Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1471 ATGGACAGTTTATGTTTATGGGATGTTGTGGTAGTGACAGCCATTTTTTTTACCACCATTATTCTCTATAGGAATTTCTTTAGACTTTTCAGATCAAAATTCTGCAACCAACTCCCTTTAGGCTCTCTTGGCTGGCCTTTCATTGGTGAGACTATTGAGTTCATCTCCTGTGCTTATTCCGACCGCCCCGAAGCCTTCATGGACAAGCGTCGCCGCCTGTATGGGAAGGTATTCAAGTCACATATTTTTGGAAGTCCTACCATTGTTTCTACTGATGCAGAAGTCAGTAAGTTCATTCTGCAGAGTGATGCCAAGGCTTTTGTACCGTCTTACCCGAAATCCTTGACAGAATTGATGGGGAAGTCTTCCATTTTGCTGATAAATGGGAGCTTGCAGAAGAGAATTCATGGTCTTGTGGGAGCTTTCTTCAAGTCTTCTCATCTCAAAGCTCAAATAACCAAGGATATGGAGTGTTATGTCAAACTATCAATGGAAAATTGGACTGAAAACAATCCTATTTACCTTCAAGATGAAACCAAAAATATTTCCTTTCAAGTATTAGTAAAGATATTGATTAGTTTAAATCCTGGTCAAAGGATGGAGCTTCTCAAGCAACAGTTTCAAGAGTTCATCGCGGGGCTTATGGCTTTGCCGGTGAACATTCCCGGAAGCAGGCTTTACCGATCGCTGCAGGCCAAAAGGAATATGGTTAAACTAGTAAAGAAGATAATACAAGAAAGAAAAAGCAGTGGAATTTCCCCTGTTCCAAAAGATGTCATGGAAGTTTTGCTCAAAGATGAAAGTGAACAACTAACAGATGATCTAATAGCAGGGAACATGATTGACATGATGATTCCTGGGGAAGATTCAGTGCCAATCTTGATGACTCTTGCAGTAAAATACCTCTCTGATTGCCCCGCTGCACTTCAACAGTTAACGGAGGAGAACTTGAAGATGAAAAGACTAAAAGAGCAGCTCGGAGAACCGTTGCATTGGAGCGATTACTTATCGCTGCCATTTACGCAGAGTGTGATCACGGAGACGCTAAGGATGGGAAACATCATAATCGGGGTGATGCGAAAGGCCATGAAAGACATGAAGATAAAAGGACACCTAATACCGAAAGGTTGGTCGGTACTAACGTACTTTAGATCCGTTCATCTCGACAACAATCACTATGACTCACCTTACAAATTCAATCCATGGAGGTGGCAAGATAGAGACTTGAGTAGTAATTGTAACTTCACTCCTTTTGGAGGTGGACAAAGACTATGCCCTGGACTTGACTTGGCCAGGCTTGAAGCTTCCATCTTCCTTCATCACTTTGTCACTCAGTTCAGATGGATTGCAGAGGAAGATAGAATCATAAACTTCCCCACAGTGAGGATGAAGAAGAGGATGCCAGTTTGGGTGAAGAGAAGAAGGGATCCATGA 1434 42.19 MDSLCLWDVVVVTAIFFTTIILYRNFFRLFRSKFCNQLPLGSLGWPFIGETIEFISCAYSDRPEAFMDKRRRLYGKVFKSHIFGSPTIVSTDAEVSKFILQSDAKAFVPSYPKSLTELMGKSSILLINGSLQKRIHGLVGAFFKSSHLKAQITKDMECYVKLSMENWTENNPIYLQDETKNISFQVLVKILISLNPGQRMELLKQQFQEFIAGLMALPVNIPGSRLYRSLQAKRNMVKLVKKIIQERKSSGISPVPKDVMEVLLKDESEQLTDDLIAGNMIDMMIPGEDSVPILMTLAVKYLSDCPAALQQLTEENLKMKRLKEQLGEPLHWSDYLSLPFTQSVITETLRMGNIIIGVMRKAMKDMKIKGHLIPKGWSVLTYFRSVHLDNNHYDSPYKFNPWRWQDRDLSSNCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTQFRWIAEEDRIINFPTVRMKKRMPVWVKRRRDP 477
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 71482274 71485768 + Hsped.03g14710.1 Hepe03g1471 566469
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1471 477 Pfam Cytochrome P450 40 454 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1471 477 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1471 477 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1471 477 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1471 477 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1471 477 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1471 477 CDD CYP90-like 70 469 - -
Hepe03g1471 477 Gene3D Cytochrome P450 32 474 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1471 477 PANTHER CYTOCHROME P450 26 37 450 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER)
Hepe03g1471 477 SUPERFAMILY Cytochrome P450 37 474 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1471 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Hepe03g1471 477 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 30 474 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1471 Hepe-Chr3:71482274 Hepe05g1828 Hepe-Chr5:68615588 7.44e-77 dispersed
Hepe01g0725 Hepe-Chr1:70030965 Hepe03g1471 Hepe-Chr3:71482274 2.03e-123 transposed
Hepe01g1287 Hepe-Chr1:78073209 Hepe03g1471 Hepe-Chr3:71482274 2.93e-66 transposed
Hepe02g3062 Hepe-Chr2:79779298 Hepe03g1471 Hepe-Chr3:71482274 3.00e-63 transposed
Hepe02g3215 Hepe-Chr2:81731279 Hepe03g1471 Hepe-Chr3:71482274 4.98e-98 transposed
Hepe04g1557 Hepe-Chr4:71104230 Hepe03g1471 Hepe-Chr3:71482274 1.01e-178 transposed
Hepe06g1217 Hepe-Chr6:61728690 Hepe03g1471 Hepe-Chr3:71482274 6.29e-54 transposed
Hepe07g0673 Hepe-Chr7:7823065 Hepe03g1471 Hepe-Chr3:71482274 8.62e-55 transposed
Hepe02g1478 Hepe-Chr2:19193017 Hepe03g1471 Hepe-Chr3:71482274 7.65e-229 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1471 K12638 - csv:101217830 829.706