Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe03g1490 | ATGGGATTATCAGGGTTCCATTCCCTCTTTGGTTTTCTGCTATGTGGTCCAACTCTTCTACTTCTTGTTCAAGCTCAGGAGCAGTCAGGCTTCATTAGTTTAGACTGTGGAACACCAGAGAGTACGAGTTACACCGAAACGACGACCAAGATTAACTACGTTTCTGATGCACCCTACATAAGCAGTGGTGTAAGTGGAAGCGTAGCTTCGATTTATGGAGACACCTACCAAAGGCAAATGAGGAAACTTAGAAGCTTCCCTCAAGGAATCAGAAACTGTTACAATGTAAGCGTTAAAAAGGGTACCAAATACTTGATTCGAGCAAGTTTCTTATACGGGAATTACGATAGCCTGAATTCGCTACCGAAGTTCGATCTCTATGTTGGGAATAGCTTATGGGAGACAATAAACTTCACTACCGTTGGCATTGACACTATCAAAGATCTCATACATACTACCTCCTCAAATAAAGTTCACATATGTCTGATCAATACAGGAAACGGGGTGCCATTTATTTCAGCATTAGAATTTAGACCTTTACTGGACATCACTTATCAAACAGCGTCGGGATCCTTATCACTAAAATTTCGATTGGACATCGGTTCAACAGACAATGGAACATACAGATTCCCTTCCGATGTTTATGATCGCATCTGGACACCATTTAACTTCAATGAGTGGACACAAGTGAGCACTAATCAAACTGTAGATGCTACTGCTCACAACAATCACCAACCGCCATCGGTTGTCATGAAAACTGCTTCCACCCCAATAAATGCAAGCAAGCCACTGGAAATTTGGTGGGATACAGAAGGTTCATCTCAATATTATGTGTTTATCCACCTTGCTGAAGTTGTAGAGCTACAAGGCAACCAGAGTAGAGGATTCAATGTCACGCACAATGGGGACCATTTTTATGGACCTGTAATTCCAACTTATTTGTCCACACTGACCATTTTTGGTCAAAAACCATTGGATGCAGCAGATAGACATACATTTTCTTTAATTCCAATTGAGAATGCAACGCTTCCTCCAATCGTCAATGCTTTCGAGATATATATACTGAAAGATATATCAGAGTTAGAAGCAGATAAAGGAGATGTGGATGCTATTACCAACATCAACTCAACCTATGGGGTAAAGAGGAATTGGCAAGGAGATCCTTGTGTGCCAATGGGATATCCCTGGAGTGGATTAAATTGTAGCAATGAAGCTGCACCAAGAATCATATCCTTGAACCTATCTGCAAGTGGACTGAACGGTGAAATATCTTCTTACATATCCAGTCTAACAATGTTGCAGACTTTGGACTTGTCAAACAATAATTTGACAGGGAAAGTGCCCGATTTCCTGTCTAGTTTGTCACACCTCAAAATCCTGAACTTAGGTAACAACAAGCTCTCAGGTCAAATTCCGGCTGATCTTTTGAAAAGATCCAATGATGGTTCACTATCATTAAGGTCAAATCTCGATGGATGTGCATCAGATCCGTGTCCAAAGAATGAAGAGAAGAAGAACAGCATCATCATTCCAATTGTAGCATCAATTGGTGGATTCCTAGTTGTCGTCACAATTGCTGCAATAATCTTTTGGATCATCAAATCTCGAAAGAAACAAGGTAAAAATGTTGTCTCAGTGGTGGAAAAGTCAGAAACAAACAGTCAATTTGGTAATTCATTGGAGGTGAGAAGACGACAATTTACATATTCTGAGGTGGTGAAAATGACCAACAATTTCAAGAAAGTTCTCGGTAAAGGAGGTTTCGGGGAGGTCTATTATGGTGAAATTGACGACATTCAAGTGGCTGTGAAGATGTTGTCTTTATCATCATCTCAAGGATATCGGCAATTTCAAGCAGAGGTTACCCTTCTTATGAGAGTTCACCATAAGAACTTGACAAGCCTTGTTGGATATTTGAATGAAGGAAACCACCTCGGCCTCGTTTACGAGTACATGGCCAATGGAGATTTAGCAGAACACCTTTCAGCAGAGAGGAGTGTGCGTATCTTAAGCTGGGAAGATAGACTTCGAATAGCAATGGATGCAGCTCAAGGACTGGAGTACCTGCATTTCGGTTGTAAGCCACCCATAGTCCACAGAGATGTGAAAACATCAAACATCTTGTTGACAGAGAATCTCCAAGGCAAACTTGCAGATTTTGGTCTTTCGAAAAGCTTCCCCACAGATGGCAATACCCACATGTCCACAGTTGTTGCTGGCACGCCTGGTTACCTTGATCCAGAGTACTACGTATCAAACAGGCTGACAGAGAAAAGCGATGTGTACAGCTTTGGGATCGCTTTATTTGAGATAATCAGTTGCAAACCAGTAATATCAAGAACAGGCGATACACCACATATAGCAAAATGGGTTGCATCTTTGGTGGCGCAAGGAGATATTCAGAACATAGTCGATCCAAGATTAGAAGGGCAATATGAAACTAACTCTGTTTGGAAAACGGTGGAAGTGGCAATGGCTTGTGTAACGGCAAATTCCAGTAGAAGGCCGACGATGAGCGACGTTATGGCTGAACTCAAAGATTGCTTAGCCACGGAATTGAGTCGAAAGCAAGAGAATCGGACGCTTGATTCAAGAAATTCCTTTGAAATGAGGTCCATCTCTGTAGAGTTTGGTGCTTCTGATTCTACTCCCTTGGCGAGGTTTTCATCCAAACAAAACAAACTTGAAATCCTATCTGCAGTCAACCAGAAAGAGATTCTAAGGGTGATGATGAATACAAGAACAAGAAGTTTTCTAATTTGTTTAGCTCTTGTACATGTTATTCAAGCTCAAGATCAATCAGGTTTTATAAGCTTGGATTGTGGACTAACAGCAAATTCTAGCTACACAACAAATATCACCTACATATCAGATGCAGCATACATAAACAGCGGTGAAAGCAAAAGCATAGACTTGAACCAAAATAGCTATGAACGACAACTATGGTCCCTTAGAAGCTTTCCTGAAGGCACCAGGAACTGTTACAACATAAGCGATATTACTAGTGGCACCAAATACTTAATTCGAGCCAGCTTCTTGTATGGTAATTATGATGGGTTGAGATCTTTGCCAATCTTTTATCTCTACTATGGAGATAGCATGTGGGACACAGTAAATATTACGTTAGAAGCGTCTACGTTCAATTACGAAATCATTCATATTCCATCAGCAAGCAAAGTACAAATCTGCCTGATCAATATAGGAGCCGGAATACCTTTCATCTCTGCATTGGAATTCAGACCTTTGCCAGATATTACTTACCCAATTGAATATGGATCCTTGTCACTTTTTACTCGATTGGATATGGGTTCAACATCAAACATATCATACAGGTTCCCTTACGATGTTTTCGATCGGTTATGGTATCCTTATAATAATGATAAAGTTTTCAATCGATTAAGTACCTCTTTTCCTGTAGATGCCGATACTCCCACACAGTATCAACCAGCAGCCATTGTCATGCAAACTGCTTTTACCCCCAAAAATACCAGCGGATCTTTTACTCTTTTTTGGCCTTCAGCTGATGAAAATACCCAATATTATATATATCTTTACTTTGCTGAGCTGGAAAAGCTTCAACCCAAACAATTTAGAGGCTTCAACATCAGTCATAATGAGAAATATTGGCAGGGACCTATTATTCCTGATTACTTGCACACAAGCAGCATTTATAGCATCAAACCAATTGAATTTCCAGAAAAGCAACACAACATTTTATTTTCTCAAATTGAAAATTCAACGCTTCCTCCAATCCTCAATGCTGTAGAAATTTATTCCAATATTCCGATCTCAGAATTAGAATCAGATCAAGGAGATGTGGATGCAATCAGAAAAATAAAGTCAACTTACGGAGTGATCAAAGATTGGGAAGGAGATCCATGCATCCCAAGAGCATATCCTTGGAGTGGTATAGGTTGCAGCAATGAGTCAACCCCAAGAATCATATCACTGAACTTGTCATCGAGTGGTCTGACAGGTGATATATCTCCTGATATATCCAATCTAACGGCCTTACAAATTTTGGACTTATCAAACAATAGCTTAACAGGAAAACTACCCGATTCTTTATCCAAATTGTCAAACCTCAAAGTCCTAAATTTAAAGAACAACAATCTCTCATGTCCAATTGAACTCAAAGATAGTTCAATATCATTAAGTGTAGAATGCAACAACGAAAAAGTGGTGGAGAAGGAGAAGGAGAAGAATAAGAACAAAGTTGTAATTCCAGTAGTAGCATCAATCGGTGGCCTGCTTGTCATTGCCGTAATTGCAGGGATTGTCTTTTGGATTGCTAGATCAAAAGGGAAACAACAAGGTAAAGATGTCTTGGAGATGGATCATCCAGAAACCAACATTAACGTTGGTGGCAGTTCTATGGAAACTAGAAGCCGACAGTTTACTTATGCTGAAGTTGTGAGAGTGACCAACAATTTTGCGAGGATTCTTGGTAGAGGTAGTTTTGGAGCGGTTTACCATGGATTGGTTGATGATATTCAAGTAGCTGTGAAGATGCTAGCTCCATCAGCAATACAAGGCCACGATCAATTTAAAGCAGAGGAATGGTATTTGAATGAAGGAACTCACCTTAGCCTCATTTATGAGTACATGGCCAACGGAAGTTTAGCACAGCGCCTTTCTGAGATAAGTTCAAGAGTCATAAGTTGGGAAGATAGAGTCCGAATAGCAATGGATGCAGCTCAAGTGAGTTGTAAGCCAGTGATATTAAAATCTCAAGGCCAAGATTCGATTCATATAATCAAATGGGTTGGTTCCATGGTTGCTCAAGGTGATATTAGAAATATAGCAGACCCAAGATTAAAAGGAGAATATAACATACACTCTATTCGGAAAGCAGTGGAAGTAGCAATGGCTTGTGTATCAGTGAATTCTGATAGAAGGCCAACAATGAATCAAGTGGTGGCAGAACTGAAAGGTTGCTTAGCCACAGAATTGAATCGAACGCCGGACAGTCAGCCTTCTCATTCAACAGAGTCCATGGAAATGACATCCATCTACATGGTTTTGCCTCCTCAATCAGGTCCCATGGCGAGGTGA | 5055 | 40.32 | MGLSGFHSLFGFLLCGPTLLLLVQAQEQSGFISLDCGTPESTSYTETTTKINYVSDAPYISSGVSGSVASIYGDTYQRQMRKLRSFPQGIRNCYNVSVKKGTKYLIRASFLYGNYDSLNSLPKFDLYVGNSLWETINFTTVGIDTIKDLIHTTSSNKVHICLINTGNGVPFISALEFRPLLDITYQTASGSLSLKFRLDIGSTDNGTYRFPSDVYDRIWTPFNFNEWTQVSTNQTVDATAHNNHQPPSVVMKTASTPINASKPLEIWWDTEGSSQYYVFIHLAEVVELQGNQSRGFNVTHNGDHFYGPVIPTYLSTLTIFGQKPLDAADRHTFSLIPIENATLPPIVNAFEIYILKDISELEADKGDVDAITNINSTYGVKRNWQGDPCVPMGYPWSGLNCSNEAAPRIISLNLSASGLNGEISSYISSLTMLQTLDLSNNNLTGKVPDFLSSLSHLKILNLGNNKLSGQIPADLLKRSNDGSLSLRSNLDGCASDPCPKNEEKKNSIIIPIVASIGGFLVVVTIAAIIFWIIKSRKKQGKNVVSVVEKSETNSQFGNSLEVRRRQFTYSEVVKMTNNFKKVLGKGGFGEVYYGEIDDIQVAVKMLSLSSSQGYRQFQAEVTLLMRVHHKNLTSLVGYLNEGNHLGLVYEYMANGDLAEHLSAERSVRILSWEDRLRIAMDAAQGLEYLHFGCKPPIVHRDVKTSNILLTENLQGKLADFGLSKSFPTDGNTHMSTVVAGTPGYLDPEYYVSNRLTEKSDVYSFGIALFEIISCKPVISRTGDTPHIAKWVASLVAQGDIQNIVDPRLEGQYETNSVWKTVEVAMACVTANSSRRPTMSDVMAELKDCLATELSRKQENRTLDSRNSFEMRSISVEFGASDSTPLARFSSKQNKLEILSAVNQKEILRVMMNTRTRSFLICLALVHVIQAQDQSGFISLDCGLTANSSYTTNITYISDAAYINSGESKSIDLNQNSYERQLWSLRSFPEGTRNCYNISDITSGTKYLIRASFLYGNYDGLRSLPIFYLYYGDSMWDTVNITLEASTFNYEIIHIPSASKVQICLINIGAGIPFISALEFRPLPDITYPIEYGSLSLFTRLDMGSTSNISYRFPYDVFDRLWYPYNNDKVFNRLSTSFPVDADTPTQYQPAAIVMQTAFTPKNTSGSFTLFWPSADENTQYYIYLYFAELEKLQPKQFRGFNISHNEKYWQGPIIPDYLHTSSIYSIKPIEFPEKQHNILFSQIENSTLPPILNAVEIYSNIPISELESDQGDVDAIRKIKSTYGVIKDWEGDPCIPRAYPWSGIGCSNESTPRIISLNLSSSGLTGDISPDISNLTALQILDLSNNSLTGKLPDSLSKLSNLKVLNLKNNNLSCPIELKDSSISLSVECNNEKVVEKEKEKNKNKVVIPVVASIGGLLVIAVIAGIVFWIARSKGKQQGKDVLEMDHPETNINVGGSSMETRSRQFTYAEVVRVTNNFARILGRGSFGAVYHGLVDDIQVAVKMLAPSAIQGHDQFKAEEWYLNEGTHLSLIYEYMANGSLAQRLSEISSRVISWEDRVRIAMDAAQVSCKPVILKSQGQDSIHIIKWVGSMVAQGDIRNIADPRLKGEYNIHSIRKAVEVAMACVSVNSDRRPTMNQVVAELKGCLATELNRTPDSQPSHSTESMEMTSIYMVLPPQSGPMAR | 1684 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 71729185 | 71743329 | - | Hsped.03g14900.1 | Hepe03g1490 | 566488 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe03g1490 | 1684 | Gene3D | Phosphorylase Kinase; domain 1 | 1457 | 1537 | - | - | |
Hepe03g1490 | 1684 | FunFam | Leucine-rich repeat receptor-like kinase | 367 | 490 | - | - | |
Hepe03g1490 | 1684 | FunFam | Leucine-rich repeat receptor-like protein kinase | 549 | 651 | - | - | |
Hepe03g1490 | 1684 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 697 | 709 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe03g1490 | 1684 | Gene3D | Phosphorylase Kinase; domain 1 | 564 | 651 | - | - | |
Hepe03g1490 | 1684 | SUPERFAMILY | Protein kinase-like (PK-like) | 1460 | 1567 | IPR011009 | - | |
Hepe03g1490 | 1684 | SUPERFAMILY | Protein kinase-like (PK-like) | 1574 | 1670 | IPR011009 | - | |
Hepe03g1490 | 1684 | Pfam | Leucine Rich repeats (2 copies) | 432 | 468 | IPR025875 | - | |
Hepe03g1490 | 1684 | SMART | serkin_6 | 577 | 849 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe03g1490 | 1684 | SMART | LRR_typ_2 | 1335 | 1358 | IPR003591 | - | |
Hepe03g1490 | 1684 | SMART | LRR_typ_2 | 1359 | 1385 | IPR003591 | - | |
Hepe03g1490 | 1684 | SMART | LRR_typ_2 | 454 | 478 | IPR003591 | - | |
Hepe03g1490 | 1684 | SMART | LRR_typ_2 | 430 | 453 | IPR003591 | - | |
Hepe03g1490 | 1684 | Gene3D | Transferase(Phosphotransferase) domain 1 | 652 | 872 | - | - | |
Hepe03g1490 | 1684 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1568 | 1666 | - | - | |
Hepe03g1490 | 1684 | ProSitePatterns | Protein kinases ATP-binding region signature. | 583 | 604 | IPR017441 | GO:0005524(InterPro) | |
Hepe03g1490 | 1684 | SUPERFAMILY | L domain-like | 1298 | 1375 | - | - | |
Hepe03g1490 | 1684 | Gene3D | Ribonuclease Inhibitor | 1274 | 1397 | IPR032675 | - | |
Hepe03g1490 | 1684 | Gene3D | Ribonuclease Inhibitor | 369 | 485 | IPR032675 | - | |
Hepe03g1490 | 1684 | Pfam | Protein tyrosine and serine/threonine kinase | 579 | 845 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe03g1490 | 1684 | PRINTS | Leucine-rich repeat signature | 454 | 467 | - | - | |
