Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1492 ATGGATGTTTCAACACATTTGCTCTTTGCTTTTGCTTTTCTGGGTGGCCTAGTTCATGCTCAAGCTCAATTAGGTTTCATTAGCTTAGACTGTGGATTGCCAGCAGATACAAACTACATCGAACCAACATTAAAACTTCAATTTACTTCTGATGCTCCTTATATAAACAGTGGTGTAAGTAAAACGTTATCCTCTAATTATCAAGATTTTCTAGAACAACAATATCATCATGTTAGAAGCTTTCCAGAAGGCCGCAGGAATTGTTACAGTATAAATGTGAAGAAGAATACCAAATATTTGATGCGAGCAAGTTTCTTGTATGGAAACTATGATGGGCTCAACCAACTACCGAAATTTGATCTCTACTTTGGAGATAGCTTATGGAAGACCATGAATTTTACTAATGAATACACTGATGCCACAACAGATTCCTTACATGTCACCTCAGACAATCAAGTACAAATTTGTCTTGTCAACACAAACAATGGAACTCCATTCATCTCTTCATTGGAATTCAGACCTTTGCCTAATGAGACTTATAAGTTCTTGAGTAGATCCTTGTTGCTTTACAATCGATTAGATTTGGGTACAACAACCAATAAAACATACAGGTTTCCCGATGATATATATGATCGATTTTGGGTGCCTTTCAATTGGTACGAGTGGACAAGCATAAGCACGACGCTCACAATAGATTCAGATCAAAATAACTATTACCAGCCAGGGTCTGCTATCATGGGAACTGCAGCTATTAGAATAAATACAAATAAGCCAATGGAAATTTGGTGGGAGCCTGAAGATGAAAACACAGAATATTATGTATACATGCACTTTGCTGAAATTGAAAAGCTACAAGCCAATGAATCTAGAGGATTTAATGTCACTTATAATGGGAGTTTTTGGTATGGTCCTCTAATTCCCAGCTATTTAAACACCTTAACCCTTTTTAGTCGAGGACCATTACCAACACCAAATAAAAAGCATTTATTTTCACTTATTCCAATTGAAAATGCAACACATCCTCCAATTATGAATGCTATGGAAATTTACTCTGTTATAGATCTCTCAGAACTGACTTCAGATCAAGATGATGTGGATGCAATAAAAAGTGTAAAGTCAACTTATGGAATACTCAAAGATTGGGAAGGAGATCCATGTGTTCCAAGAGCATACCCTTGGGAGGGTATAGACTGTACCAAAACCAATGGAACTACTCCTAGAATTTTGTCTTTGAATTTGTCATCGAGTGGATTGGCAGGGGGGATTTCTCCAAATATATACAGTCTAAAAATGTTACAAATTTTGGACTTGTCAAACAATAACTTGACAGGAAATATCCCAGATTTTCTGTCTGATTTATCAAACCTTCAAGTATTAAAGTTAGATAACAACAATCTCACAGGCTCTGTTCCATCTGAACTGATTAAGAGACTCAACAATGGTTCATTATCATCATTAAGCTTTGAAGGAAATCCAAATCTAGATTGTATATCAGATTCATGCAAGAGTAAGAAGAAGAACAGTGTTGTTATTCCAATTGTAGCAGCAATTGGTGGATTGATACTCGTAGTTGTAATTTCAATCATCATTCTTTGGATTGTTAAATCAAGAAAGATCAAAACACAACAAAATGAAACTGTTGTTTCAAAGATGAATCACTCAGGAACCAGCAACCAAATAAGTGATCAGTTTTTAGAGACAAGGGGGAGACAGTTCACATATTCAGAAGTCTTGAAAATGACTAATAATTTTGAGAGAGTTTTGGGAAAAGGAGGTTTTGGGATGGTTTATTATGGTGTCACAGATGACATTCAAGTGGCTGTGAAGATGCTTTCTCAAGCTTCAAGTCAAGGTTATCAACAGTTTCAAGCAGAGGTTACACTTCTTTTAAGAGTTCATCACAAAAACTTGACAAATCTTGTGGGGTATTTGAATGAAGGAGACCGTCTTGGCCTCATTTATGAATTCATGGCCCATGGAAACTTAGCAGAGCATCTTTCAGAGAATAGCTCATATGTCCTAAGTTGGCAAGATAGGCTCCGGATAGCCATGGATGCAGCCCAAGGATTGGAGTACCTGCACGATGGTTGCAAGCCGCCCATAATCCACAGAGATGTGAAGACAACAAACATCTTATTGACAGAAAAATTGCAAGCCAAACTTGCAGATTTTGGCTTGTCCAAAAGCTTCCCAGCAGATAGCAGCAACAACAACAACAGTAACAACTACATGTCCACCATTGTTGCTGGCACCCCTGGTTACCTTGATCCAGAGTACTACCTATCGAATCGTCTGACGGAGAAAAGCGATGTGTACAGCTTCGGAATCGCTCTGATGGAGATAATCAGCTGCAGAGAAGTGATATCAAGAAGTGAAGAAAACGTTCATATAAGTAAATGGGCAAACAGCATGGTAGCTAAAGGAGACATAAATGGAATAGTTGATGAAAGATTGAGAGGAAAATATGATGTGAACTCAGTTTGGAAGGCAGTGGAAATAGCTTTGAATTGTGTATCTGGGAAATCTGCAAAAAGACCAACAATGAGCCAAGTGATGGCGGAGCTGAAGAGCTGTTTGGCCATAGAAATGGAGCGGACCCCGGAGAGTCGAGGTTTTGAATCGACGAATTCTTTCAACGTGATTTCTACTGTTATGGATTACAGTGGTTCTGGTCCAATGGCGAGGTGA 2688 38.21 