Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1490 ATGGGATTATCAGGGTTCCATTCCCTCTTTGGTTTTCTGCTATGTGGTCCAACTCTTCTACTTCTTGTTCAAGCTCAGGAGCAGTCAGGCTTCATTAGTTTAGACTGTGGAACACCAGAGAGTACGAGTTACACCGAAACGACGACCAAGATTAACTACGTTTCTGATGCACCCTACATAAGCAGTGGTGTAAGTGGAAGCGTAGCTTCGATTTATGGAGACACCTACCAAAGGCAAATGAGGAAACTTAGAAGCTTCCCTCAAGGAATCAGAAACTGTTACAATGTAAGCGTTAAAAAGGGTACCAAATACTTGATTCGAGCAAGTTTCTTATACGGGAATTACGATAGCCTGAATTCGCTACCGAAGTTCGATCTCTATGTTGGGAATAGCTTATGGGAGACAATAAACTTCACTACCGTTGGCATTGACACTATCAAAGATCTCATACATACTACCTCCTCAAATAAAGTTCACATATGTCTGATCAATACAGGAAACGGGGTGCCATTTATTTCAGCATTAGAATTTAGACCTTTACTGGACATCACTTATCAAACAGCGTCGGGATCCTTATCACTAAAATTTCGATTGGACATCGGTTCAACAGACAATGGAACATACAGATTCCCTTCCGATGTTTATGATCGCATCTGGACACCATTTAACTTCAATGAGTGGACACAAGTGAGCACTAATCAAACTGTAGATGCTACTGCTCACAACAATCACCAACCGCCATCGGTTGTCATGAAAACTGCTTCCACCCCAATAAATGCAAGCAAGCCACTGGAAATTTGGTGGGATACAGAAGGTTCATCTCAATATTATGTGTTTATCCACCTTGCTGAAGTTGTAGAGCTACAAGGCAACCAGAGTAGAGGATTCAATGTCACGCACAATGGGGACCATTTTTATGGACCTGTAATTCCAACTTATTTGTCCACACTGACCATTTTTGGTCAAAAACCATTGGATGCAGCAGATAGACATACATTTTCTTTAATTCCAATTGAGAATGCAACGCTTCCTCCAATCGTCAATGCTTTCGAGATATATATACTGAAAGATATATCAGAGTTAGAAGCAGATAAAGGAGATGTGGATGCTATTACCAACATCAACTCAACCTATGGGGTAAAGAGGAATTGGCAAGGAGATCCTTGTGTGCCAATGGGATATCCCTGGAGTGGATTAAATTGTAGCAATGAAGCTGCACCAAGAATCATATCCTTGAACCTATCTGCAAGTGGACTGAACGGTGAAATATCTTCTTACATATCCAGTCTAACAATGTTGCAGACTTTGGACTTGTCAAACAATAATTTGACAGGGAAAGTGCCCGATTTCCTGTCTAGTTTGTCACACCTCAAAATCCTGAACTTAGGTAACAACAAGCTCTCAGGTCAAATTCCGGCTGATCTTTTGAAAAGATCCAATGATGGTTCACTATCATTAAGGTCAAATCTCGATGGATGTGCATCAGATCCGTGTCCAAAGAATGAAGAGAAGAAGAACAGCATCATCATTCCAATTGTAGCATCAATTGGTGGATTCCTAGTTGTCGTCACAATTGCTGCAATAATCTTTTGGATCATCAAATCTCGAAAGAAACAAGGTAAAAATGTTGTCTCAGTGGTGGAAAAGTCAGAAACAAACAGTCAATTTGGTAATTCATTGGAGGTGAGAAGACGACAATTTACATATTCTGAGGTGGTGAAAATGACCAACAATTTCAAGAAAGTTCTCGGTAAAGGAGGTTTCGGGGAGGTCTATTATGGTGAAATTGACGACATTCAAGTGGCTGTGAAGATGTTGTCTTTATCATCATCTCAAGGATATCGGCAATTTCAAGCAGAGGTTACCCTTCTTATGAGAGTTCACCATAAGAACTTGACAAGCCTTGTTGGATATTTGAATGAAGGAAACCACCTCGGCCTCGTTTACGAGTACATGGCCAATGGAGATTTAGCAGAACACCTTTCAGCAGAGAGGAGTGTGCGTATCTTAAGCTGGGAAGATAGACTTCGAATAGCAATGGATGCAGCTCAAGGACTGGAGTACCTGCATTTCGGTTGTAAGCCACCCATAGTCCACAGAGATGTGAAAACATCAAACATCTTGTTGACAGAGAATCTCCAAGGCAAACTTGCAGATTTTGGTCTTTCGAAAAGCTTCCCCACAGATGGCAATACCCACATGTCCACAGTTGTTGCTGGCACGCCTGGTTACCTTGATCCAGAGTACTACGTATCAAACAGGCTGACAGAGAAAAGCGATGTGTACAGCTTTGGGATCGCTTTATTTGAGATAATCAGTTGCAAACCAGTAATATCAAGAACAGGCGATACACCACATATAGCAAAATGGGTTGCATCTTTGGTGGCGCAAGGAGATATTCAGAACATAGTCGATCCAAGATTAGAAGGGCAATATGAAACTAACTCTGTTTGGAAAACGGTGGAAGTGGCAATGGCTTGTGTAACGGCAAATTCCAGTAGAAGGCCGACGATGAGCGACGTTATGGCTGAACTCAAAGATTGCTTAGCCACGGAATTGAGTCGAAAGCAAGAGAATCGGACGCTTGATTCAAGAAATTCCTTTGAAATGAGGTCCATCTCTGTAGAGTTTGGTGCTTCTGATTCTACTCCCTTGGCGAGGTTTTCATCCAAACAAAACAAACTTGAAATCCTATCTGCAGTCAACCAGAAAGAGATTCTAAGGGTGATGATGAATACAAGAACAAGAAGTTTTCTAATTTGTTTAGCTCTTGTACATGTTATTCAAGCTCAAGATCAATCAGGTTTTATAAGCTTGGATTGTGGACTAACAGCAAATTCTAGCTACACAACAAATATCACCTACATATCAGATGCAGCATACATAAACAGCGGTGAAAGCAAAAGCATAGACTTGAACCAAAATAGCTATGAACGACAACTATGGTCCCTTAGAAGCTTTCCTGAAGGCACCAGGAACTGTTACAACATAAGCGATATTACTAGTGGCACCAAATACTTAATTCGAGCCAGCTTCTTGTATGGTAATTATGATGGGTTGAGATCTTTGCCAATCTTTTATCTCTACTATGGAGATAGCATGTGGGACACAGTAAATATTACGTTAGAAGCGTCTACGTTCAATTACGAAATCATTCATATTCCATCAGCAAGCAAAGTACAAATCTGCCTGATCAATATAGGAGCCGGAATACCTTTCATCTCTGCATTGGAATTCAGACCTTTGCCAGATATTACTTACCCAATTGAATATGGATCCTTGTCACTTTTTACTCGATTGGATATGGGTTCAACATCAAACATATCATACAGGTTCCCTTACGATGTTTTCGATCGGTTATGGTATCCTTATAATAATGATAAAGTTTTCAATCGATTAAGTACCTCTTTTCCTGTAGATGCCGATACTCCCACACAGTATCAACCAGCAGCCATTGTCATGCAAACTGCTTTTACCCCCAAAAATACCAGCGGATCTTTTACTCTTTTTTGGCCTTCAGCTGATGAAAATACCCAATATTATATATATCTTTACTTTGCTGAGCTGGAAAAGCTTCAACCCAAACAATTTAGAGGCTTCAACATCAGTCATAATGAGAAATATTGGCAGGGACCTATTATTCCTGATTACTTGCACACAAGCAGCATTTATAGCATCAAACCAATTGAATTTCCAGAAAAGCAACACAACATTTTATTTTCTCAAATTGAAAATTCAACGCTTCCTCCAATCCTCAATGCTGTAGAAATTTATTCCAATATTCCGATCTCAGAATTAGAATCAGATCAAGGAGATGTGGATGCAATCAGAAAAATAAAGTCAACTTACGGAGTGATCAAAGATTGGGAAGGAGATCCATGCATCCCAAGAGCATATCCTTGGAGTGGTATAGGTTGCAGCAATGAGTCAACCCCAAGAATCATATCACTGAACTTGTCATCGAGTGGTCTGACAGGTGATATATCTCCTGATATATCCAATCTAACGGCCTTACAAATTTTGGACTTATCAAACAATAGCTTAACAGGAAAACTACCCGATTCTTTATCCAAATTGTCAAACCTCAAAGTCCTAAATTTAAAGAACAACAATCTCTCATGTCCAATTGAACTCAAAGATAGTTCAATATCATTAAGTGTAGAATGCAACAACGAAAAAGTGGTGGAGAAGGAGAAGGAGAAGAATAAGAACAAAGTTGTAATTCCAGTAGTAGCATCAATCGGTGGCCTGCTTGTCATTGCCGTAATTGCAGGGATTGTCTTTTGGATTGCTAGATCAAAAGGGAAACAACAAGGTAAAGATGTCTTGGAGATGGATCATCCAGAAACCAACATTAACGTTGGTGGCAGTTCTATGGAAACTAGAAGCCGACAGTTTACTTATGCTGAAGTTGTGAGAGTGACCAACAATTTTGCGAGGATTCTTGGTAGAGGTAGTTTTGGAGCGGTTTACCATGGATTGGTTGATGATATTCAAGTAGCTGTGAAGATGCTAGCTCCATCAGCAATACAAGGCCACGATCAATTTAAAGCAGAGGAATGGTATTTGAATGAAGGAACTCACCTTAGCCTCATTTATGAGTACATGGCCAACGGAAGTTTAGCACAGCGCCTTTCTGAGATAAGTTCAAGAGTCATAAGTTGGGAAGATAGAGTCCGAATAGCAATGGATGCAGCTCAAGTGAGTTGTAAGCCAGTGATATTAAAATCTCAAGGCCAAGATTCGATTCATATAATCAAATGGGTTGGTTCCATGGTTGCTCAAGGTGATATTAGAAATATAGCAGACCCAAGATTAAAAGGAGAATATAACATACACTCTATTCGGAAAGCAGTGGAAGTAGCAATGGCTTGTGTATCAGTGAATTCTGATAGAAGGCCAACAATGAATCAAGTGGTGGCAGAACTGAAAGGTTGCTTAGCCACAGAATTGAATCGAACGCCGGACAGTCAGCCTTCTCATTCAACAGAGTCCATGGAAATGACATCCATCTACATGGTTTTGCCTCCTCAATCAGGTCCCATGGCGAGGTGA 5055 40.32 MGLSGFHSLFGFLLCGPTLLLLVQAQEQSGFISLDCGTPESTSYTETTTKINYVSDAPYISSGVSGSVASIYGDTYQRQMRKLRSFPQGIRNCYNVSVKKGTKYLIRASFLYGNYDSLNSLPKFDLYVGNSLWETINFTTVGIDTIKDLIHTTSSNKVHICLINTGNGVPFISALEFRPLLDITYQTASGSLSLKFRLDIGSTDNGTYRFPSDVYDRIWTPFNFNEWTQVSTNQTVDATAHNNHQPPSVVMKTASTPINASKPLEIWWDTEGSSQYYVFIHLAEVVELQGNQSRGFNVTHNGDHFYGPVIPTYLSTLTIFGQKPLDAADRHTFSLIPIENATLPPIVNAFEIYILKDISELEADKGDVDAITNINSTYGVKRNWQGDPCVPMGYPWSGLNCSNEAAPRIISLNLSASGLNGEISSYISSLTMLQTLDLSNNNLTGKVPDFLSSLSHLKILNLGNNKLSGQIPADLLKRSNDGSLSLRSNLDGCASDPCPKNEEKKNSIIIPIVASIGGFLVVVTIAAIIFWIIKSRKKQGKNVVSVVEKSETNSQFGNSLEVRRRQFTYSEVVKMTNNFKKVLGKGGFGEVYYGEIDDIQVAVKMLSLSSSQGYRQFQAEVTLLMRVHHKNLTSLVGYLNEGNHLGLVYEYMANGDLAEHLSAERSVRILSWEDRLRIAMDAAQGLEYLHFGCKPPIVHRDVKTSNILLTENLQGKLADFGLSKSFPTDGNTHMSTVVAGTPGYLDPEYYVSNRLTEKSDVYSFGIALFEIISCKPVISRTGDTPHIAKWVASLVAQGDIQNIVDPRLEGQYETNSVWKTVEVAMACVTANSSRRPTMSDVMAELKDCLATELSRKQENRTLDSRNSFEMRSISVEFGASDSTPLARFSSKQNKLEILSAVNQKEILRVMMNTRTRSFLICLALVHVIQAQDQSGFISLDCGLTANSSYTTNITYISDAAYINSGESKSIDLNQNSYERQLWSLRSFPEGTRNCYNISDITSGTKYLIRASFLYGNYDGLRSLPIFYLYYGDSMWDTVNITLEASTFNYEIIHIPSASKVQICLINIGAGIPFISALEFRPLPDITYPIEYGSLSLFTRLDMGSTSNISYRFPYDVFDRLWYPYNNDKVFNRLSTSFPVDADTPTQYQPAAIVMQTAFTPKNTSGSFTLFWPSADENTQYYIYLYFAELEKLQPKQFRGFNISHNEKYWQGPIIPDYLHTSSIYSIKPIEFPEKQHNILFSQIENSTLPPILNAVEIYSNIPISELESDQGDVDAIRKIKSTYGVIKDWEGDPCIPRAYPWSGIGCSNESTPRIISLNLSSSGLTGDISPDISNLTALQILDLSNNSLTGKLPDSLSKLSNLKVLNLKNNNLSCPIELKDSSISLSVECNNEKVVEKEKEKNKNKVVIPVVASIGGLLVIAVIAGIVFWIARSKGKQQGKDVLEMDHPETNINVGGSSMETRSRQFTYAEVVRVTNNFARILGRGSFGAVYHGLVDDIQVAVKMLAPSAIQGHDQFKAEEWYLNEGTHLSLIYEYMANGSLAQRLSEISSRVISWEDRVRIAMDAAQVSCKPVILKSQGQDSIHIIKWVGSMVAQGDIRNIADPRLKGEYNIHSIRKAVEVAMACVSVNSDRRPTMNQVVAELKGCLATELNRTPDSQPSHSTESMEMTSIYMVLPPQSGPMAR 1684
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 71729185 71743329 - Hsped.03g14900.1 Hepe03g1490 566488
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1490 1684 Gene3D Phosphorylase Kinase; domain 1 1457 1537 - -
Hepe03g1490 1684 FunFam Leucine-rich repeat receptor-like kinase 367 490 - -
Hepe03g1490 1684 FunFam Leucine-rich repeat receptor-like protein kinase 549 651 - -
Hepe03g1490 1684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 697 709 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g1490 1684 Gene3D Phosphorylase Kinase; domain 1 564 651 - -
Hepe03g1490 1684 SUPERFAMILY Protein kinase-like (PK-like) 1460 1567 IPR011009 -
Hepe03g1490 1684 SUPERFAMILY Protein kinase-like (PK-like) 1574 1670 IPR011009 -
Hepe03g1490 1684 Pfam Leucine Rich repeats (2 copies) 432 468 IPR025875 -
Hepe03g1490 1684 SMART serkin_6 577 849 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g1490 1684 SMART LRR_typ_2 1335 1358 IPR003591 -
Hepe03g1490 1684 SMART LRR_typ_2 1359 1385 IPR003591 -
Hepe03g1490 1684 SMART LRR_typ_2 454 478 IPR003591 -
Hepe03g1490 1684 SMART LRR_typ_2 430 453 IPR003591 -
Hepe03g1490 1684 Gene3D Transferase(Phosphotransferase) domain 1 652 872 - -
Hepe03g1490 1684 Gene3D Transferase(Phosphotransferase) domain 1 1568 1666 - -
Hepe03g1490 1684 ProSitePatterns Protein kinases ATP-binding region signature. 583 604 IPR017441 GO:0005524(InterPro)
Hepe03g1490 1684 SUPERFAMILY L domain-like 1298 1375 - -
Hepe03g1490 1684 Gene3D Ribonuclease Inhibitor 1274 1397 IPR032675 -
