Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe03g1504 | ATGGCATTTAGAGGGCGAGGACGAGGACGAGGTGGCGGGGGGGCCTTTCAGTATGCCAAGCAAGAACCCTTCGAGCTTTTCCCGGAGAATGTCACCCTACCGAGCATCAGTGATGTGCCTGAAGAAAAAAGTTTGGTTATTTTCAACTCCAGGTTGCTGAATTATTGGAAGGCCTCTCCTTTTTTTCTAGAGGAGAATGTCATGAAAAAGATGCAGAAAACCGAGATAGAGAAATTTTCCGATAGATCCAAGTCGAATAGTGCGTTGAAGCGTGATTCCCTCGCACAAATTCTACAGCTCACATCGAGGAACTTTCCTGAAGAATTGGTTGAAGGTTTCAAAGGAAAGTTGCGGAACAAACGAAAAGTTCAATGGAATCCCGCGTCAGGGCTGCAAAAATTGGACTTTCTCGAGAAGCGTGAAGAATCTCTCAAGGGACAGGAGAATGATGGTAAGGAGAAGAAAGAAGGAGAAGAAGGTGAAGACGAAGACGAAGAAGAAGATGCACAGTCCGAAGAACTTACCGATGATGATTATTATCAGAACGAACACTTCGACGATGATGAAGACGATTACAACATGGAAGATGATGGTGCAGAGCAAAAAGCTAATCAACGCAAGAGTTTGAAGAGCAACAAGAAGAAGAAGAAGAAGAAGAAGCGAACCAGAGAGATTTTTCTGAAGCTAATCCAAATCCCAAGCTTGACAATGTCGTGGCAAACATACGTCGATGATCACCTCATGTGCGAGATCGAAGGCAACCATCTCACCTCCGCCGCCATCATCGGCCACGATGCCTCTGTTTGGGCGCAGAGCTCCGCTTTCCCTCAGTTTAAGCCGGATGAGATTTCCGCGATCATGAAGGATTTTGATGAGCCTGGTTCTCTTGCCCCAACTGGTTTACACCTTGGTGGCGTTAAATACATGGTTATCCAGGGAGAGCCTGGAGCTGTTGTTCGTGGCAAGAAGGGATCTGGAGGAATCACTGTGAAGAAAACTGAGAAAGCAGTGATTATTGGACTGTATGATGAACCTTTGACTCCAGGACAATGCAATATGGTTGTTGAAAGGTTGGGAGATTACCTCGTCGAACAGGGCTTGTAG | 1104 | 46.11 | MAFRGRGRGRGGGGAFQYAKQEPFELFPENVTLPSISDVPEEKSLVIFNSRLLNYWKASPFFLEENVMKKMQKTEIEKFSDRSKSNSALKRDSLAQILQLTSRNFPEELVEGFKGKLRNKRKVQWNPASGLQKLDFLEKREESLKGQENDGKEKKEGEEGEDEDEEEDAQSEELTDDDYYQNEHFDDDEDDYNMEDDGAEQKANQRKSLKSNKKKKKKKKRTREIFLKLIQIPSLTMSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSSAFPQFKPDEISAIMKDFDEPGSLAPTGLHLGGVKYMVIQGEPGAVVRGKKGSGGITVKKTEKAVIIGLYDEPLTPGQCNMVVERLGDYLVEQGL | 367 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 71886176 | 71892636 | + | Hsped.03g15040.1 | Hepe03g1504 | 566502 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe03g1504 | 367 | FunFam | Profilin | 237 | 367 | - | - | |
Hepe03g1504 | 367 | PANTHER | DNA-DIRECTED RNA POLYMERASE III | 1 | 201 | IPR024661 | GO:0005666(PANTHER)|GO:0006383(InterPro) | |
Hepe03g1504 | 367 | Coils | Coil | 199 | 219 | - | - | |
Hepe03g1504 | 367 | MobiDBLite | consensus disorder prediction | 157 | 196 | - | - | |
Hepe03g1504 | 367 | SMART | prof_2 | 237 | 367 | IPR005455 | GO:0003779(InterPro) | |
Hepe03g1504 | 367 | CDD | PROF | 238 | 366 | IPR005455 | GO:0003779(InterPro) | |
Hepe03g1504 | 367 | MobiDBLite | consensus disorder prediction | 143 | 217 | - | - | |
Hepe03g1504 | 367 | Pfam | DNA-directed RNA polymerase III subunit Rpc31 | 19 | 195 | IPR024661 | GO:0006383(InterPro) | |
Hepe03g1504 | 367 | Pfam | Profilin | 237 | 366 | IPR048278 | GO:0003779(InterPro) | |
Hepe03g1504 | 367 | Gene3D | Dynein light chain 2a, cytoplasmic | 236 | 367 | - | - | |
Hepe03g1504 | 367 | SUPERFAMILY | Profilin (actin-binding protein) | 238 | 366 | IPR036140 | - | |
Hepe03g1504 | 367 | PRINTS | Profilin signature | 257 | 266 | IPR005455 | GO:0003779(InterPro) | |
Hepe03g1504 | 367 | PRINTS | Profilin signature | 276 | 296 | IPR005455 | GO:0003779(InterPro) | |
Hepe03g1504 | 367 | PRINTS | Profilin signature | 349 | 366 | IPR005455 | GO:0003779(InterPro) | |
Hepe03g1504 | 367 | PRINTS | Profilin signature | 300 | 314 | IPR005455 | GO:0003779(InterPro) | |
Hepe03g1504 | 367 | PRINTS | Profilin signature | 336 | 349 | IPR005455 | GO:0003779(InterPro) | |
Hepe03g1504 | 367 | PRINTS | Profilin signature | 239 | 248 | IPR005455 | GO:0003779(InterPro) | |
Hepe03g1504 | 367 | PRINTS | Plant profilin signature | 340 | 353 | IPR005455 | GO:0003779(InterPro) | |
Hepe03g1504 | 367 | PRINTS | Plant profilin signature | 307 | 316 | IPR005455 | GO:0003779(InterPro) | |
Hepe03g1504 | 367 | PRINTS | Plant profilin signature | 263 | 276 | IPR005455 | GO:0003779(InterPro) | |
Hepe03g1504 | 367 | PRINTS | Plant profilin signature | 353 | 366 | IPR005455 | GO:0003779(InterPro) | |
Hepe03g1504 | 367 | PRINTS | Plant profilin signature | 320 | 335 | IPR005455 | GO:0003779(InterPro) | |
Hepe03g1504 | 367 | PRINTS | Plant profilin signature | 288 | 302 | IPR005455 | GO:0003779(InterPro) | |
Hepe03g1504 | 367 | PRINTS | Plant profilin signature | 237 | 250 | IPR005455 | GO:0003779(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g1504 | Hepe-Chr3:71886176 | Hepe08g2631 | Hepe-Chr8:68269820 | 1.25e-74 | dispersed | |
Hepe02g1450 | Hepe-Chr2:18595407 | Hepe03g1504 | Hepe-Chr3:71886176 | 6.31e-75 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe03g1504 | K05759 | - | csv:101204777 | 279.256 |