Hepe03g1490 | 1684 | PRINTS | Leucine-rich repeat signature | 433 | 446 | - | - | |
Hepe03g1490 | 1684 | FunFam | Leucine-rich repeat receptor-like kinase | 1272 | 1397 | - | - | |
Hepe03g1490 | 1684 | SUPERFAMILY | L domain-like | 391 | 480 | - | - | |
Hepe03g1490 | 1684 | FunFam | LRR receptor-like serine/threonine-protein kinase IOS1 | 652 | 858 | - | - | |
Hepe03g1490 | 1684 | PANTHER | OS07G0107800 PROTEIN-RELATED | 23 | 854 | - | - | |
Hepe03g1490 | 1684 | Pfam | Malectin-like domain | 939 | 1259 | IPR024788 | - | |
Hepe03g1490 | 1684 | Pfam | Malectin-like domain | 34 | 353 | IPR024788 | - | |
Hepe03g1490 | 1684 | SUPERFAMILY | Protein kinase-like (PK-like) | 556 | 845 | IPR011009 | - | |
Hepe03g1490 | 1684 | ProSiteProfiles | Leucine-rich repeat profile. | 432 | 454 | IPR001611 | GO:0005515(InterPro) | |
Hepe03g1490 | 1684 | Pfam | Leucine rich repeat | 1316 | 1372 | IPR001611 | GO:0005515(InterPro) | |
Hepe03g1490 | 1684 | ProSiteProfiles | Protein kinase domain profile. | 577 | 849 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe03g1490 | 1684 | ProSitePatterns | Protein kinases ATP-binding region signature. | 1482 | 1503 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g1519 | Hepe-Chr1:80407148 | Hepe03g1490 | Hepe-Chr3:71729185 | 8.06e-249 | dispersed | |
Hepe02g1458 | Hepe-Chr2:18671835 | Hepe03g1490 | Hepe-Chr3:71729185 | 7.61e-93 | dispersed | |
Hepe02g1462 | Hepe-Chr2:18791422 | Hepe03g1490 | Hepe-Chr3:71729185 | 2.78e-247 | dispersed | |
Hepe02g1463 | Hepe-Chr2:18799846 | Hepe03g1490 | Hepe-Chr3:71729185 | 1.30e-229 | dispersed | |
Hepe03g1488 | Hepe-Chr3:71709024 | Hepe03g1490 | Hepe-Chr3:71729185 | 2.06e-231 | dispersed | |
Hepe03g1490 | Hepe-Chr3:71729185 | Hepe03g1492 | Hepe-Chr3:71763327 | 0.0 | dispersed | |
Hepe03g1489 | Hepe-Chr3:71721684 | Hepe03g1490 | Hepe-Chr3:71729185 | 5.88e-212 | tandem | |
Hepe03g1490 | Hepe-Chr3:71729185 | Hepe03g1491 | Hepe-Chr3:71748266 | 1.77e-30 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72670 | PF12819 | Malectin_like | 6.90E-101 | CL0202 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe03g1490 | - | - | - | 0.0 |