Hepe03g1490 1684 Gene3D Ribonuclease Inhibitor 369 485 IPR032675 -
Hepe03g1490 1684 Pfam Protein tyrosine and serine/threonine kinase 579 845 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g1490 1684 PRINTS Leucine-rich repeat signature 454 467 - -
Hepe03g1490 1684 PRINTS Leucine-rich repeat signature 433 446 - -
Hepe03g1490 1684 FunFam Leucine-rich repeat receptor-like kinase 1272 1397 - -
Hepe03g1490 1684 SUPERFAMILY L domain-like 391 480 - -
Hepe03g1490 1684 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 652 858 - -
Hepe03g1490 1684 PANTHER OS07G0107800 PROTEIN-RELATED 23 854 - -
Hepe03g1490 1684 Pfam Malectin-like domain 939 1259 IPR024788 -
Hepe03g1490 1684 Pfam Malectin-like domain 34 353 IPR024788 -
Hepe03g1490 1684 SUPERFAMILY Protein kinase-like (PK-like) 556 845 IPR011009 -
Hepe03g1490 1684 ProSiteProfiles Leucine-rich repeat profile. 432 454 IPR001611 GO:0005515(InterPro)
Hepe03g1490 1684 Pfam Leucine rich repeat 1316 1372 IPR001611 GO:0005515(InterPro)
Hepe03g1490 1684 ProSiteProfiles Protein kinase domain profile. 577 849 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g1490 1684 ProSitePatterns Protein kinases ATP-binding region signature. 1482 1503 IPR017441 GO:0005524(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1519 Hepe-Chr1:80407148 Hepe03g1490 Hepe-Chr3:71729185 8.06e-249 dispersed
Hepe02g1458 Hepe-Chr2:18671835 Hepe03g1490 Hepe-Chr3:71729185 7.61e-93 dispersed
Hepe02g1462 Hepe-Chr2:18791422 Hepe03g1490 Hepe-Chr3:71729185 2.78e-247 dispersed
Hepe02g1463 Hepe-Chr2:18799846 Hepe03g1490 Hepe-Chr3:71729185 1.30e-229 dispersed
Hepe03g1488 Hepe-Chr3:71709024 Hepe03g1490 Hepe-Chr3:71729185 2.06e-231 dispersed
Hepe03g1490 Hepe-Chr3:71729185 Hepe03g1492 Hepe-Chr3:71763327 0.0 dispersed
Hepe03g1489 Hepe-Chr3:71721684 Hepe03g1490 Hepe-Chr3:71729185 5.88e-212 tandem
Hepe03g1490 Hepe-Chr3:71729185 Hepe03g1491 Hepe-Chr3:71748266 1.77e-30 tandem
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72670 PF12819 Malectin_like 6.90E-101 CL0202 Hepe PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1490 - - - 0.0