Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1504 ATGGCATTTAGAGGGCGAGGACGAGGACGAGGTGGCGGGGGGGCCTTTCAGTATGCCAAGCAAGAACCCTTCGAGCTTTTCCCGGAGAATGTCACCCTACCGAGCATCAGTGATGTGCCTGAAGAAAAAAGTTTGGTTATTTTCAACTCCAGGTTGCTGAATTATTGGAAGGCCTCTCCTTTTTTTCTAGAGGAGAATGTCATGAAAAAGATGCAGAAAACCGAGATAGAGAAATTTTCCGATAGATCCAAGTCGAATAGTGCGTTGAAGCGTGATTCCCTCGCACAAATTCTACAGCTCACATCGAGGAACTTTCCTGAAGAATTGGTTGAAGGTTTCAAAGGAAAGTTGCGGAACAAACGAAAAGTTCAATGGAATCCCGCGTCAGGGCTGCAAAAATTGGACTTTCTCGAGAAGCGTGAAGAATCTCTCAAGGGACAGGAGAATGATGGTAAGGAGAAGAAAGAAGGAGAAGAAGGTGAAGACGAAGACGAAGAAGAAGATGCACAGTCCGAAGAACTTACCGATGATGATTATTATCAGAACGAACACTTCGACGATGATGAAGACGATTACAACATGGAAGATGATGGTGCAGAGCAAAAAGCTAATCAACGCAAGAGTTTGAAGAGCAACAAGAAGAAGAAGAAGAAGAAGAAGCGAACCAGAGAGATTTTTCTGAAGCTAATCCAAATCCCAAGCTTGACAATGTCGTGGCAAACATACGTCGATGATCACCTCATGTGCGAGATCGAAGGCAACCATCTCACCTCCGCCGCCATCATCGGCCACGATGCCTCTGTTTGGGCGCAGAGCTCCGCTTTCCCTCAGTTTAAGCCGGATGAGATTTCCGCGATCATGAAGGATTTTGATGAGCCTGGTTCTCTTGCCCCAACTGGTTTACACCTTGGTGGCGTTAAATACATGGTTATCCAGGGAGAGCCTGGAGCTGTTGTTCGTGGCAAGAAGGGATCTGGAGGAATCACTGTGAAGAAAACTGAGAAAGCAGTGATTATTGGACTGTATGATGAACCTTTGACTCCAGGACAATGCAATATGGTTGTTGAAAGGTTGGGAGATTACCTCGTCGAACAGGGCTTGTAG 1104 46.11 MAFRGRGRGRGGGGAFQYAKQEPFELFPENVTLPSISDVPEEKSLVIFNSRLLNYWKASPFFLEENVMKKMQKTEIEKFSDRSKSNSALKRDSLAQILQLTSRNFPEELVEGFKGKLRNKRKVQWNPASGLQKLDFLEKREESLKGQENDGKEKKEGEEGEDEDEEEDAQSEELTDDDYYQNEHFDDDEDDYNMEDDGAEQKANQRKSLKSNKKKKKKKKRTREIFLKLIQIPSLTMSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSSAFPQFKPDEISAIMKDFDEPGSLAPTGLHLGGVKYMVIQGEPGAVVRGKKGSGGITVKKTEKAVIIGLYDEPLTPGQCNMVVERLGDYLVEQGL 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 71886176 71892636 + Hsped.03g15040.1 Hepe03g1504 566502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1504 367 FunFam Profilin 237 367 - -
Hepe03g1504 367 PANTHER DNA-DIRECTED RNA POLYMERASE III 1 201 IPR024661 GO:0005666(PANTHER)|GO:0006383(InterPro)
Hepe03g1504 367 Coils Coil 199 219 - -
Hepe03g1504 367 MobiDBLite consensus disorder prediction 157 196 - -
Hepe03g1504 367 SMART prof_2 237 367 IPR005455 GO:0003779(InterPro)
Hepe03g1504 367 CDD PROF 238 366 IPR005455 GO:0003779(InterPro)
Hepe03g1504 367 MobiDBLite consensus disorder prediction 143 217 - -
Hepe03g1504 367 Pfam DNA-directed RNA polymerase III subunit Rpc31 19 195 IPR024661 GO:0006383(InterPro)
Hepe03g1504 367 Pfam Profilin 237 366 IPR048278 GO:0003779(InterPro)
Hepe03g1504 367 Gene3D Dynein light chain 2a, cytoplasmic 236 367 - -
Hepe03g1504 367 SUPERFAMILY Profilin (actin-binding protein) 238 366 IPR036140 -
Hepe03g1504 367 PRINTS Profilin signature 257 266 IPR005455 GO:0003779(InterPro)
Hepe03g1504 367 PRINTS Profilin signature 276 296 IPR005455 GO:0003779(InterPro)
Hepe03g1504 367 PRINTS Profilin signature 349 366 IPR005455 GO:0003779(InterPro)
Hepe03g1504 367 PRINTS Profilin signature 300 314 IPR005455 GO:0003779(InterPro)
Hepe03g1504 367 PRINTS Profilin signature 336 349 IPR005455 GO:0003779(InterPro)
Hepe03g1504 367 PRINTS Profilin signature 239 248 IPR005455 GO:0003779(InterPro)
Hepe03g1504 367 PRINTS Plant profilin signature 340 353 IPR005455 GO:0003779(InterPro)
Hepe03g1504 367 PRINTS Plant profilin signature 307 316 IPR005455 GO:0003779(InterPro)
Hepe03g1504 367 PRINTS Plant profilin signature 263 276 IPR005455 GO:0003779(InterPro)
Hepe03g1504 367 PRINTS Plant profilin signature 353 366 IPR005455 GO:0003779(InterPro)
Hepe03g1504 367 PRINTS Plant profilin signature 320 335 IPR005455 GO:0003779(InterPro)
Hepe03g1504 367 PRINTS Plant profilin signature 288 302 IPR005455 GO:0003779(InterPro)
Hepe03g1504 367 PRINTS Plant profilin signature 237 250 IPR005455 GO:0003779(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1504 Hepe-Chr3:71886176 Hepe08g2631 Hepe-Chr8:68269820 1.25e-74 dispersed
Hepe02g1450 Hepe-Chr2:18595407 Hepe03g1504 Hepe-Chr3:71886176 6.31e-75 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1504 K05759 - csv:101204777 279.256