Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1505 ATGGGGAAAGCTACCAGATGGCTGAAGGGTCTATTAGGGATGAAAAAGGAGAAAGACCCATCTGGGAATTCAAATTCAAATTCGACCCCCGTCGCCGCCAATAGAAAGGAGAAGAAAAGATGGAGTTTTGCAAAGTCTGGCAGAGATTCCGGTCAAACGCCGCCGCCTGCGGCGGTGGAACCTTCTTGGTTCAGATCATATGTTTCTGATTCGGAGAAAGAGCAGAACAAGCACGCAATTGCGGTGGCTGCAGCTACCGCTGCCGCTGCTGATGCCGCCGTGGCGGCGGCGCAGGCGGCGGTTGCGGTGGTCCGGCTGACGAGTCAAGGAAGAGGGTCTCTGTATATCACTGGAAGAGATAGATGGGCTGCTGTGAAGATTCAAACAGTTTTTAGGGGCTATTTGGCTCGAAAGGCCCTGAGAGCTCTCAAAGGGCTTGTCAAATTGCAGGCTGTGGTTAGGGGATTTCTTGTTAGAAAAAGAGCTGCTGCAACTCTTCATAGTATGCAGGCTCTTTTTAGAGCTCAAACTGCTGTTAGAACTCAAAGAGCTCGTCGATCCTTCAACAAAGAGAATAGGTTTATCCCCGAGATTCGTCCCCGAAAATCTGCGGAAAGGTTTGATGAAACAAGAAGTGAATTCCATAGTAAGAGGTTGTCTATAGCATCATCCTATGAAACCTGCATGAACTCATTGGATGAGAGCCCGAAAATCGTCGAAATCGACACCTACAGAACCCGATCGAGGTCATCTCGTAGGTACATCTCGGCATTGTCCGAATACGTTGGAGATGATGTACCTCTCCAAACAATCTCTTCGCCATTATTGCCATGTCCGTATCGACCTCGCGTGTCTGCACCCCCCGAATGCCACAATTTGGTTCGAGACTTCGAATGGTGCTTGATGGGCGACGACTGCAAGTTCCCTACAGCGCACAGCACGCCTCGCTTATCGAATTCATTCGCCTCCGCCAACGTACCAATCACCCCGTCGAAGAGCGTGTGTGGCGACAGCTTCTTTAGGCCATACATGAACTGCCCGAATTATATGGCGAACACGCAATCATTCAAGGCGAAATTGAGGTCTCAAAGTGCCCCAAAGCAAAGGCCAGAGCCGGGCTCGAAGAAGAAGCTATCATTGAATGAAATGATGGCAGCAAGAAACAGTTTAAGCAGTGTAAGAATGCAAAGACCAAGTAACCAAATGCTGCAAGAAGAAGATGAAGATGAAGAAGAAGAAGAAGAAGAACAAGAAGAAGCACCATATGTTTACTGA 1275 48.78 MGKATRWLKGLLGMKKEKDPSGNSNSNSTPVAANRKEKKRWSFAKSGRDSGQTPPPAAVEPSWFRSYVSDSEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGSLYITGRDRWAAVKIQTVFRGYLARKALRALKGLVKLQAVVRGFLVRKRAAATLHSMQALFRAQTAVRTQRARRSFNKENRFIPEIRPRKSAERFDETRSEFHSKRLSIASSYETCMNSLDESPKIVEIDTYRTRSRSSRRYISALSEYVGDDVPLQTISSPLLPCPYRPRVSAPPECHNLVRDFEWCLMGDDCKFPTAHSTPRLSNSFASANVPITPSKSVCGDSFFRPYMNCPNYMANTQSFKAKLRSQSAPKQRPEPGSKKKLSLNEMMAARNSLSSVRMQRPSNQMLQEEDEDEEEEEEEQEEAPYVY 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 71899178 71901550 - Hsped.03g15050.1 Hepe03g1505 566503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1505 424 PANTHER IQ-DOMAIN 5-RELATED 6 397 - -
Hepe03g1505 424 Pfam IQ calmodulin-binding motif 121 141 IPR000048 GO:0005515(InterPro)
Hepe03g1505 424 Pfam IQ calmodulin-binding motif 147 161 IPR000048 GO:0005515(InterPro)
Hepe03g1505 424 MobiDBLite consensus disorder prediction 358 424 - -
Hepe03g1505 424 MobiDBLite consensus disorder prediction 384 400 - -
Hepe03g1505 424 Gene3D - 62 146 - -
Hepe03g1505 424 ProSiteProfiles IQ motif profile. 120 148 - -
Hepe03g1505 424 SMART iq_5 142 163 IPR000048 GO:0005515(InterPro)
Hepe03g1505 424 SMART iq_5 119 141 IPR000048 GO:0005515(InterPro)
Hepe03g1505 424 Coils Coil 399 420 - -
Hepe03g1505 424 MobiDBLite consensus disorder prediction 1 59 - -
Hepe03g1505 424 ProSiteProfiles Zinc finger C3H1-type profile. 285 315 IPR000571 GO:0046872(InterPro)
Hepe03g1505 424 Pfam Protein of unknown function (DUF4005) 315 397 IPR025064 -
Hepe03g1505 424 ProSiteProfiles IQ motif profile. 144 171 - -
Hepe03g1505 424 MobiDBLite consensus disorder prediction 404 424 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0219 Hepe-Chr3:2774671 Hepe03g1505 Hepe-Chr3:71899178 1.60e-19 dispersed
Hepe03g1505 Hepe-Chr3:71899178 Hepe05g1582 Hepe-Chr5:65441882 1.18e-26 dispersed
Hepe02g1447 Hepe-Chr2:18573637 Hepe03g1505 Hepe-Chr3:71899178 2.11e-80 wgd
Hepe03g1505 Hepe-Chr3:71899178 Hepe09g0820 Hepe-Chr9:8029246 3.64e-99 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1505 - - - 0.0