MDVSTHLLFAFAFLGGLVHAQAQLGFISLDCGLPADTNYIEPTLKLQFTSDAPYINSGVSKTLSSNYQDFLEQQYHHVRSFPEGRRNCYSINVKKNTKYLMRASFLYGNYDGLNQLPKFDLYFGDSLWKTMNFTNEYTDATTDSLHVTSDNQVQICLVNTNNGTPFISSLEFRPLPNETYKFLSRSLLLYNRLDLGTTTNKTYRFPDDIYDRFWVPFNWYEWTSISTTLTIDSDQNNYYQPGSAIMGTAAIRINTNKPMEIWWEPEDENTEYYVYMHFAEIEKLQANESRGFNVTYNGSFWYGPLIPSYLNTLTLFSRGPLPTPNKKHLFSLIPIENATHPPIMNAMEIYSVIDLSELTSDQDDVDAIKSVKSTYGILKDWEGDPCVPRAYPWEGIDCTKTNGTTPRILSLNLSSSGLAGGISPNIYSLKMLQILDLSNNNLTGNIPDFLSDLSNLQVLKLDNNNLTGSVPSELIKRLNNGSLSSLSFEGNPNLDCISDSCKSKKKNSVVIPIVAAIGGLILVVVISIIILWIVKSRKIKTQQNETVVSKMNHSGTSNQISDQFLETRGRQFTYSEVLKMTNNFERVLGKGGFGMVYYGVTDDIQVAVKMLSQASSQGYQQFQAEVTLLLRVHHKNLTNLVGYLNEGDRLGLIYEFMAHGNLAEHLSENSSYVLSWQDRLRIAMDAAQGLEYLHDGCKPPIIHRDVKTTNILLTEKLQAKLADFGLSKSFPADSSNNNNSNNYMSTIVAGTPGYLDPEYYLSNRLTEKSDVYSFGIALMEIISCREVISRSEENVHISKWANSMVAKGDINGIVDERLRGKYDVNSVWKAVEIALNCVSGKSAKRPTMSQVMAELKSCLAIEMERTPESRGFESTNSFNVISTVMDYSGSGPMAR 895
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 71763327 71769171 - Hsped.03g14920.1 Hepe03g1492 566490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1492 895 ProSitePatterns Protein kinases ATP-binding region signature. 588 609 IPR017441 GO:0005524(InterPro)
Hepe03g1492 895 SMART serkin_6 582 859 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g1492 895 Pfam Leucine Rich Repeat 432 453 IPR001611 GO:0005515(InterPro)
Hepe03g1492 895 Pfam Leucine Rich Repeat 455 474 IPR001611 GO:0005515(InterPro)
Hepe03g1492 895 Gene3D Transferase(Phosphotransferase) domain 1 657 876 - -
Hepe03g1492 895 ProSiteProfiles Protein kinase domain profile. 582 859 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g1492 895 Pfam Malectin-like domain 29 352 IPR024788 -
Hepe03g1492 895 Gene3D Ribonuclease Inhibitor 365 491 IPR032675 -
Hepe03g1492 895 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 657 868 - -
Hepe03g1492 895 SUPERFAMILY L domain-like 390 499 - -
Hepe03g1492 895 SUPERFAMILY Protein kinase-like (PK-like) 558 855 IPR011009 -
Hepe03g1492 895 PANTHER OS07G0107800 PROTEIN-RELATED 19 863 - -
Hepe03g1492 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 701 713 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g1492 895 FunFam Leucine-rich repeat receptor-like protein kinase 557 656 - -
Hepe03g1492 895 Pfam Protein tyrosine and serine/threonine kinase 584 855 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g1492 895 ProSiteProfiles Leucine-rich repeat profile. 431 454 IPR001611 GO:0005515(InterPro)
Hepe03g1492 895 Gene3D Phosphorylase Kinase; domain 1 569 656 - -
Hepe03g1492 895 FunFam Leucine-rich repeat receptor-like kinase 363 497 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1489 Hepe-Chr3:71721684 Hepe03g1492 Hepe-Chr3:71763327 9.65e-190 dispersed
Hepe03g1490 Hepe-Chr3:71729185 Hepe03g1492 Hepe-Chr3:71763327 0.0 dispersed
Hepe03g1492 Hepe-Chr3:71763327 Hepe03g1501 Hepe-Chr3:71861458 1.19e-253 dispersed
Hepe03g1491 Hepe-Chr3:71748266 Hepe03g1492 Hepe-Chr3:71763327 7.00e-46 tandem
Hepe03g1492 Hepe-Chr3:71763327 Hepe03g1493 Hepe-Chr3:71774366 1.80e-89 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72671 PF12819 Malectin_like 3.70E-110 CL0202 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1492 - - - 0.0