Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe03g1505 | ATGGGGAAAGCTACCAGATGGCTGAAGGGTCTATTAGGGATGAAAAAGGAGAAAGACCCATCTGGGAATTCAAATTCAAATTCGACCCCCGTCGCCGCCAATAGAAAGGAGAAGAAAAGATGGAGTTTTGCAAAGTCTGGCAGAGATTCCGGTCAAACGCCGCCGCCTGCGGCGGTGGAACCTTCTTGGTTCAGATCATATGTTTCTGATTCGGAGAAAGAGCAGAACAAGCACGCAATTGCGGTGGCTGCAGCTACCGCTGCCGCTGCTGATGCCGCCGTGGCGGCGGCGCAGGCGGCGGTTGCGGTGGTCCGGCTGACGAGTCAAGGAAGAGGGTCTCTGTATATCACTGGAAGAGATAGATGGGCTGCTGTGAAGATTCAAACAGTTTTTAGGGGCTATTTGGCTCGAAAGGCCCTGAGAGCTCTCAAAGGGCTTGTCAAATTGCAGGCTGTGGTTAGGGGATTTCTTGTTAGAAAAAGAGCTGCTGCAACTCTTCATAGTATGCAGGCTCTTTTTAGAGCTCAAACTGCTGTTAGAACTCAAAGAGCTCGTCGATCCTTCAACAAAGAGAATAGGTTTATCCCCGAGATTCGTCCCCGAAAATCTGCGGAAAGGTTTGATGAAACAAGAAGTGAATTCCATAGTAAGAGGTTGTCTATAGCATCATCCTATGAAACCTGCATGAACTCATTGGATGAGAGCCCGAAAATCGTCGAAATCGACACCTACAGAACCCGATCGAGGTCATCTCGTAGGTACATCTCGGCATTGTCCGAATACGTTGGAGATGATGTACCTCTCCAAACAATCTCTTCGCCATTATTGCCATGTCCGTATCGACCTCGCGTGTCTGCACCCCCCGAATGCCACAATTTGGTTCGAGACTTCGAATGGTGCTTGATGGGCGACGACTGCAAGTTCCCTACAGCGCACAGCACGCCTCGCTTATCGAATTCATTCGCCTCCGCCAACGTACCAATCACCCCGTCGAAGAGCGTGTGTGGCGACAGCTTCTTTAGGCCATACATGAACTGCCCGAATTATATGGCGAACACGCAATCATTCAAGGCGAAATTGAGGTCTCAAAGTGCCCCAAAGCAAAGGCCAGAGCCGGGCTCGAAGAAGAAGCTATCATTGAATGAAATGATGGCAGCAAGAAACAGTTTAAGCAGTGTAAGAATGCAAAGACCAAGTAACCAAATGCTGCAAGAAGAAGATGAAGATGAAGAAGAAGAAGAAGAAGAACAAGAAGAAGCACCATATGTTTACTGA | 1275 | 48.78 | MGKATRWLKGLLGMKKEKDPSGNSNSNSTPVAANRKEKKRWSFAKSGRDSGQTPPPAAVEPSWFRSYVSDSEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGSLYITGRDRWAAVKIQTVFRGYLARKALRALKGLVKLQAVVRGFLVRKRAAATLHSMQALFRAQTAVRTQRARRSFNKENRFIPEIRPRKSAERFDETRSEFHSKRLSIASSYETCMNSLDESPKIVEIDTYRTRSRSSRRYISALSEYVGDDVPLQTISSPLLPCPYRPRVSAPPECHNLVRDFEWCLMGDDCKFPTAHSTPRLSNSFASANVPITPSKSVCGDSFFRPYMNCPNYMANTQSFKAKLRSQSAPKQRPEPGSKKKLSLNEMMAARNSLSSVRMQRPSNQMLQEEDEDEEEEEEEQEEAPYVY | 424 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 71899178 | 71901550 | - | Hsped.03g15050.1 | Hepe03g1505 | 566503 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe03g1505 | 424 | PANTHER | IQ-DOMAIN 5-RELATED | 6 | 397 | - | - | |
Hepe03g1505 | 424 | Pfam | IQ calmodulin-binding motif | 121 | 141 | IPR000048 | GO:0005515(InterPro) | |
Hepe03g1505 | 424 | Pfam | IQ calmodulin-binding motif | 147 | 161 | IPR000048 | GO:0005515(InterPro) | |
Hepe03g1505 | 424 | MobiDBLite | consensus disorder prediction | 358 | 424 | - | - | |
Hepe03g1505 | 424 | MobiDBLite | consensus disorder prediction | 384 | 400 | - | - | |
Hepe03g1505 | 424 | Gene3D | - | 62 | 146 | - | - | |
Hepe03g1505 | 424 | ProSiteProfiles | IQ motif profile. | 120 | 148 | - | - | |
Hepe03g1505 | 424 | SMART | iq_5 | 142 | 163 | IPR000048 | GO:0005515(InterPro) | |
Hepe03g1505 | 424 | SMART | iq_5 | 119 | 141 | IPR000048 | GO:0005515(InterPro) | |
Hepe03g1505 | 424 | Coils | Coil | 399 | 420 | - | - | |
Hepe03g1505 | 424 | MobiDBLite | consensus disorder prediction | 1 | 59 | - | - | |
Hepe03g1505 | 424 | ProSiteProfiles | Zinc finger C3H1-type profile. | 285 | 315 | IPR000571 | GO:0046872(InterPro) | |
Hepe03g1505 | 424 | Pfam | Protein of unknown function (DUF4005) | 315 | 397 | IPR025064 | - | |
Hepe03g1505 | 424 | ProSiteProfiles | IQ motif profile. | 144 | 171 | - | - | |
Hepe03g1505 | 424 | MobiDBLite | consensus disorder prediction | 404 | 424 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g0219 | Hepe-Chr3:2774671 | Hepe03g1505 | Hepe-Chr3:71899178 | 1.60e-19 | dispersed | |
Hepe03g1505 | Hepe-Chr3:71899178 | Hepe05g1582 | Hepe-Chr5:65441882 | 1.18e-26 | dispersed | |
Hepe02g1447 | Hepe-Chr2:18573637 | Hepe03g1505 | Hepe-Chr3:71899178 | 2.11e-80 | wgd | |
Hepe03g1505 | Hepe-Chr3:71899178 | Hepe09g0820 | Hepe-Chr9:8029246 | 3.64e-99 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe03g1505 | - | - | - | 0.0 |