASARYEGQELVSSRWHSSNSEPLRMGRKKHFWQKLRSLSRGSISEHGFSSKLWPGFH 890
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 71399828 71404570 + Hsped.03g14630.1 Hepe03g1463 566461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1463 890 Pfam Protein tyrosine and serine/threonine kinase 498 768 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g1463 890 MobiDBLite consensus disorder prediction 140 195 - -
Hepe03g1463 890 FunFam Receptor-like serine/threonine-protein kinase ALE2 571 789 - -
Hepe03g1463 890 PANTHER OS01G0750732 PROTEIN 232 789 IPR050885 -
Hepe03g1463 890 ProSitePatterns Protein kinases ATP-binding region signature. 501 523 IPR017441 GO:0005524(InterPro)
Hepe03g1463 890 CDD STKc_IRAK 501 769 - -
Hepe03g1463 890 FunFam receptor-like serine/threonine-protein kinase ALE2 469 570 - -
Hepe03g1463 890 ProSiteProfiles Protein kinase domain profile. 495 776 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g1463 890 Gene3D Phosphorylase Kinase; domain 1 466 570 - -
Hepe03g1463 890 MobiDBLite consensus disorder prediction 176 192 - -
Hepe03g1463 890 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g1463 890 Gene3D Transferase(Phosphotransferase) domain 1 571 793 - -
Hepe03g1463 890 SUPERFAMILY Protein kinase-like (PK-like) 476 768 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1463 Hepe-Chr3:71399828 Hepe06g1881 Hepe-Chr6:70014497 5.74e-194 dispersed
Hepe03g1463 Hepe-Chr3:71399828 Hepe09g0874 Hepe-Chr9:8680676 8.87e-251 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72667 PF07714 PK_Tyr_Ser-Thr 1.40E-47 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1463 - - - 0.0